RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 HERC2O95714 4834 aa12.56□□□□□ -0.4
THRA-202ENST00000394121 PRAC1Q96KF2 57 aa12.55□□□□□ -0.4
THRA-202ENST00000394121 LINC01554Q52M75 96 aa12.55□□□□□ -0.4
THRA-202ENST00000394121 ADM2Q7Z4H4 148 aa12.53□□□□□ -0.4
THRA-202ENST00000394121 KRTAP10-8P60410 259 aa12.5□□□□□ -0.41
THRA-202ENST00000394121 KRTAP3-1Q9BYR8 98 aa12.46□□□□□ -0.41
THRA-202ENST00000394121 DMBT1Q9UGM3 2413 aaPredicted RBP12.45□□□□□ -0.42
THRA-202ENST00000394121 MT1HL1P0DM35 61 aa12.44□□□□□ -0.42
THRA-202ENST00000394121 H0YAA0 97 aa12.35□□□□□ -0.43
THRA-202ENST00000394121 A0A1B0GU33 70 aa12.3□□□□□ -0.44
THRA-202ENST00000394121 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.45
THRA-202ENST00000394121 H1FX-AS1Q4G0G2 97 aa12.25□□□□□ -0.45
THRA-202ENST00000394121 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
THRA-202ENST00000394121 CSAG1Q6PB30 78 aa12.21□□□□□ -0.46
THRA-202ENST00000394121 J3QL48 77 aa12.1□□□□□ -0.47
THRA-202ENST00000394121 RPL37P61927 97 aaKnown RBP11.98□□□□□ -0.49
THRA-202ENST00000394121 HERC1Q15751 4861 aa11.97□□□□□ -0.49
THRA-202ENST00000394121 LPAP08519 4548 aa11.96□□□□□ -0.49
THRA-202ENST00000394121 K7ERS5 55 aa11.94□□□□□ -0.5
THRA-202ENST00000394121 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
THRA-202ENST00000394121 KRTAP25-1Q3LHN0 102 aa11.9□□□□□ -0.5
THRA-202ENST00000394121 XP32Q5T750 250 aa11.89□□□□□ -0.51
THRA-202ENST00000394121 KRTAP10-6P60371 365 aaPredicted RBP11.88□□□□□ -0.51
THRA-202ENST00000394121 S4R3F8 94 aa11.82□□□□□ -0.52
THRA-202ENST00000394121 LRP2P98164 4655 aa11.82□□□□□ -0.52
THRA-202ENST00000394121 KRTAP3-2Q9BYR7 98 aa11.79□□□□□ -0.52
THRA-202ENST00000394121 KRTAP13-4Q3LI77 160 aa11.75□□□□□ -0.53
THRA-202ENST00000394121 ROMO1P60602 79 aa11.74□□□□□ -0.53
THRA-202ENST00000394121 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
THRA-202ENST00000394121 HMCN2Q8NDA2 5059 aa11.66□□□□□ -0.54
THRA-202ENST00000394121 A0A0D9SG42 100 aa11.65□□□□□ -0.55
THRA-202ENST00000394121 CRIPTQ9P021 101 aa11.62□□□□□ -0.55
THRA-202ENST00000394121 P0C880 135 aa11.61□□□□□ -0.55
THRA-202ENST00000394121 MUC2Q02817 5179 aa11.38□□□□□ -0.59
THRA-202ENST00000394121 KRTAP12-2P59991 146 aa11.38□□□□□ -0.59
THRA-202ENST00000394121 KRTAP4-1Q9BYQ7 146 aa11.32□□□□□ -0.6
THRA-202ENST00000394121 KRTAP12-1P59990 96 aa11.32□□□□□ -0.6
THRA-202ENST00000394121 UBR4Q5T4S7 5183 aa11.3□□□□□ -0.6
THRA-202ENST00000394121 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
THRA-202ENST00000394121 M0QZ58 72 aa11.29□□□□□ -0.6
THRA-202ENST00000394121 SPINT4Q6UDR6 99 aa11.27□□□□□ -0.61
THRA-202ENST00000394121 MUC17Q685J3 4493 aa11.24□□□□□ -0.61
THRA-202ENST00000394121 C10orf95Q9H7T3 257 aa11.23□□□□□ -0.61
THRA-202ENST00000394121 RNF213Q63HN8 5207 aa11.16□□□□□ -0.62
THRA-202ENST00000394121 R4GN34 69 aa10.96□□□□□ -0.65
THRA-202ENST00000394121 A0A0A0MQY5 61 aa10.95□□□□□ -0.66
THRA-202ENST00000394121 KRTAP19-2Q3LHN2 52 aa10.92□□□□□ -0.66
THRA-202ENST00000394121 NDUFAF8A1L188 74 aa10.91□□□□□ -0.66
THRA-202ENST00000394121 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
THRA-202ENST00000394121 KRTAP15-1Q3LI76 137 aa10.88□□□□□ -0.67
THRA-202ENST00000394121 LORP23490 312 aaPredicted RBP10.79□□□□□ -0.68
THRA-202ENST00000394121 LCE2CQ5TA81 110 aa10.72□□□□□ -0.69
THRA-202ENST00000394121 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
THRA-202ENST00000394121 MT1HP80294 61 aa10.49□□□□□ -0.73
THRA-202ENST00000394121 CAMK2N1Q7Z7J9 78 aa10.41□□□□□ -0.74
THRA-202ENST00000394121 M0R2T5 61 aa10.38□□□□□ -0.75
THRA-202ENST00000394121 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
THRA-202ENST00000394121 LUZP6Q538Z0 58 aa10.35□□□□□ -0.75
THRA-202ENST00000394121 PP632Q6XCG6 107 aa10.35□□□□□ -0.75
THRA-202ENST00000394121 LCE2AQ5TA79 106 aaPredicted RBP10.13□□□□□ -0.79
THRA-202ENST00000394121 KRTAP9-8Q9BYQ0 159 aa10.09□□□□□ -0.79
THRA-202ENST00000394121 TNP1P09430 55 aa10.06□□□□□ -0.8
THRA-202ENST00000394121 MT2AP02795 61 aa10.05□□□□□ -0.8
THRA-202ENST00000394121 MT1FP04733 61 aa10.03□□□□□ -0.8
THRA-202ENST00000394121 KRTAP23-1A1A580 65 aa10.01□□□□□ -0.81
THRA-202ENST00000394121 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
THRA-202ENST00000394121 SPRR2GQ9BYE4 73 aa9.89□□□□□ -0.83
THRA-202ENST00000394121 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
THRA-202ENST00000394121 KRTAP9-3Q9BYQ3 159 aa9.71□□□□□ -0.85
THRA-202ENST00000394121 SPRR5A0A1B0GTR4 108 aa9.67□□□□□ -0.86
THRA-202ENST00000394121 LCE2BO14633 110 aa9.53□□□□□ -0.88
THRA-202ENST00000394121 USH2AO75445 5202 aa9.51□□□□□ -0.89
THRA-202ENST00000394121 LCE3AQ5TA76 89 aa9.49□□□□□ -0.89
THRA-202ENST00000394121 KRTAP19-8Q3LI54 63 aa9.45□□□□□ -0.9
THRA-202ENST00000394121 MT1BP07438 61 aa9.44□□□□□ -0.9
THRA-202ENST00000394121 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
THRA-202ENST00000394121 KRTAP8-1Q8IUC2 63 aa9.29□□□□□ -0.92
THRA-202ENST00000394121 KRTAP10-5P60370 271 aa9.27□□□□□ -0.93
THRA-202ENST00000394121 MT1XP80297 61 aa9.25□□□□□ -0.93
THRA-202ENST00000394121 SSPOA2VEC9 5147 aa9.15□□□□□ -0.94
THRA-202ENST00000394121 PRO2289Q9P1D8 64 aa9.15□□□□□ -0.95
THRA-202ENST00000394121 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
THRA-202ENST00000394121 KRTAP10-12P60413 245 aa9.1□□□□□ -0.95
THRA-202ENST00000394121 KRTAP12-3P60328 96 aa9.05□□□□□ -0.96
THRA-202ENST00000394121 KRTAP10-7P60409 375 aaPredicted RBP8.98□□□□□ -0.97
THRA-202ENST00000394121 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
THRA-202ENST00000394121 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
THRA-202ENST00000394121 INE1O15225 51 aa8.83□□□□□ -1
THRA-202ENST00000394121 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
THRA-202ENST00000394121 KMT2DO14686 5537 aa8.74□□□□□ -1.01
THRA-202ENST00000394121 KRTAP19-5Q3LI72 72 aa8.63□□□□□ -1.03
THRA-202ENST00000394121 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
THRA-202ENST00000394121 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
THRA-202ENST00000394121 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
THRA-202ENST00000394121 LCE3CQ5T5A8 94 aa8.54□□□□□ -1.04
THRA-202ENST00000394121 MACF1Q9UPN3 7388 aaKnown RBP8.41□□□□□ -1.06
THRA-202ENST00000394121 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
THRA-202ENST00000394121 SYNE2Q8WXH0 6885 aaKnown RBP8.26□□□□□ -1.09
THRA-202ENST00000394121 KRTAP19-7Q3SYF9 63 aa8.24□□□□□ -1.09
THRA-202ENST00000394121 KRTAP9-6A8MVA2 160 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms