RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
RFC4-202ENST00000392481 FAM236AA0A1B0GUQ0 79 aa5.43□□□□□ -1.54
RFC4-202ENST00000392481 FAM236BA0A1B0GV22 79 aa5.43□□□□□ -1.54
RFC4-202ENST00000392481 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
RFC4-202ENST00000392481 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
RFC4-202ENST00000392481 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
RFC4-202ENST00000392481 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
RFC4-202ENST00000392481 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
RFC4-202ENST00000392481 MP68P56378 58 aa5.4□□□□□ -1.55
RFC4-202ENST00000392481 PCP4P48539 62 aa5.39□□□□□ -1.55
RFC4-202ENST00000392481 A8MUN3 132 aa5.37□□□□□ -1.55
RFC4-202ENST00000392481 KLKP1Q107X0 134 aa5.36□□□□□ -1.55
RFC4-202ENST00000392481 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
RFC4-202ENST00000392481 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
RFC4-202ENST00000392481 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
RFC4-202ENST00000392481 NDUFC1O43677 76 aa5.34□□□□□ -1.55
RFC4-202ENST00000392481 H3BPC8 53 aa5.33□□□□□ -1.56
RFC4-202ENST00000392481 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
RFC4-202ENST00000392481 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
RFC4-202ENST00000392481 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
RFC4-202ENST00000392481 H0YAA0 97 aa5.29□□□□□ -1.56
RFC4-202ENST00000392481 Q5VV11 94 aa5.29□□□□□ -1.56
RFC4-202ENST00000392481 MT1BP07438 61 aa5.28□□□□□ -1.56
RFC4-202ENST00000392481 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
RFC4-202ENST00000392481 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
RFC4-202ENST00000392481 TRAV7A0A075B6U4 112 aa5.26□□□□□ -1.57
RFC4-202ENST00000392481 COX7CP15954 63 aa5.25□□□□□ -1.57
RFC4-202ENST00000392481 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
RFC4-202ENST00000392481 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
RFC4-202ENST00000392481 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
RFC4-202ENST00000392481 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
RFC4-202ENST00000392481 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
RFC4-202ENST00000392481 A6NN06 94 aa5.2□□□□□ -1.58
RFC4-202ENST00000392481 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
RFC4-202ENST00000392481 C20orf197Q8N268 126 aa5.17□□□□□ -1.58
RFC4-202ENST00000392481 KRTAP10-5P60370 271 aa5.15□□□□□ -1.58
RFC4-202ENST00000392481 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
RFC4-202ENST00000392481 CYSTM1Q9H1C7 97 aa5.13□□□□□ -1.59
RFC4-202ENST00000392481 SNURFQ9Y675 71 aa5.13□□□□□ -1.59
RFC4-202ENST00000392481 ACYP2P14621 99 aa5.12□□□□□ -1.59
RFC4-202ENST00000392481 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
RFC4-202ENST00000392481 P0C880 135 aa5.1□□□□□ -1.59
RFC4-202ENST00000392481 R4GN34 69 aa5.08□□□□□ -1.6
RFC4-202ENST00000392481 H7BZZ5 65 aa5.06□□□□□ -1.6
RFC4-202ENST00000392481 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
RFC4-202ENST00000392481 TMEM258P61165 79 aa5.05□□□□□ -1.6
RFC4-202ENST00000392481 M0QZ58 72 aa5.04□□□□□ -1.6
RFC4-202ENST00000392481 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
RFC4-202ENST00000392481 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
RFC4-202ENST00000392481 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
RFC4-202ENST00000392481 SPANXA2-OT1Q8N9U9 137 aa5.02□□□□□ -1.61
RFC4-202ENST00000392481 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
RFC4-202ENST00000392481 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
RFC4-202ENST00000392481 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
RFC4-202ENST00000392481 ATP5EP56381 51 aaPredicted RBP4.97□□□□□ -1.61
RFC4-202ENST00000392481 MT1XP80297 61 aa4.97□□□□□ -1.61
RFC4-202ENST00000392481 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
RFC4-202ENST00000392481 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
RFC4-202ENST00000392481 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
RFC4-202ENST00000392481 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
RFC4-202ENST00000392481 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
RFC4-202ENST00000392481 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
RFC4-202ENST00000392481 KMT2DO14686 5537 aa4.87□□□□□ -1.63
RFC4-202ENST00000392481 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
RFC4-202ENST00000392481 COA5Q86WW8 74 aa4.86□□□□□ -1.63
RFC4-202ENST00000392481 NEBP20929 6669 aa4.85□□□□□ -1.63
RFC4-202ENST00000392481 KRTAP12-2P59991 146 aa4.85□□□□□ -1.63
RFC4-202ENST00000392481 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
RFC4-202ENST00000392481 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
RFC4-202ENST00000392481 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
RFC4-202ENST00000392481 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
RFC4-202ENST00000392481 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
RFC4-202ENST00000392481 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
RFC4-202ENST00000392481 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
RFC4-202ENST00000392481 SEC61GP60059 68 aa4.77□□□□□ -1.65
RFC4-202ENST00000392481 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
RFC4-202ENST00000392481 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
RFC4-202ENST00000392481 KRTAP10-12P60413 245 aa4.72□□□□□ -1.65
RFC4-202ENST00000392481 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
RFC4-202ENST00000392481 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
RFC4-202ENST00000392481 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
RFC4-202ENST00000392481 SPRR2EP22531 72 aa4.68□□□□□ -1.66
RFC4-202ENST00000392481 SPRR2BP35325 72 aa4.68□□□□□ -1.66
RFC4-202ENST00000392481 SPRR2AP35326 72 aa4.68□□□□□ -1.66
RFC4-202ENST00000392481 A0A1B0GU33 70 aa4.67□□□□□ -1.66
RFC4-202ENST00000392481 Q1T7F1 81 aa4.66□□□□□ -1.66
RFC4-202ENST00000392481 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
RFC4-202ENST00000392481 V9GYY9 64 aa4.65□□□□□ -1.66
RFC4-202ENST00000392481 A0A0D9SG42 100 aa4.64□□□□□ -1.67
RFC4-202ENST00000392481 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
RFC4-202ENST00000392481 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
RFC4-202ENST00000392481 A0A1B0GU69 56 aa4.62□□□□□ -1.67
RFC4-202ENST00000392481 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
RFC4-202ENST00000392481 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
RFC4-202ENST00000392481 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
RFC4-202ENST00000392481 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
RFC4-202ENST00000392481 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
RFC4-202ENST00000392481 PSPHP1O15172 72 aa4.58□□□□□ -1.68
RFC4-202ENST00000392481 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
RFC4-202ENST00000392481 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms