RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 LPAP08519 4548 aa9.32□□□□□ -0.92
RUFY1-203ENST00000393448 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
RUFY1-203ENST00000393448 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
RUFY1-203ENST00000393448 LRP2P98164 4655 aa9.27□□□□□ -0.93
RUFY1-203ENST00000393448 ACYP2P14621 99 aa9.27□□□□□ -0.93
RUFY1-203ENST00000393448 J3QL48 77 aa9.22□□□□□ -0.93
RUFY1-203ENST00000393448 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
RUFY1-203ENST00000393448 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
RUFY1-203ENST00000393448 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.95
RUFY1-203ENST00000393448 H3BS24 57 aa9.14□□□□□ -0.95
RUFY1-203ENST00000393448 ADM2Q7Z4H4 148 aa9.14□□□□□ -0.95
RUFY1-203ENST00000393448 A0A1B0GU69 56 aa9.1□□□□□ -0.95
RUFY1-203ENST00000393448 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
RUFY1-203ENST00000393448 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
RUFY1-203ENST00000393448 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
RUFY1-203ENST00000393448 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.97
RUFY1-203ENST00000393448 UQCR11O14957 56 aa9□□□□□ -0.97
RUFY1-203ENST00000393448 HERC1Q15751 4861 aa8.99□□□□□ -0.97
RUFY1-203ENST00000393448 MUC17Q685J3 4493 aa8.87□□□□□ -0.99
RUFY1-203ENST00000393448 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
RUFY1-203ENST00000393448 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
RUFY1-203ENST00000393448 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
RUFY1-203ENST00000393448 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
RUFY1-203ENST00000393448 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
RUFY1-203ENST00000393448 MUC2Q02817 5179 aa8.77□□□□□ -1.01
RUFY1-203ENST00000393448 S4R3F8 94 aa8.76□□□□□ -1.01
RUFY1-203ENST00000393448 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
RUFY1-203ENST00000393448 H0YAA0 97 aa8.63□□□□□ -1.03
RUFY1-203ENST00000393448 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
RUFY1-203ENST00000393448 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
RUFY1-203ENST00000393448 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
RUFY1-203ENST00000393448 A0A1B0GU33 70 aa8.53□□□□□ -1.04
RUFY1-203ENST00000393448 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
RUFY1-203ENST00000393448 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
RUFY1-203ENST00000393448 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
RUFY1-203ENST00000393448 ROMO1P60602 79 aa8.48□□□□□ -1.05
RUFY1-203ENST00000393448 P0C880 135 aa8.47□□□□□ -1.05
RUFY1-203ENST00000393448 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
RUFY1-203ENST00000393448 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.07
RUFY1-203ENST00000393448 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
RUFY1-203ENST00000393448 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
RUFY1-203ENST00000393448 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
RUFY1-203ENST00000393448 K7ERS5 55 aa8.32□□□□□ -1.08
RUFY1-203ENST00000393448 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
RUFY1-203ENST00000393448 A0A0D9SG42 100 aa8.26□□□□□ -1.09
RUFY1-203ENST00000393448 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
RUFY1-203ENST00000393448 M0QZ58 72 aa8.12□□□□□ -1.11
RUFY1-203ENST00000393448 R4GN34 69 aa8.1□□□□□ -1.11
RUFY1-203ENST00000393448 MT1HP80294 61 aa8.09□□□□□ -1.11
RUFY1-203ENST00000393448 M0R2T5 61 aa8.05□□□□□ -1.12
RUFY1-203ENST00000393448 KRTAP12-2P59991 146 aa8.04□□□□□ -1.12
RUFY1-203ENST00000393448 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
RUFY1-203ENST00000393448 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
RUFY1-203ENST00000393448 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
RUFY1-203ENST00000393448 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
RUFY1-203ENST00000393448 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
RUFY1-203ENST00000393448 MT2AP02795 61 aa7.82□□□□□ -1.16
RUFY1-203ENST00000393448 KRTAP9-8Q9BYQ0 159 aa7.82□□□□□ -1.16
RUFY1-203ENST00000393448 MT1FP04733 61 aa7.8□□□□□ -1.16
RUFY1-203ENST00000393448 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
RUFY1-203ENST00000393448 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
RUFY1-203ENST00000393448 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
RUFY1-203ENST00000393448 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
RUFY1-203ENST00000393448 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
RUFY1-203ENST00000393448 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
RUFY1-203ENST00000393448 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
RUFY1-203ENST00000393448 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
RUFY1-203ENST00000393448 KRTAP9-2Q9BYQ4 174 aa7.44□□□□□ -1.22
RUFY1-203ENST00000393448 MT1BP07438 61 aa7.41□□□□□ -1.22
RUFY1-203ENST00000393448 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
RUFY1-203ENST00000393448 LCE2BO14633 110 aa7.32□□□□□ -1.24
RUFY1-203ENST00000393448 USH2AO75445 5202 aa7.3□□□□□ -1.24
RUFY1-203ENST00000393448 TNP1P09430 55 aa7.24□□□□□ -1.25
RUFY1-203ENST00000393448 MT1XP80297 61 aa7.22□□□□□ -1.25
RUFY1-203ENST00000393448 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
RUFY1-203ENST00000393448 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
RUFY1-203ENST00000393448 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
RUFY1-203ENST00000393448 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
RUFY1-203ENST00000393448 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
RUFY1-203ENST00000393448 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
RUFY1-203ENST00000393448 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
RUFY1-203ENST00000393448 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
RUFY1-203ENST00000393448 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
RUFY1-203ENST00000393448 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
RUFY1-203ENST00000393448 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
RUFY1-203ENST00000393448 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
RUFY1-203ENST00000393448 KMT2DO14686 5537 aa6.86□□□□□ -1.31
RUFY1-203ENST00000393448 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
RUFY1-203ENST00000393448 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
RUFY1-203ENST00000393448 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
RUFY1-203ENST00000393448 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
RUFY1-203ENST00000393448 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
RUFY1-203ENST00000393448 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
RUFY1-203ENST00000393448 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
RUFY1-203ENST00000393448 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
RUFY1-203ENST00000393448 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
RUFY1-203ENST00000393448 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
RUFY1-203ENST00000393448 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
RUFY1-203ENST00000393448 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
RUFY1-203ENST00000393448 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms