RNA–Protein interactions for RNA: ENST00000389900.8

RNF216-201, Transcript of ring finger protein 216, humanhuman

TSL 1 (best)

Gene RNF216, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216-201ENST00000389900 Q8N1X5 172 aa4.99□□□□□ -1.61
RNF216-201ENST00000389900 DYNC1H1Q14204 4646 aaKnown RBP4.98□□□□□ -1.61
RNF216-201ENST00000389900 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
RNF216-201ENST00000389900 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
RNF216-201ENST00000389900 R4GN34 69 aa4.95□□□□□ -1.62
RNF216-201ENST00000389900 DNAH11Q96DT5 4516 aa4.94□□□□□ -1.62
RNF216-201ENST00000389900 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
RNF216-201ENST00000389900 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
RNF216-201ENST00000389900 HSPG2P98160 4391 aa4.92□□□□□ -1.62
RNF216-201ENST00000389900 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
RNF216-201ENST00000389900 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.62
RNF216-201ENST00000389900 SPINK6Q6UWN8 80 aa4.9□□□□□ -1.63
RNF216-201ENST00000389900 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
RNF216-201ENST00000389900 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
RNF216-201ENST00000389900 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
RNF216-201ENST00000389900 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
RNF216-201ENST00000389900 A0A0D9SG42 100 aa4.83□□□□□ -1.64
RNF216-201ENST00000389900 HERC1Q15751 4861 aa4.82□□□□□ -1.64
RNF216-201ENST00000389900 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
RNF216-201ENST00000389900 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
RNF216-201ENST00000389900 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
RNF216-201ENST00000389900 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
RNF216-201ENST00000389900 FAT1Q14517 4588 aa4.78□□□□□ -1.64
RNF216-201ENST00000389900 DMBT1Q9UGM3 2413 aaPredicted RBP4.78□□□□□ -1.64
RNF216-201ENST00000389900 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
RNF216-201ENST00000389900 XP32Q5T750 250 aa4.77□□□□□ -1.65
RNF216-201ENST00000389900 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
RNF216-201ENST00000389900 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
RNF216-201ENST00000389900 S4R3F8 94 aa4.74□□□□□ -1.65
RNF216-201ENST00000389900 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
RNF216-201ENST00000389900 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
RNF216-201ENST00000389900 INE1O15225 51 aa4.67□□□□□ -1.66
RNF216-201ENST00000389900 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
RNF216-201ENST00000389900 KRTAP12-2P59991 146 aa4.63□□□□□ -1.67
RNF216-201ENST00000389900 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
RNF216-201ENST00000389900 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
RNF216-201ENST00000389900 Q5VSD8 79 aa4.61□□□□□ -1.67
RNF216-201ENST00000389900 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
RNF216-201ENST00000389900 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
RNF216-201ENST00000389900 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RNF216-201ENST00000389900 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
RNF216-201ENST00000389900 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
RNF216-201ENST00000389900 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
RNF216-201ENST00000389900 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
RNF216-201ENST00000389900 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
RNF216-201ENST00000389900 TNXBP22105 4242 aa4.44□□□□□ -1.7
RNF216-201ENST00000389900 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
RNF216-201ENST00000389900 LRP2P98164 4655 aa4.42□□□□□ -1.7
RNF216-201ENST00000389900 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
RNF216-201ENST00000389900 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
RNF216-201ENST00000389900 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
RNF216-201ENST00000389900 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.71
RNF216-201ENST00000389900 LPAP08519 4548 aa4.32□□□□□ -1.72
RNF216-201ENST00000389900 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
RNF216-201ENST00000389900 MUC2Q02817 5179 aa4.26□□□□□ -1.73
RNF216-201ENST00000389900 M0QZ58 72 aa4.26□□□□□ -1.73
RNF216-201ENST00000389900 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
RNF216-201ENST00000389900 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
RNF216-201ENST00000389900 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
RNF216-201ENST00000389900 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
RNF216-201ENST00000389900 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
RNF216-201ENST00000389900 KRTAP4-1Q9BYQ7 146 aa3.97□□□□□ -1.77
RNF216-201ENST00000389900 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
RNF216-201ENST00000389900 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
RNF216-201ENST00000389900 TNP1P09430 55 aa3.86□□□□□ -1.79
RNF216-201ENST00000389900 KRTAP19-2Q3LHN2 52 aa3.86□□□□□ -1.79
RNF216-201ENST00000389900 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
RNF216-201ENST00000389900 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
RNF216-201ENST00000389900 M0R2T5 61 aa3.81□□□□□ -1.8
RNF216-201ENST00000389900 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
RNF216-201ENST00000389900 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
RNF216-201ENST00000389900 MT1HP80294 61 aa3.71□□□□□ -1.82
RNF216-201ENST00000389900 LCE2BO14633 110 aa3.64□□□□□ -1.83
RNF216-201ENST00000389900 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
RNF216-201ENST00000389900 USH2AO75445 5202 aa3.61□□□□□ -1.83
RNF216-201ENST00000389900 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
RNF216-201ENST00000389900 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
RNF216-201ENST00000389900 MT2AP02795 61 aa3.57□□□□□ -1.84
RNF216-201ENST00000389900 MT1FP04733 61 aa3.55□□□□□ -1.84
RNF216-201ENST00000389900 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
RNF216-201ENST00000389900 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
RNF216-201ENST00000389900 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
RNF216-201ENST00000389900 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
RNF216-201ENST00000389900 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
RNF216-201ENST00000389900 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
RNF216-201ENST00000389900 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
RNF216-201ENST00000389900 KRTAP10-12P60413 245 aa3.46□□□□□ -1.85
RNF216-201ENST00000389900 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
RNF216-201ENST00000389900 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
RNF216-201ENST00000389900 KRTAP9-3Q9BYQ3 159 aa3.41□□□□□ -1.86
RNF216-201ENST00000389900 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
RNF216-201ENST00000389900 MT1BP07438 61 aa3.38□□□□□ -1.87
RNF216-201ENST00000389900 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
RNF216-201ENST00000389900 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
RNF216-201ENST00000389900 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
RNF216-201ENST00000389900 MT1XP80297 61 aa3.33□□□□□ -1.88
RNF216-201ENST00000389900 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
RNF216-201ENST00000389900 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
RNF216-201ENST00000389900 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
RNF216-201ENST00000389900 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms