RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
HOMER3-202ENST00000392351 KRTAP9-6A0A140TA67 174 aa12.03□□□□□ -0.48
HOMER3-202ENST00000392351 ANAPC13Q9BS18 74 aa12.03□□□□□ -0.48
HOMER3-202ENST00000392351 MT1FP04733 61 aa12.01□□□□□ -0.49
HOMER3-202ENST00000392351 KRTAP10-10P60014 251 aa11.98□□□□□ -0.49
HOMER3-202ENST00000392351 NDUFC1O43677 76 aa11.96□□□□□ -0.49
HOMER3-202ENST00000392351 SPANXA2-OT1Q8N9U9 137 aa11.91□□□□□ -0.5
HOMER3-202ENST00000392351 ACYP2P14621 99 aa11.89□□□□□ -0.51
HOMER3-202ENST00000392351 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
HOMER3-202ENST00000392351 CRCT1Q9UGL9 99 aa11.82□□□□□ -0.52
HOMER3-202ENST00000392351 FSIP2Q5CZC0 6907 aa11.82□□□□□ -0.52
HOMER3-202ENST00000392351 H7BZZ5 65 aa11.78□□□□□ -0.52
HOMER3-202ENST00000392351 KRTAP9-3Q9BYQ3 159 aa11.78□□□□□ -0.52
HOMER3-202ENST00000392351 CCDC179H3BU77 68 aa11.76□□□□□ -0.53
HOMER3-202ENST00000392351 CHKB-CPT1BH3BT56 60 aa11.7□□□□□ -0.54
HOMER3-202ENST00000392351 H0YAA0 97 aa11.67□□□□□ -0.54
HOMER3-202ENST00000392351 PCP4P48539 62 aa11.67□□□□□ -0.54
HOMER3-202ENST00000392351 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
HOMER3-202ENST00000392351 LCE2BO14633 110 aa11.6□□□□□ -0.55
HOMER3-202ENST00000392351 ADM2Q7Z4H4 148 aa11.59□□□□□ -0.55
HOMER3-202ENST00000392351 COA5Q86WW8 74 aa11.56□□□□□ -0.56
HOMER3-202ENST00000392351 USH2AO75445 5202 aa11.54□□□□□ -0.56
HOMER3-202ENST00000392351 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
HOMER3-202ENST00000392351 CRIPTQ9P021 101 aa11.46□□□□□ -0.57
HOMER3-202ENST00000392351 SPRR2GQ9BYE4 73 aa11.43□□□□□ -0.58
HOMER3-202ENST00000392351 P0C880 135 aa11.42□□□□□ -0.58
HOMER3-202ENST00000392351 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
HOMER3-202ENST00000392351 ATP5EP56381 51 aaPredicted RBP11.4□□□□□ -0.58
HOMER3-202ENST00000392351 TMEM258P61165 79 aa11.37□□□□□ -0.59
HOMER3-202ENST00000392351 SSPOA2VEC9 5147 aa11.3□□□□□ -0.6
HOMER3-202ENST00000392351 R4GN34 69 aa11.26□□□□□ -0.61
HOMER3-202ENST00000392351 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
HOMER3-202ENST00000392351 Q5VV11 94 aa11.21□□□□□ -0.61
HOMER3-202ENST00000392351 M0QZ58 72 aa11.2□□□□□ -0.62
HOMER3-202ENST00000392351 MT1BP07438 61 aa11.17□□□□□ -0.62
HOMER3-202ENST00000392351 SEC61GP60059 68 aa11.12□□□□□ -0.63
HOMER3-202ENST00000392351 SERP1Q9Y6X1 66 aa11.08□□□□□ -0.64
HOMER3-202ENST00000392351 KRTAP19-6Q3LI70 58 aa11.07□□□□□ -0.64
HOMER3-202ENST00000392351 LINC01554Q52M75 96 aa11.03□□□□□ -0.64
HOMER3-202ENST00000392351 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.99□□□□□ -0.65
HOMER3-202ENST00000392351 FCGBPQ9Y6R7 5405 aaPredicted RBP10.99□□□□□ -0.65
HOMER3-202ENST00000392351 A0A1B0GU69 56 aa10.96□□□□□ -0.65
HOMER3-202ENST00000392351 KRTAP13-4Q3LI77 160 aa10.92□□□□□ -0.66
HOMER3-202ENST00000392351 PLAC4Q8WY50 150 aa10.89□□□□□ -0.67
HOMER3-202ENST00000392351 A0A1B0GU33 70 aa10.87□□□□□ -0.67
HOMER3-202ENST00000392351 RPS28P62857 69 aaKnown RBP10.85□□□□□ -0.67
HOMER3-202ENST00000392351 KRTAP9-7A8MTY7 169 aa10.84□□□□□ -0.67
HOMER3-202ENST00000392351 LINC01558Q9Y6Z2 57 aa10.84□□□□□ -0.67
HOMER3-202ENST00000392351 A6NN06 94 aa10.82□□□□□ -0.68
HOMER3-202ENST00000392351 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
HOMER3-202ENST00000392351 KRTAP10-5P60370 271 aa10.78□□□□□ -0.68
HOMER3-202ENST00000392351 SPATA8Q6RVD6 105 aa10.77□□□□□ -0.68
HOMER3-202ENST00000392351 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
HOMER3-202ENST00000392351 A0A0D9SG42 100 aa10.67□□□□□ -0.7
HOMER3-202ENST00000392351 MT1XP80297 61 aa10.64□□□□□ -0.71
HOMER3-202ENST00000392351 PRO2289Q9P1D8 64 aa10.64□□□□□ -0.71
HOMER3-202ENST00000392351 MACF1Q9UPN3 7388 aaKnown RBP10.62□□□□□ -0.71
HOMER3-202ENST00000392351 V9GYY9 64 aa10.59□□□□□ -0.71
HOMER3-202ENST00000392351 Q1T7F1 81 aa10.56□□□□□ -0.72
HOMER3-202ENST00000392351 A8MU10 97 aa10.5□□□□□ -0.73
HOMER3-202ENST00000392351 PSPHP1O15172 72 aa10.48□□□□□ -0.73
HOMER3-202ENST00000392351 SPINT4Q6UDR6 99 aa10.48□□□□□ -0.73
HOMER3-202ENST00000392351 UQCR11O14957 56 aa10.47□□□□□ -0.73
HOMER3-202ENST00000392351 KRTAP12-1P59990 96 aa10.45□□□□□ -0.74
HOMER3-202ENST00000392351 CAMK2N1Q7Z7J9 78 aa10.45□□□□□ -0.74
HOMER3-202ENST00000392351 SYNE2Q8WXH0 6885 aaKnown RBP10.45□□□□□ -0.74
HOMER3-202ENST00000392351 KRTAP12-2P59991 146 aa10.39□□□□□ -0.75
HOMER3-202ENST00000392351 MIR22HGQ0VDD5 57 aa10.29□□□□□ -0.76
HOMER3-202ENST00000392351 KRTAP6-3Q3LI67 103 aa10.29□□□□□ -0.76
HOMER3-202ENST00000392351 KRTAP10-7P60409 375 aaPredicted RBP10.18□□□□□ -0.78
HOMER3-202ENST00000392351 A6NED7 52 aa10.15□□□□□ -0.78
HOMER3-202ENST00000392351 KMT2DO14686 5537 aa10.12□□□□□ -0.79
HOMER3-202ENST00000392351 KRTAP10-12P60413 245 aa10.09□□□□□ -0.79
HOMER3-202ENST00000392351 KRTAP4-8A0A0G2JLE6 195 aa9.99□□□□□ -0.81
HOMER3-202ENST00000392351 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
HOMER3-202ENST00000392351 K7ERS5 55 aa9.97□□□□□ -0.81
HOMER3-202ENST00000392351 KRTAP8-1Q8IUC2 63 aa9.96□□□□□ -0.82
HOMER3-202ENST00000392351 C10orf95Q9H7T3 257 aa9.93□□□□□ -0.82
HOMER3-202ENST00000392351 KRTAP5-9P26371 169 aa9.91□□□□□ -0.82
HOMER3-202ENST00000392351 MUC12Q9UKN1 5478 aa9.9□□□□□ -0.83
HOMER3-202ENST00000392351 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
HOMER3-202ENST00000392351 SPRR2FQ96RM1 72 aa9.8□□□□□ -0.84
HOMER3-202ENST00000392351 TNP1P09430 55 aa9.78□□□□□ -0.84
HOMER3-202ENST00000392351 NEBP20929 6669 aa9.76□□□□□ -0.85
HOMER3-202ENST00000392351 BRK1Q8WUW1 75 aa9.67□□□□□ -0.86
HOMER3-202ENST00000392351 MDN1Q9NU22 5596 aa9.65□□□□□ -0.87
HOMER3-202ENST00000392351 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
HOMER3-202ENST00000392351 LCE3AQ5TA76 89 aa9.54□□□□□ -0.88
HOMER3-202ENST00000392351 SPRR2EP22531 72 aa9.5□□□□□ -0.89
HOMER3-202ENST00000392351 SPRR2BP35325 72 aa9.5□□□□□ -0.89
HOMER3-202ENST00000392351 SPRR2AP35326 72 aa9.5□□□□□ -0.89
HOMER3-202ENST00000392351 KRTAP20-1Q3LI63 56 aa9.5□□□□□ -0.89
HOMER3-202ENST00000392351 KRTAP19-7Q3SYF9 63 aa9.5□□□□□ -0.89
HOMER3-202ENST00000392351 LCE1AQ5T7P2 110 aa9.44□□□□□ -0.9
HOMER3-202ENST00000392351 KRTAP19-5Q3LI72 72 aa9.43□□□□□ -0.9
HOMER3-202ENST00000392351 ROMO1P60602 79 aa9.41□□□□□ -0.9
HOMER3-202ENST00000392351 MT1EP04732 61 aa9.38□□□□□ -0.91
HOMER3-202ENST00000392351 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
HOMER3-202ENST00000392351 KRTAP2-3P0C7H8 128 aa9.27□□□□□ -0.93
HOMER3-202ENST00000392351 KRTAP2-4Q9BYR9 128 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms