RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
HCG27-201ENST00000383331 LOC100996750A0A140TA64 210 aa7.76□□□□□ -1.17
HCG27-201ENST00000383331 KRTAP4-6Q9BYQ5 205 aa7.76□□□□□ -1.17
HCG27-201ENST00000383331 Q5VV11 94 aa7.72□□□□□ -1.17
HCG27-201ENST00000383331 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
HCG27-201ENST00000383331 PRR15LQ9BU68 103 aa7.72□□□□□ -1.17
HCG27-201ENST00000383331 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
HCG27-201ENST00000383331 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
HCG27-201ENST00000383331 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
HCG27-201ENST00000383331 A0A1B0GU69 56 aa7.57□□□□□ -1.2
HCG27-201ENST00000383331 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
HCG27-201ENST00000383331 PRO0628Q9UI54 55 aa7.55□□□□□ -1.2
HCG27-201ENST00000383331 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
HCG27-201ENST00000383331 A6NED7 52 aa7.52□□□□□ -1.21
HCG27-201ENST00000383331 RBM12B-AS1Q9P1G2 102 aa7.52□□□□□ -1.21
HCG27-201ENST00000383331 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
HCG27-201ENST00000383331 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
HCG27-201ENST00000383331 LCA10Q71F78 164 aa7.47□□□□□ -1.21
HCG27-201ENST00000383331 A8MU10 97 aa7.45□□□□□ -1.22
HCG27-201ENST00000383331 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
HCG27-201ENST00000383331 S4R3F8 94 aa7.45□□□□□ -1.22
HCG27-201ENST00000383331 SEC61GP60059 68 aa7.44□□□□□ -1.22
HCG27-201ENST00000383331 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
HCG27-201ENST00000383331 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
HCG27-201ENST00000383331 UQCR11O14957 56 aa7.38□□□□□ -1.23
HCG27-201ENST00000383331 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
HCG27-201ENST00000383331 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
HCG27-201ENST00000383331 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
HCG27-201ENST00000383331 A0A1B0GU33 70 aa7.28□□□□□ -1.24
HCG27-201ENST00000383331 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
HCG27-201ENST00000383331 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
HCG27-201ENST00000383331 H0YAA0 97 aa7.23□□□□□ -1.25
HCG27-201ENST00000383331 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
HCG27-201ENST00000383331 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
HCG27-201ENST00000383331 P0C880 135 aa7.17□□□□□ -1.26
HCG27-201ENST00000383331 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
HCG27-201ENST00000383331 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
HCG27-201ENST00000383331 A6NN06 94 aa7.15□□□□□ -1.27
HCG27-201ENST00000383331 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
HCG27-201ENST00000383331 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
HCG27-201ENST00000383331 MT1HP80294 61 aa7.09□□□□□ -1.27
HCG27-201ENST00000383331 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
HCG27-201ENST00000383331 M0QZ58 72 aa6.98□□□□□ -1.29
HCG27-201ENST00000383331 M0R2T5 61 aa6.98□□□□□ -1.29
HCG27-201ENST00000383331 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
HCG27-201ENST00000383331 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.29
HCG27-201ENST00000383331 KTN1-AS1Q86SY8 53 aa6.96□□□□□ -1.3
HCG27-201ENST00000383331 A0A0D9SG42 100 aa6.94□□□□□ -1.3
HCG27-201ENST00000383331 H3BS24 57 aa6.93□□□□□ -1.3
HCG27-201ENST00000383331 K7ERS5 55 aa6.92□□□□□ -1.3
HCG27-201ENST00000383331 R4GN34 69 aa6.87□□□□□ -1.31
HCG27-201ENST00000383331 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
HCG27-201ENST00000383331 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
HCG27-201ENST00000383331 LCE2BO14633 110 aa6.79□□□□□ -1.32
HCG27-201ENST00000383331 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
HCG27-201ENST00000383331 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
HCG27-201ENST00000383331 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
HCG27-201ENST00000383331 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
HCG27-201ENST00000383331 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
HCG27-201ENST00000383331 MT2AP02795 61 aa6.7□□□□□ -1.34
HCG27-201ENST00000383331 ROMO1P60602 79 aa6.7□□□□□ -1.34
HCG27-201ENST00000383331 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
HCG27-201ENST00000383331 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
HCG27-201ENST00000383331 MT1FP04733 61 aa6.64□□□□□ -1.35
HCG27-201ENST00000383331 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
HCG27-201ENST00000383331 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.36
HCG27-201ENST00000383331 USH2AO75445 5202 aa6.57□□□□□ -1.36
HCG27-201ENST00000383331 SSPOA2VEC9 5147 aa6.56□□□□□ -1.36
HCG27-201ENST00000383331 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
HCG27-201ENST00000383331 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
HCG27-201ENST00000383331 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
HCG27-201ENST00000383331 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
HCG27-201ENST00000383331 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
HCG27-201ENST00000383331 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
HCG27-201ENST00000383331 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
HCG27-201ENST00000383331 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
HCG27-201ENST00000383331 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
HCG27-201ENST00000383331 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
HCG27-201ENST00000383331 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
HCG27-201ENST00000383331 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
HCG27-201ENST00000383331 MT1BP07438 61 aa6.31□□□□□ -1.4
HCG27-201ENST00000383331 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
HCG27-201ENST00000383331 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
HCG27-201ENST00000383331 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
HCG27-201ENST00000383331 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
HCG27-201ENST00000383331 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
HCG27-201ENST00000383331 TNP1P09430 55 aa6.19□□□□□ -1.42
HCG27-201ENST00000383331 MT1XP80297 61 aa6.13□□□□□ -1.43
HCG27-201ENST00000383331 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
HCG27-201ENST00000383331 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
HCG27-201ENST00000383331 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
HCG27-201ENST00000383331 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
HCG27-201ENST00000383331 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
HCG27-201ENST00000383331 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
HCG27-201ENST00000383331 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
HCG27-201ENST00000383331 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
HCG27-201ENST00000383331 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
HCG27-201ENST00000383331 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
HCG27-201ENST00000383331 LCE1DQ5T752 114 aa5.9□□□□□ -1.47
HCG27-201ENST00000383331 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms