RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
CDPF1-202ENST00000381037 KRTAP9-2Q9BYQ4 174 aa9.74□□□□□ -0.85
CDPF1-202ENST00000381037 KRTAP9-8Q9BYQ0 159 aa9.73□□□□□ -0.85
CDPF1-202ENST00000381037 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
CDPF1-202ENST00000381037 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
CDPF1-202ENST00000381037 LOC101927531A0A1B0GV80 90 aa9.71□□□□□ -0.85
CDPF1-202ENST00000381037 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.86
CDPF1-202ENST00000381037 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
CDPF1-202ENST00000381037 MT2AP02795 61 aa9.6□□□□□ -0.87
CDPF1-202ENST00000381037 Q1T7F1 81 aa9.53□□□□□ -0.88
CDPF1-202ENST00000381037 MT1FP04733 61 aa9.53□□□□□ -0.88
CDPF1-202ENST00000381037 V9GYY9 64 aa9.51□□□□□ -0.89
CDPF1-202ENST00000381037 S4R3F8 94 aa9.47□□□□□ -0.89
CDPF1-202ENST00000381037 LCA10Q71F78 164 aa9.45□□□□□ -0.9
CDPF1-202ENST00000381037 KRTAP10-10P60014 251 aa9.44□□□□□ -0.9
CDPF1-202ENST00000381037 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
CDPF1-202ENST00000381037 COA5Q86WW8 74 aa9.41□□□□□ -0.9
CDPF1-202ENST00000381037 KRTAP9-3Q9BYQ3 159 aa9.41□□□□□ -0.9
CDPF1-202ENST00000381037 FSIP2Q5CZC0 6907 aa9.41□□□□□ -0.9
CDPF1-202ENST00000381037 A8MUN3 132 aa9.38□□□□□ -0.91
CDPF1-202ENST00000381037 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
CDPF1-202ENST00000381037 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
CDPF1-202ENST00000381037 USH2AO75445 5202 aa9.32□□□□□ -0.92
CDPF1-202ENST00000381037 ACYP2P14621 99 aa9.29□□□□□ -0.92
CDPF1-202ENST00000381037 LCE2BO14633 110 aa9.28□□□□□ -0.92
CDPF1-202ENST00000381037 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
CDPF1-202ENST00000381037 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
CDPF1-202ENST00000381037 CRCT1Q9UGL9 99 aa9.26□□□□□ -0.93
CDPF1-202ENST00000381037 PSPHP1O15172 72 aa9.24□□□□□ -0.93
CDPF1-202ENST00000381037 BRK1Q8WUW1 75 aa9.24□□□□□ -0.93
CDPF1-202ENST00000381037 LINC01558Q9Y6Z2 57 aa9.23□□□□□ -0.93
CDPF1-202ENST00000381037 Q5VV11 94 aa9.2□□□□□ -0.94
CDPF1-202ENST00000381037 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
CDPF1-202ENST00000381037 SSPOA2VEC9 5147 aa9.15□□□□□ -0.94
CDPF1-202ENST00000381037 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
CDPF1-202ENST00000381037 H0YAA0 97 aa9.1□□□□□ -0.95
CDPF1-202ENST00000381037 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
CDPF1-202ENST00000381037 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.96
CDPF1-202ENST00000381037 A6NED7 52 aa9□□□□□ -0.97
CDPF1-202ENST00000381037 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.98
CDPF1-202ENST00000381037 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
CDPF1-202ENST00000381037 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
CDPF1-202ENST00000381037 KRTAP19-8Q3LI54 63 aa8.91□□□□□ -0.98
CDPF1-202ENST00000381037 FCGBPQ9Y6R7 5405 aaPredicted RBP8.9□□□□□ -0.98
CDPF1-202ENST00000381037 A0A1B0GU69 56 aa8.9□□□□□ -0.99
CDPF1-202ENST00000381037 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.99
CDPF1-202ENST00000381037 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
CDPF1-202ENST00000381037 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
CDPF1-202ENST00000381037 MT1BP07438 61 aa8.87□□□□□ -0.99
CDPF1-202ENST00000381037 P0C880 135 aa8.85□□□□□ -0.99
CDPF1-202ENST00000381037 A8MU10 97 aa8.8□□□□□ -1
CDPF1-202ENST00000381037 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
CDPF1-202ENST00000381037 SEC61GP60059 68 aa8.76□□□□□ -1.01
CDPF1-202ENST00000381037 UQCR11O14957 56 aa8.74□□□□□ -1.01
CDPF1-202ENST00000381037 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
CDPF1-202ENST00000381037 R4GN34 69 aa8.69□□□□□ -1.02
CDPF1-202ENST00000381037 A6NN06 94 aa8.66□□□□□ -1.02
CDPF1-202ENST00000381037 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
CDPF1-202ENST00000381037 M0QZ58 72 aa8.64□□□□□ -1.03
CDPF1-202ENST00000381037 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CDPF1-202ENST00000381037 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
CDPF1-202ENST00000381037 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
CDPF1-202ENST00000381037 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.05
CDPF1-202ENST00000381037 A0A1B0GU33 70 aa8.49□□□□□ -1.05
CDPF1-202ENST00000381037 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
CDPF1-202ENST00000381037 PLAC4Q8WY50 150 aa8.46□□□□□ -1.06
CDPF1-202ENST00000381037 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
CDPF1-202ENST00000381037 MT1XP80297 61 aa8.4□□□□□ -1.07
CDPF1-202ENST00000381037 SYNE2Q8WXH0 6885 aaKnown RBP8.38□□□□□ -1.07
CDPF1-202ENST00000381037 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
CDPF1-202ENST00000381037 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
CDPF1-202ENST00000381037 K7ERS5 55 aa8.24□□□□□ -1.09
CDPF1-202ENST00000381037 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
CDPF1-202ENST00000381037 A0A0D9SG42 100 aa8.14□□□□□ -1.11
CDPF1-202ENST00000381037 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
CDPF1-202ENST00000381037 KMT2DO14686 5537 aa8.1□□□□□ -1.11
CDPF1-202ENST00000381037 PRAC1Q96KF2 57 aa8.1□□□□□ -1.11
CDPF1-202ENST00000381037 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CDPF1-202ENST00000381037 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
CDPF1-202ENST00000381037 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
CDPF1-202ENST00000381037 KRTAP5-9P26371 169 aa8□□□□□ -1.13
CDPF1-202ENST00000381037 SPINT4Q6UDR6 99 aa7.99□□□□□ -1.13
CDPF1-202ENST00000381037 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
CDPF1-202ENST00000381037 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
CDPF1-202ENST00000381037 ROMO1P60602 79 aa7.94□□□□□ -1.14
CDPF1-202ENST00000381037 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
CDPF1-202ENST00000381037 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
CDPF1-202ENST00000381037 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
CDPF1-202ENST00000381037 KRTAP8-1Q8IUC2 63 aa7.86□□□□□ -1.15
CDPF1-202ENST00000381037 MDN1Q9NU22 5596 aa7.83□□□□□ -1.16
CDPF1-202ENST00000381037 NEBP20929 6669 aa7.82□□□□□ -1.16
CDPF1-202ENST00000381037 SPRR2FQ96RM1 72 aa7.78□□□□□ -1.16
CDPF1-202ENST00000381037 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
CDPF1-202ENST00000381037 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
CDPF1-202ENST00000381037 SPRR2EP22531 72 aa7.56□□□□□ -1.2
CDPF1-202ENST00000381037 SPRR2BP35325 72 aa7.56□□□□□ -1.2
CDPF1-202ENST00000381037 SPRR2AP35326 72 aa7.56□□□□□ -1.2
CDPF1-202ENST00000381037 TNP1P09430 55 aa7.52□□□□□ -1.21
CDPF1-202ENST00000381037 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.21
CDPF1-202ENST00000381037 MT1EP04732 61 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms