RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
PDLIM7-204ENST00000393546 A8MUN3 132 aa8.88□□□□□ -0.99
PDLIM7-204ENST00000393546 USH2AO75445 5202 aa8.87□□□□□ -0.99
PDLIM7-204ENST00000393546 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
PDLIM7-204ENST00000393546 LCE2BO14633 110 aa8.85□□□□□ -0.99
PDLIM7-204ENST00000393546 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
PDLIM7-204ENST00000393546 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
PDLIM7-204ENST00000393546 NDUFC1O43677 76 aa8.79□□□□□ -1
PDLIM7-204ENST00000393546 SSPOA2VEC9 5147 aa8.71□□□□□ -1.02
PDLIM7-204ENST00000393546 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
PDLIM7-204ENST00000393546 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
PDLIM7-204ENST00000393546 H0YAA0 97 aa8.62□□□□□ -1.03
PDLIM7-204ENST00000393546 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
PDLIM7-204ENST00000393546 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
PDLIM7-204ENST00000393546 ACYP2P14621 99 aa8.59□□□□□ -1.03
PDLIM7-204ENST00000393546 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
PDLIM7-204ENST00000393546 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
PDLIM7-204ENST00000393546 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
PDLIM7-204ENST00000393546 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
PDLIM7-204ENST00000393546 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
PDLIM7-204ENST00000393546 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
PDLIM7-204ENST00000393546 SPANXA2-OT1Q8N9U9 137 aa8.49□□□□□ -1.05
PDLIM7-204ENST00000393546 Q5VV11 94 aa8.47□□□□□ -1.05
PDLIM7-204ENST00000393546 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
PDLIM7-204ENST00000393546 COX7CP15954 63 aa8.45□□□□□ -1.06
PDLIM7-204ENST00000393546 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
PDLIM7-204ENST00000393546 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
PDLIM7-204ENST00000393546 MT1BP07438 61 aa8.41□□□□□ -1.06
PDLIM7-204ENST00000393546 P0C880 135 aa8.36□□□□□ -1.07
PDLIM7-204ENST00000393546 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
PDLIM7-204ENST00000393546 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-204ENST00000393546 R4GN34 69 aa8.31□□□□□ -1.08
PDLIM7-204ENST00000393546 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-204ENST00000393546 ANAPC13Q9BS18 74 aa8.3□□□□□ -1.08
PDLIM7-204ENST00000393546 A6NN06 94 aa8.25□□□□□ -1.09
PDLIM7-204ENST00000393546 M0QZ58 72 aa8.25□□□□□ -1.09
PDLIM7-204ENST00000393546 H7BZZ5 65 aa8.24□□□□□ -1.09
PDLIM7-204ENST00000393546 COA5Q86WW8 74 aa8.22□□□□□ -1.09
PDLIM7-204ENST00000393546 CYSTM1Q9H1C7 97 aa8.22□□□□□ -1.09
PDLIM7-204ENST00000393546 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
PDLIM7-204ENST00000393546 PLAC4Q8WY50 150 aa8.16□□□□□ -1.1
PDLIM7-204ENST00000393546 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
PDLIM7-204ENST00000393546 CCDC179H3BU77 68 aa8.11□□□□□ -1.11
PDLIM7-204ENST00000393546 KRTAP6-3Q3LI67 103 aa8.05□□□□□ -1.12
PDLIM7-204ENST00000393546 SEC61GP60059 68 aa8.03□□□□□ -1.12
PDLIM7-204ENST00000393546 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
PDLIM7-204ENST00000393546 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
PDLIM7-204ENST00000393546 ATP5EP56381 51 aaPredicted RBP7.95□□□□□ -1.14
PDLIM7-204ENST00000393546 MT1XP80297 61 aa7.95□□□□□ -1.14
PDLIM7-204ENST00000393546 PCP4P48539 62 aa7.92□□□□□ -1.14
PDLIM7-204ENST00000393546 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
PDLIM7-204ENST00000393546 A0A1B0GU33 70 aa7.84□□□□□ -1.15
PDLIM7-204ENST00000393546 TMEM258P61165 79 aa7.83□□□□□ -1.16
PDLIM7-204ENST00000393546 NEBP20929 6669 aa7.83□□□□□ -1.16
PDLIM7-204ENST00000393546 A0A1B0GU69 56 aa7.82□□□□□ -1.16
PDLIM7-204ENST00000393546 KRTAP20-1Q3LI63 56 aa7.77□□□□□ -1.17
PDLIM7-204ENST00000393546 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
PDLIM7-204ENST00000393546 A0A0D9SG42 100 aa7.74□□□□□ -1.17
PDLIM7-204ENST00000393546 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
PDLIM7-204ENST00000393546 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
PDLIM7-204ENST00000393546 PRR15LQ9BU68 103 aa7.69□□□□□ -1.18
PDLIM7-204ENST00000393546 KMT2DO14686 5537 aa7.66□□□□□ -1.18
PDLIM7-204ENST00000393546 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
PDLIM7-204ENST00000393546 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
PDLIM7-204ENST00000393546 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PDLIM7-204ENST00000393546 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
PDLIM7-204ENST00000393546 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
PDLIM7-204ENST00000393546 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
PDLIM7-204ENST00000393546 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
PDLIM7-204ENST00000393546 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
PDLIM7-204ENST00000393546 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
PDLIM7-204ENST00000393546 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
PDLIM7-204ENST00000393546 A8MU10 97 aa7.52□□□□□ -1.21
PDLIM7-204ENST00000393546 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
PDLIM7-204ENST00000393546 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PDLIM7-204ENST00000393546 MDN1Q9NU22 5596 aa7.46□□□□□ -1.22
PDLIM7-204ENST00000393546 UQCR11O14957 56 aa7.43□□□□□ -1.22
PDLIM7-204ENST00000393546 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
PDLIM7-204ENST00000393546 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
PDLIM7-204ENST00000393546 V9GYY9 64 aa7.39□□□□□ -1.23
PDLIM7-204ENST00000393546 SPRR2EP22531 72 aa7.33□□□□□ -1.24
PDLIM7-204ENST00000393546 SPRR2BP35325 72 aa7.33□□□□□ -1.24
PDLIM7-204ENST00000393546 SPRR2AP35326 72 aa7.33□□□□□ -1.24
PDLIM7-204ENST00000393546 Q1T7F1 81 aa7.33□□□□□ -1.24
PDLIM7-204ENST00000393546 PSPHP1O15172 72 aa7.28□□□□□ -1.24
PDLIM7-204ENST00000393546 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
PDLIM7-204ENST00000393546 LCE1AQ5T7P2 110 aa7.26□□□□□ -1.25
PDLIM7-204ENST00000393546 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.26
PDLIM7-204ENST00000393546 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
PDLIM7-204ENST00000393546 TNP1P09430 55 aa7.17□□□□□ -1.26
PDLIM7-204ENST00000393546 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
PDLIM7-204ENST00000393546 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
PDLIM7-204ENST00000393546 K7ERS5 55 aa7.12□□□□□ -1.27
PDLIM7-204ENST00000393546 KRTAP19-7Q3SYF9 63 aa7.1□□□□□ -1.27
PDLIM7-204ENST00000393546 SPRR2DP22532 72 aa7.08□□□□□ -1.28
PDLIM7-204ENST00000393546 A6NED7 52 aa7.07□□□□□ -1.28
PDLIM7-204ENST00000393546 MT1EP04732 61 aa7.04□□□□□ -1.28
PDLIM7-204ENST00000393546 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
PDLIM7-204ENST00000393546 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
PDLIM7-204ENST00000393546 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms