RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 C5orf47Q569G3 176 aa8.32□□□□□ -1.08
PDLIM7-205ENST00000393551 MT1BP07438 61 aa8.27□□□□□ -1.09
PDLIM7-205ENST00000393551 COX7CP15954 63 aa8.27□□□□□ -1.09
PDLIM7-205ENST00000393551 H3BPC8 53 aa8.26□□□□□ -1.09
PDLIM7-205ENST00000393551 S4R3F8 94 aa8.24□□□□□ -1.09
PDLIM7-205ENST00000393551 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
PDLIM7-205ENST00000393551 MP68P56378 58 aa8.23□□□□□ -1.09
PDLIM7-205ENST00000393551 LCA10Q71F78 164 aa8.23□□□□□ -1.09
PDLIM7-205ENST00000393551 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
PDLIM7-205ENST00000393551 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
PDLIM7-205ENST00000393551 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
PDLIM7-205ENST00000393551 PCP4P48539 62 aa8.19□□□□□ -1.1
PDLIM7-205ENST00000393551 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
PDLIM7-205ENST00000393551 H0Y9P7 68 aa8.18□□□□□ -1.1
PDLIM7-205ENST00000393551 A6NN06 94 aa8.16□□□□□ -1.1
PDLIM7-205ENST00000393551 NEBP20929 6669 aa8.16□□□□□ -1.1
PDLIM7-205ENST00000393551 Q5VV11 94 aa8.15□□□□□ -1.1
PDLIM7-205ENST00000393551 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
PDLIM7-205ENST00000393551 LOC101927531A0A1B0GV80 90 aa8.14□□□□□ -1.11
PDLIM7-205ENST00000393551 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
PDLIM7-205ENST00000393551 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
PDLIM7-205ENST00000393551 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
PDLIM7-205ENST00000393551 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
PDLIM7-205ENST00000393551 NDUFC1O43677 76 aa8.1□□□□□ -1.11
PDLIM7-205ENST00000393551 CCDC179H3BU77 68 aa8.08□□□□□ -1.12
PDLIM7-205ENST00000393551 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
PDLIM7-205ENST00000393551 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
PDLIM7-205ENST00000393551 SNURFQ9Y675 71 aa8.03□□□□□ -1.12
PDLIM7-205ENST00000393551 H7BZZ5 65 aa7.96□□□□□ -1.14
PDLIM7-205ENST00000393551 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
PDLIM7-205ENST00000393551 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
PDLIM7-205ENST00000393551 TMEM258P61165 79 aa7.92□□□□□ -1.14
PDLIM7-205ENST00000393551 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
PDLIM7-205ENST00000393551 KMT2DO14686 5537 aa7.91□□□□□ -1.14
PDLIM7-205ENST00000393551 CYSTM1Q9H1C7 97 aa7.91□□□□□ -1.14
PDLIM7-205ENST00000393551 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
PDLIM7-205ENST00000393551 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
PDLIM7-205ENST00000393551 H0YAA0 97 aa7.83□□□□□ -1.16
PDLIM7-205ENST00000393551 A8MUN3 132 aa7.82□□□□□ -1.16
PDLIM7-205ENST00000393551 KRTAP20-1Q3LI63 56 aa7.79□□□□□ -1.16
PDLIM7-205ENST00000393551 DMAC1Q96GE9 116 aa7.78□□□□□ -1.16
PDLIM7-205ENST00000393551 ACYP2P14621 99 aa7.76□□□□□ -1.17
PDLIM7-205ENST00000393551 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
PDLIM7-205ENST00000393551 MT1XP80297 61 aa7.7□□□□□ -1.18
PDLIM7-205ENST00000393551 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
PDLIM7-205ENST00000393551 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
PDLIM7-205ENST00000393551 COA5Q86WW8 74 aa7.61□□□□□ -1.19
PDLIM7-205ENST00000393551 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
PDLIM7-205ENST00000393551 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
PDLIM7-205ENST00000393551 P0C880 135 aa7.59□□□□□ -1.19
PDLIM7-205ENST00000393551 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
PDLIM7-205ENST00000393551 SPTSSBQ8NFR3 76 aa7.57□□□□□ -1.2
PDLIM7-205ENST00000393551 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
PDLIM7-205ENST00000393551 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
PDLIM7-205ENST00000393551 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
PDLIM7-205ENST00000393551 SPRR2EP22531 72 aa7.53□□□□□ -1.2
PDLIM7-205ENST00000393551 SPRR2BP35325 72 aa7.53□□□□□ -1.2
PDLIM7-205ENST00000393551 SPRR2AP35326 72 aa7.53□□□□□ -1.2
PDLIM7-205ENST00000393551 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
PDLIM7-205ENST00000393551 R4GN34 69 aa7.52□□□□□ -1.21
PDLIM7-205ENST00000393551 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
PDLIM7-205ENST00000393551 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
PDLIM7-205ENST00000393551 M0QZ58 72 aa7.47□□□□□ -1.21
PDLIM7-205ENST00000393551 SMIM26A0A096LP01 95 aa7.46□□□□□ -1.22
PDLIM7-205ENST00000393551 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
PDLIM7-205ENST00000393551 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
PDLIM7-205ENST00000393551 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
PDLIM7-205ENST00000393551 V9GYY9 64 aa7.41□□□□□ -1.22
PDLIM7-205ENST00000393551 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
PDLIM7-205ENST00000393551 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
PDLIM7-205ENST00000393551 Q1T7F1 81 aa7.34□□□□□ -1.23
PDLIM7-205ENST00000393551 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
PDLIM7-205ENST00000393551 SEC61GP60059 68 aa7.3□□□□□ -1.24
PDLIM7-205ENST00000393551 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
PDLIM7-205ENST00000393551 KRTAP2-2Q9BYT5 123 aa7.3□□□□□ -1.24
PDLIM7-205ENST00000393551 KRTAP2-1Q9BYU5 128 aa7.3□□□□□ -1.24
PDLIM7-205ENST00000393551 SPRR2DP22532 72 aa7.28□□□□□ -1.24
PDLIM7-205ENST00000393551 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
PDLIM7-205ENST00000393551 A0A1B0GU69 56 aa7.23□□□□□ -1.25
PDLIM7-205ENST00000393551 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
PDLIM7-205ENST00000393551 PSPHP1O15172 72 aa7.1□□□□□ -1.27
PDLIM7-205ENST00000393551 A0A1B0GU33 70 aa7.06□□□□□ -1.28
PDLIM7-205ENST00000393551 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
PDLIM7-205ENST00000393551 UQCR11O14957 56 aa7.03□□□□□ -1.28
PDLIM7-205ENST00000393551 A6NED7 52 aa6.95□□□□□ -1.3
PDLIM7-205ENST00000393551 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
PDLIM7-205ENST00000393551 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
PDLIM7-205ENST00000393551 KRTAP19-7Q3SYF9 63 aa6.89□□□□□ -1.31
PDLIM7-205ENST00000393551 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
PDLIM7-205ENST00000393551 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
PDLIM7-205ENST00000393551 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
PDLIM7-205ENST00000393551 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
PDLIM7-205ENST00000393551 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
PDLIM7-205ENST00000393551 MT1EP04732 61 aa6.82□□□□□ -1.32
PDLIM7-205ENST00000393551 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
PDLIM7-205ENST00000393551 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
PDLIM7-205ENST00000393551 A0A0D9SG42 100 aa6.72□□□□□ -1.33
PDLIM7-205ENST00000393551 K7ERS5 55 aa6.71□□□□□ -1.34
PDLIM7-205ENST00000393551 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
PDLIM7-205ENST00000393551 A8MU10 97 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms