RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
MBD4-202ENST00000393278 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
MBD4-202ENST00000393278 S4R3F8 94 aa8.72□□□□□ -1.01
MBD4-202ENST00000393278 LCA10Q71F78 164 aa8.71□□□□□ -1.02
MBD4-202ENST00000393278 PSPHP1O15172 72 aa8.69□□□□□ -1.02
MBD4-202ENST00000393278 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
MBD4-202ENST00000393278 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
MBD4-202ENST00000393278 RNF213Q63HN8 5207 aa8.65□□□□□ -1.02
MBD4-202ENST00000393278 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.03
MBD4-202ENST00000393278 Q5VV11 94 aa8.62□□□□□ -1.03
MBD4-202ENST00000393278 MUC2Q02817 5179 aa8.6□□□□□ -1.03
MBD4-202ENST00000393278 A0A1B0GU69 56 aa8.6□□□□□ -1.03
MBD4-202ENST00000393278 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
MBD4-202ENST00000393278 SEC61GP60059 68 aa8.53□□□□□ -1.04
MBD4-202ENST00000393278 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
MBD4-202ENST00000393278 FLGP20930 4061 aaPredicted RBP8.43□□□□□ -1.06
MBD4-202ENST00000393278 A6NED7 52 aa8.42□□□□□ -1.06
MBD4-202ENST00000393278 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
MBD4-202ENST00000393278 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
MBD4-202ENST00000393278 BRK1Q8WUW1 75 aa8.36□□□□□ -1.07
MBD4-202ENST00000393278 H0YAA0 97 aa8.35□□□□□ -1.07
MBD4-202ENST00000393278 UQCR11O14957 56 aa8.35□□□□□ -1.07
MBD4-202ENST00000393278 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.08
MBD4-202ENST00000393278 A0A1B0GU33 70 aa8.33□□□□□ -1.08
MBD4-202ENST00000393278 P0C880 135 aa8.3□□□□□ -1.08
MBD4-202ENST00000393278 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
MBD4-202ENST00000393278 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
MBD4-202ENST00000393278 A8MU10 97 aa8.26□□□□□ -1.09
MBD4-202ENST00000393278 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
MBD4-202ENST00000393278 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
MBD4-202ENST00000393278 MT1HP80294 61 aa8.24□□□□□ -1.09
MBD4-202ENST00000393278 PRO0628Q9UI54 55 aa8.2□□□□□ -1.1
MBD4-202ENST00000393278 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
MBD4-202ENST00000393278 M0R2T5 61 aa8.14□□□□□ -1.11
MBD4-202ENST00000393278 M0QZ58 72 aa8.09□□□□□ -1.11
MBD4-202ENST00000393278 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
MBD4-202ENST00000393278 R4GN34 69 aa8.03□□□□□ -1.12
MBD4-202ENST00000393278 A0A0D9SG42 100 aa7.99□□□□□ -1.13
MBD4-202ENST00000393278 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
MBD4-202ENST00000393278 KRTAP9-8Q9BYQ0 159 aa7.95□□□□□ -1.14
MBD4-202ENST00000393278 MT2AP02795 61 aa7.93□□□□□ -1.14
MBD4-202ENST00000393278 PMAIP1Q13794 54 aa7.9□□□□□ -1.14
MBD4-202ENST00000393278 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
MBD4-202ENST00000393278 MT1FP04733 61 aa7.89□□□□□ -1.15
MBD4-202ENST00000393278 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
MBD4-202ENST00000393278 A6NN06 94 aa7.86□□□□□ -1.15
MBD4-202ENST00000393278 K7ERS5 55 aa7.86□□□□□ -1.15
MBD4-202ENST00000393278 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
MBD4-202ENST00000393278 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
MBD4-202ENST00000393278 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
MBD4-202ENST00000393278 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
MBD4-202ENST00000393278 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
MBD4-202ENST00000393278 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
MBD4-202ENST00000393278 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
MBD4-202ENST00000393278 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
MBD4-202ENST00000393278 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
MBD4-202ENST00000393278 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
MBD4-202ENST00000393278 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
MBD4-202ENST00000393278 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.19
MBD4-202ENST00000393278 KTN1-AS1Q86SY8 53 aa7.59□□□□□ -1.19
MBD4-202ENST00000393278 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.19
MBD4-202ENST00000393278 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
MBD4-202ENST00000393278 ROMO1P60602 79 aa7.56□□□□□ -1.2
MBD4-202ENST00000393278 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
MBD4-202ENST00000393278 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
MBD4-202ENST00000393278 MT1BP07438 61 aa7.48□□□□□ -1.21
MBD4-202ENST00000393278 LCE2BO14633 110 aa7.44□□□□□ -1.22
MBD4-202ENST00000393278 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
MBD4-202ENST00000393278 PRAC1Q96KF2 57 aa7.41□□□□□ -1.22
MBD4-202ENST00000393278 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
MBD4-202ENST00000393278 MT1XP80297 61 aa7.25□□□□□ -1.25
MBD4-202ENST00000393278 USH2AO75445 5202 aa7.23□□□□□ -1.25
MBD4-202ENST00000393278 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
MBD4-202ENST00000393278 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
MBD4-202ENST00000393278 TNP1P09430 55 aa7.17□□□□□ -1.26
MBD4-202ENST00000393278 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
MBD4-202ENST00000393278 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
MBD4-202ENST00000393278 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
MBD4-202ENST00000393278 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
MBD4-202ENST00000393278 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
MBD4-202ENST00000393278 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
MBD4-202ENST00000393278 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
MBD4-202ENST00000393278 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
MBD4-202ENST00000393278 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
MBD4-202ENST00000393278 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
MBD4-202ENST00000393278 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
MBD4-202ENST00000393278 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
MBD4-202ENST00000393278 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
MBD4-202ENST00000393278 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
MBD4-202ENST00000393278 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
MBD4-202ENST00000393278 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
MBD4-202ENST00000393278 KMT2DO14686 5537 aa6.64□□□□□ -1.35
MBD4-202ENST00000393278 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
MBD4-202ENST00000393278 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
MBD4-202ENST00000393278 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
MBD4-202ENST00000393278 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
MBD4-202ENST00000393278 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
MBD4-202ENST00000393278 MT1EP04732 61 aa6.35□□□□□ -1.39
MBD4-202ENST00000393278 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
MBD4-202ENST00000393278 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms