RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 MUC17Q685J3 4493 aa10.4□□□□□ -0.74
MSLN-201ENST00000382862 A8MU10 97 aa10.33□□□□□ -0.76
MSLN-201ENST00000382862 CDC42SE1Q9NRR8 79 aa10.33□□□□□ -0.76
MSLN-201ENST00000382862 KRTAP3-1Q9BYR8 98 aa10.32□□□□□ -0.76
MSLN-201ENST00000382862 LCA10Q71F78 164 aa10.3□□□□□ -0.76
MSLN-201ENST00000382862 KRTAP4-1Q9BYQ7 146 aa10.29□□□□□ -0.76
MSLN-201ENST00000382862 MUC2Q02817 5179 aa10.27□□□□□ -0.77
MSLN-201ENST00000382862 SEC61BP60468 96 aaKnown RBP10.26□□□□□ -0.77
MSLN-201ENST00000382862 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
MSLN-201ENST00000382862 A0A1B0GU69 56 aa10.24□□□□□ -0.77
MSLN-201ENST00000382862 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
MSLN-201ENST00000382862 COX6B2Q6YFQ2 88 aa10.2□□□□□ -0.78
MSLN-201ENST00000382862 UBR4Q5T4S7 5183 aa10.17□□□□□ -0.78
MSLN-201ENST00000382862 RNF213Q63HN8 5207 aa10.06□□□□□ -0.8
MSLN-201ENST00000382862 UQCR11O14957 56 aa10.06□□□□□ -0.8
MSLN-201ENST00000382862 A6NN06 94 aa10.03□□□□□ -0.8
MSLN-201ENST00000382862 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
MSLN-201ENST00000382862 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
MSLN-201ENST00000382862 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
MSLN-201ENST00000382862 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
MSLN-201ENST00000382862 KRTAP19-2Q3LHN2 52 aa9.98□□□□□ -0.81
MSLN-201ENST00000382862 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
MSLN-201ENST00000382862 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
MSLN-201ENST00000382862 S4R3F8 94 aa9.89□□□□□ -0.83
MSLN-201ENST00000382862 FLGP20930 4061 aaPredicted RBP9.88□□□□□ -0.83
MSLN-201ENST00000382862 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
MSLN-201ENST00000382862 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
MSLN-201ENST00000382862 A0A1B0GU33 70 aa9.72□□□□□ -0.85
MSLN-201ENST00000382862 H0YAA0 97 aa9.64□□□□□ -0.87
MSLN-201ENST00000382862 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
MSLN-201ENST00000382862 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
MSLN-201ENST00000382862 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
MSLN-201ENST00000382862 H3BS24 57 aa9.54□□□□□ -0.88
MSLN-201ENST00000382862 P0C880 135 aa9.51□□□□□ -0.89
MSLN-201ENST00000382862 MT1HP80294 61 aa9.5□□□□□ -0.89
MSLN-201ENST00000382862 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
MSLN-201ENST00000382862 K7ERS5 55 aa9.47□□□□□ -0.89
MSLN-201ENST00000382862 PRAC1Q96KF2 57 aa9.47□□□□□ -0.89
MSLN-201ENST00000382862 KRTAP13-4Q3LI77 160 aa9.35□□□□□ -0.91
MSLN-201ENST00000382862 M0R2T5 61 aa9.34□□□□□ -0.91
MSLN-201ENST00000382862 LORP23490 312 aaPredicted RBP9.33□□□□□ -0.92
MSLN-201ENST00000382862 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
MSLN-201ENST00000382862 A0A0D9SG42 100 aa9.19□□□□□ -0.94
MSLN-201ENST00000382862 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
MSLN-201ENST00000382862 MT2AP02795 61 aa9.14□□□□□ -0.95
MSLN-201ENST00000382862 M0QZ58 72 aa9.13□□□□□ -0.95
MSLN-201ENST00000382862 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
MSLN-201ENST00000382862 ROMO1P60602 79 aa9.13□□□□□ -0.95
MSLN-201ENST00000382862 MT1FP04733 61 aa9.11□□□□□ -0.95
MSLN-201ENST00000382862 KRTAP25-1Q3LHN0 102 aa9.11□□□□□ -0.95
MSLN-201ENST00000382862 R4GN34 69 aa9.1□□□□□ -0.95
MSLN-201ENST00000382862 KRTAP10-10P60014 251 aa9□□□□□ -0.97
MSLN-201ENST00000382862 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
MSLN-201ENST00000382862 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
MSLN-201ENST00000382862 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
MSLN-201ENST00000382862 KRTAP19-1Q8IUB9 90 aa8.94□□□□□ -0.98
MSLN-201ENST00000382862 CRIPTQ9P021 101 aa8.93□□□□□ -0.98
MSLN-201ENST00000382862 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
MSLN-201ENST00000382862 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
MSLN-201ENST00000382862 A0A0A0MQY5 61 aa8.68□□□□□ -1.02
MSLN-201ENST00000382862 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
MSLN-201ENST00000382862 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
MSLN-201ENST00000382862 LCE2BO14633 110 aa8.63□□□□□ -1.03
MSLN-201ENST00000382862 MT1BP07438 61 aa8.62□□□□□ -1.03
MSLN-201ENST00000382862 USH2AO75445 5202 aa8.56□□□□□ -1.04
MSLN-201ENST00000382862 CAMK2N1Q7Z7J9 78 aa8.51□□□□□ -1.05
MSLN-201ENST00000382862 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
MSLN-201ENST00000382862 MT1XP80297 61 aa8.33□□□□□ -1.08
MSLN-201ENST00000382862 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
MSLN-201ENST00000382862 SSPOA2VEC9 5147 aa8.31□□□□□ -1.08
MSLN-201ENST00000382862 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
MSLN-201ENST00000382862 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
MSLN-201ENST00000382862 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
MSLN-201ENST00000382862 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
MSLN-201ENST00000382862 TNP1P09430 55 aa8.11□□□□□ -1.11
MSLN-201ENST00000382862 PRO2289Q9P1D8 64 aa8.05□□□□□ -1.12
MSLN-201ENST00000382862 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
MSLN-201ENST00000382862 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
MSLN-201ENST00000382862 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
MSLN-201ENST00000382862 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
MSLN-201ENST00000382862 NDUFAF8A1L188 74 aa7.96□□□□□ -1.14
MSLN-201ENST00000382862 KMT2DO14686 5537 aa7.94□□□□□ -1.14
MSLN-201ENST00000382862 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.15
MSLN-201ENST00000382862 LCE3AQ5TA76 89 aa7.87□□□□□ -1.15
MSLN-201ENST00000382862 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
MSLN-201ENST00000382862 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
MSLN-201ENST00000382862 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
MSLN-201ENST00000382862 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
MSLN-201ENST00000382862 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
MSLN-201ENST00000382862 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
MSLN-201ENST00000382862 MACF1Q9UPN3 7388 aaKnown RBP7.56□□□□□ -1.2
MSLN-201ENST00000382862 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.2
MSLN-201ENST00000382862 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
MSLN-201ENST00000382862 KRTAP12-3P60328 96 aa7.49□□□□□ -1.21
MSLN-201ENST00000382862 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
MSLN-201ENST00000382862 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
MSLN-201ENST00000382862 MUC12Q9UKN1 5478 aa7.32□□□□□ -1.24
MSLN-201ENST00000382862 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
MSLN-201ENST00000382862 MT1EP04732 61 aa7.28□□□□□ -1.24
MSLN-201ENST00000382862 SPRR2FQ96RM1 72 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms