RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 MT2AP02795 61 aa8.41□□□□□ -1.06
CD9-202ENST00000382515 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
CD9-202ENST00000382515 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
CD9-202ENST00000382515 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
CD9-202ENST00000382515 KRTAP4-6Q9BYQ5 205 aa8.37□□□□□ -1.07
CD9-202ENST00000382515 NDUFC1O43677 76 aa8.36□□□□□ -1.07
CD9-202ENST00000382515 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
CD9-202ENST00000382515 C20orf197Q8N268 126 aa8.34□□□□□ -1.07
CD9-202ENST00000382515 MT1FP04733 61 aa8.33□□□□□ -1.08
CD9-202ENST00000382515 COX7CP15954 63 aa8.32□□□□□ -1.08
CD9-202ENST00000382515 SNURFQ9Y675 71 aa8.32□□□□□ -1.08
CD9-202ENST00000382515 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
CD9-202ENST00000382515 ACYP2P14621 99 aa8.29□□□□□ -1.08
CD9-202ENST00000382515 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
CD9-202ENST00000382515 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
CD9-202ENST00000382515 H0YAA0 97 aa8.21□□□□□ -1.1
CD9-202ENST00000382515 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
CD9-202ENST00000382515 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
CD9-202ENST00000382515 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
CD9-202ENST00000382515 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CD9-202ENST00000382515 H7BZZ5 65 aa8.07□□□□□ -1.12
CD9-202ENST00000382515 USH2AO75445 5202 aa8.05□□□□□ -1.12
CD9-202ENST00000382515 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
CD9-202ENST00000382515 SPRR2GQ9BYE4 73 aa8.01□□□□□ -1.13
CD9-202ENST00000382515 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
CD9-202ENST00000382515 CYSTM1Q9H1C7 97 aa7.98□□□□□ -1.13
CD9-202ENST00000382515 CCDC179H3BU77 68 aa7.96□□□□□ -1.14
CD9-202ENST00000382515 COA5Q86WW8 74 aa7.94□□□□□ -1.14
CD9-202ENST00000382515 KRTAP9-7A8MTY7 169 aa7.92□□□□□ -1.14
CD9-202ENST00000382515 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
CD9-202ENST00000382515 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
CD9-202ENST00000382515 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
CD9-202ENST00000382515 P0C880 135 aa7.86□□□□□ -1.15
CD9-202ENST00000382515 Q5VV11 94 aa7.86□□□□□ -1.15
CD9-202ENST00000382515 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
CD9-202ENST00000382515 R4GN34 69 aa7.85□□□□□ -1.15
CD9-202ENST00000382515 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
CD9-202ENST00000382515 TMEM258P61165 79 aa7.79□□□□□ -1.16
CD9-202ENST00000382515 SEC61GP60059 68 aa7.78□□□□□ -1.16
CD9-202ENST00000382515 MT1BP07438 61 aa7.76□□□□□ -1.17
CD9-202ENST00000382515 M0QZ58 72 aa7.75□□□□□ -1.17
CD9-202ENST00000382515 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
CD9-202ENST00000382515 FCGBPQ9Y6R7 5405 aaPredicted RBP7.69□□□□□ -1.18
CD9-202ENST00000382515 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
CD9-202ENST00000382515 A6NN06 94 aa7.59□□□□□ -1.19
CD9-202ENST00000382515 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
CD9-202ENST00000382515 A0A1B0GU69 56 aa7.57□□□□□ -1.2
CD9-202ENST00000382515 A0A1B0GU33 70 aa7.55□□□□□ -1.2
CD9-202ENST00000382515 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
CD9-202ENST00000382515 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
CD9-202ENST00000382515 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
CD9-202ENST00000382515 SYNE2Q8WXH0 6885 aaKnown RBP7.51□□□□□ -1.21
CD9-202ENST00000382515 PCP4P48539 62 aa7.5□□□□□ -1.21
CD9-202ENST00000382515 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
CD9-202ENST00000382515 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
CD9-202ENST00000382515 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
CD9-202ENST00000382515 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
CD9-202ENST00000382515 MT1XP80297 61 aa7.38□□□□□ -1.23
CD9-202ENST00000382515 V9GYY9 64 aa7.38□□□□□ -1.23
CD9-202ENST00000382515 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
CD9-202ENST00000382515 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
CD9-202ENST00000382515 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
CD9-202ENST00000382515 A0A0D9SG42 100 aa7.31□□□□□ -1.24
CD9-202ENST00000382515 Q1T7F1 81 aa7.28□□□□□ -1.24
CD9-202ENST00000382515 UQCR11O14957 56 aa7.27□□□□□ -1.25
CD9-202ENST00000382515 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
CD9-202ENST00000382515 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
CD9-202ENST00000382515 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
CD9-202ENST00000382515 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
CD9-202ENST00000382515 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
CD9-202ENST00000382515 A8MU10 97 aa7.15□□□□□ -1.26
CD9-202ENST00000382515 PSPHP1O15172 72 aa7.11□□□□□ -1.27
CD9-202ENST00000382515 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
CD9-202ENST00000382515 NEBP20929 6669 aa7.08□□□□□ -1.28
CD9-202ENST00000382515 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
CD9-202ENST00000382515 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
CD9-202ENST00000382515 KRTAP9-9Q9BYP9 154 aa7.03□□□□□ -1.28
CD9-202ENST00000382515 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
CD9-202ENST00000382515 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
CD9-202ENST00000382515 KRTAP5-9P26371 169 aa7□□□□□ -1.29
CD9-202ENST00000382515 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
CD9-202ENST00000382515 KMT2DO14686 5537 aa6.99□□□□□ -1.29
CD9-202ENST00000382515 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
CD9-202ENST00000382515 K7ERS5 55 aa6.98□□□□□ -1.29
CD9-202ENST00000382515 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
CD9-202ENST00000382515 A6NED7 52 aa6.94□□□□□ -1.3
CD9-202ENST00000382515 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
CD9-202ENST00000382515 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
CD9-202ENST00000382515 TNP1P09430 55 aa6.84□□□□□ -1.31
CD9-202ENST00000382515 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
CD9-202ENST00000382515 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
CD9-202ENST00000382515 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
CD9-202ENST00000382515 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
CD9-202ENST00000382515 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
CD9-202ENST00000382515 H3BS24 57 aa6.72□□□□□ -1.33
CD9-202ENST00000382515 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
CD9-202ENST00000382515 SPRR2EP22531 72 aa6.63□□□□□ -1.35
CD9-202ENST00000382515 SPRR2BP35325 72 aa6.63□□□□□ -1.35
CD9-202ENST00000382515 SPRR2AP35326 72 aa6.63□□□□□ -1.35
CD9-202ENST00000382515 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms