RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 M0R2T5 61 aa6.31□□□□□ -1.4
USP44-202ENST00000393091 H0YAA0 97 aa6.3□□□□□ -1.4
USP44-202ENST00000393091 H7BZZ5 65 aa6.3□□□□□ -1.4
USP44-202ENST00000393091 MT2AP02795 61 aa6.29□□□□□ -1.4
USP44-202ENST00000393091 ACYP2P14621 99 aa6.28□□□□□ -1.4
USP44-202ENST00000393091 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
USP44-202ENST00000393091 CYSTM1Q9H1C7 97 aa6.24□□□□□ -1.41
USP44-202ENST00000393091 MT1FP04733 61 aa6.22□□□□□ -1.41
USP44-202ENST00000393091 CCDC179H3BU77 68 aa6.22□□□□□ -1.41
USP44-202ENST00000393091 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
USP44-202ENST00000393091 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
USP44-202ENST00000393091 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
USP44-202ENST00000393091 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
USP44-202ENST00000393091 TMEM258P61165 79 aa6.12□□□□□ -1.43
USP44-202ENST00000393091 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
USP44-202ENST00000393091 COA5Q86WW8 74 aa6.09□□□□□ -1.43
USP44-202ENST00000393091 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
USP44-202ENST00000393091 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
USP44-202ENST00000393091 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
USP44-202ENST00000393091 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
USP44-202ENST00000393091 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
USP44-202ENST00000393091 LCE2BO14633 110 aa6.01□□□□□ -1.45
USP44-202ENST00000393091 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
USP44-202ENST00000393091 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
USP44-202ENST00000393091 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
USP44-202ENST00000393091 P0C880 135 aa5.92□□□□□ -1.46
USP44-202ENST00000393091 PCP4P48539 62 aa5.92□□□□□ -1.46
USP44-202ENST00000393091 M0QZ58 72 aa5.87□□□□□ -1.47
USP44-202ENST00000393091 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
USP44-202ENST00000393091 MT1BP07438 61 aa5.86□□□□□ -1.47
USP44-202ENST00000393091 USH2AO75445 5202 aa5.86□□□□□ -1.47
USP44-202ENST00000393091 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
USP44-202ENST00000393091 Q5VV11 94 aa5.84□□□□□ -1.47
USP44-202ENST00000393091 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
USP44-202ENST00000393091 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
USP44-202ENST00000393091 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
USP44-202ENST00000393091 A6NN06 94 aa5.81□□□□□ -1.48
USP44-202ENST00000393091 SEC61GP60059 68 aa5.79□□□□□ -1.48
USP44-202ENST00000393091 R4GN34 69 aa5.79□□□□□ -1.48
USP44-202ENST00000393091 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
USP44-202ENST00000393091 Q1T7F1 81 aa5.75□□□□□ -1.49
USP44-202ENST00000393091 A0A1B0GU69 56 aa5.73□□□□□ -1.49
USP44-202ENST00000393091 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
USP44-202ENST00000393091 V9GYY9 64 aa5.73□□□□□ -1.49
USP44-202ENST00000393091 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
USP44-202ENST00000393091 A0A1B0GU33 70 aa5.7□□□□□ -1.5
USP44-202ENST00000393091 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
USP44-202ENST00000393091 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
USP44-202ENST00000393091 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
USP44-202ENST00000393091 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
USP44-202ENST00000393091 MT1XP80297 61 aa5.58□□□□□ -1.52
USP44-202ENST00000393091 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
USP44-202ENST00000393091 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
USP44-202ENST00000393091 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
USP44-202ENST00000393091 UQCR11O14957 56 aa5.53□□□□□ -1.52
USP44-202ENST00000393091 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
USP44-202ENST00000393091 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
USP44-202ENST00000393091 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
USP44-202ENST00000393091 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
USP44-202ENST00000393091 PSPHP1O15172 72 aa5.41□□□□□ -1.54
USP44-202ENST00000393091 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
USP44-202ENST00000393091 A8MU10 97 aa5.41□□□□□ -1.54
USP44-202ENST00000393091 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
USP44-202ENST00000393091 A0A0D9SG42 100 aa5.39□□□□□ -1.55
USP44-202ENST00000393091 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
USP44-202ENST00000393091 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
USP44-202ENST00000393091 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
USP44-202ENST00000393091 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
USP44-202ENST00000393091 A6NED7 52 aa5.28□□□□□ -1.56
USP44-202ENST00000393091 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
USP44-202ENST00000393091 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
USP44-202ENST00000393091 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
USP44-202ENST00000393091 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
USP44-202ENST00000393091 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
USP44-202ENST00000393091 K7ERS5 55 aa5.21□□□□□ -1.58
USP44-202ENST00000393091 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
USP44-202ENST00000393091 TNP1P09430 55 aa5.1□□□□□ -1.59
USP44-202ENST00000393091 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
USP44-202ENST00000393091 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
USP44-202ENST00000393091 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
USP44-202ENST00000393091 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
USP44-202ENST00000393091 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
USP44-202ENST00000393091 ROMO1P60602 79 aa5□□□□□ -1.61
USP44-202ENST00000393091 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
USP44-202ENST00000393091 KMT2DO14686 5537 aa4.96□□□□□ -1.62
USP44-202ENST00000393091 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
USP44-202ENST00000393091 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
USP44-202ENST00000393091 MT1EP04732 61 aa4.93□□□□□ -1.62
USP44-202ENST00000393091 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
USP44-202ENST00000393091 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
USP44-202ENST00000393091 NEBP20929 6669 aa4.89□□□□□ -1.63
USP44-202ENST00000393091 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
USP44-202ENST00000393091 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
USP44-202ENST00000393091 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
USP44-202ENST00000393091 SPRR2EP22531 72 aa4.81□□□□□ -1.64
USP44-202ENST00000393091 SPRR2BP35325 72 aa4.81□□□□□ -1.64
USP44-202ENST00000393091 SPRR2AP35326 72 aa4.81□□□□□ -1.64
USP44-202ENST00000393091 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
USP44-202ENST00000393091 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
USP44-202ENST00000393091 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms