RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 PKHD1P08F94 4074 aa3.59□□□□□ -1.83
RIPK1-202ENST00000380409 RYR1P21817 5038 aa3.59□□□□□ -1.84
RIPK1-202ENST00000380409 A0A1B0GU33 70 aa3.58□□□□□ -1.84
RIPK1-202ENST00000380409 DNAH2Q9P225 4427 aa3.54□□□□□ -1.84
RIPK1-202ENST00000380409 FAT1Q14517 4588 aa3.52□□□□□ -1.85
RIPK1-202ENST00000380409 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
RIPK1-202ENST00000380409 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
RIPK1-202ENST00000380409 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
RIPK1-202ENST00000380409 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
RIPK1-202ENST00000380409 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
RIPK1-202ENST00000380409 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
RIPK1-202ENST00000380409 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
RIPK1-202ENST00000380409 DNAH5Q8TE73 4624 aa3.49□□□□□ -1.85
RIPK1-202ENST00000380409 MYCBP2O75592 4640 aa3.49□□□□□ -1.85
RIPK1-202ENST00000380409 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
RIPK1-202ENST00000380409 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
RIPK1-202ENST00000380409 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
RIPK1-202ENST00000380409 HERC2O95714 4834 aa3.47□□□□□ -1.85
RIPK1-202ENST00000380409 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.85
RIPK1-202ENST00000380409 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.85
RIPK1-202ENST00000380409 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
RIPK1-202ENST00000380409 Q5VSD8 79 aa3.46□□□□□ -1.86
RIPK1-202ENST00000380409 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
RIPK1-202ENST00000380409 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
RIPK1-202ENST00000380409 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
RIPK1-202ENST00000380409 KRTAP10-6P60371 365 aaPredicted RBP3.44□□□□□ -1.86
RIPK1-202ENST00000380409 XP32Q5T750 250 aa3.44□□□□□ -1.86
RIPK1-202ENST00000380409 APOBP04114 4563 aaKnown RBP3.43□□□□□ -1.86
RIPK1-202ENST00000380409 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
RIPK1-202ENST00000380409 HERC1Q15751 4861 aa3.42□□□□□ -1.86
RIPK1-202ENST00000380409 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
RIPK1-202ENST00000380409 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
RIPK1-202ENST00000380409 FAT2Q9NYQ8 4349 aa3.4□□□□□ -1.87
RIPK1-202ENST00000380409 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
RIPK1-202ENST00000380409 S4R3F8 94 aa3.4□□□□□ -1.87
RIPK1-202ENST00000380409 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
RIPK1-202ENST00000380409 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
RIPK1-202ENST00000380409 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
RIPK1-202ENST00000380409 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
RIPK1-202ENST00000380409 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
RIPK1-202ENST00000380409 HSPG2P98160 4391 aa3.35□□□□□ -1.87
RIPK1-202ENST00000380409 PKD1P98161 4303 aa3.35□□□□□ -1.87
RIPK1-202ENST00000380409 R4GN34 69 aa3.35□□□□□ -1.87
RIPK1-202ENST00000380409 M0QZ58 72 aa3.32□□□□□ -1.88
RIPK1-202ENST00000380409 M0R2T5 61 aa3.32□□□□□ -1.88
RIPK1-202ENST00000380409 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
RIPK1-202ENST00000380409 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
RIPK1-202ENST00000380409 TNXBP22105 4242 aa3.3□□□□□ -1.88
RIPK1-202ENST00000380409 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
RIPK1-202ENST00000380409 LRP2P98164 4655 aa3.28□□□□□ -1.89
RIPK1-202ENST00000380409 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
RIPK1-202ENST00000380409 RPS29P62273 56 aaKnown RBP3.24□□□□□ -1.89
RIPK1-202ENST00000380409 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
RIPK1-202ENST00000380409 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
RIPK1-202ENST00000380409 MUC2Q02817 5179 aa3.2□□□□□ -1.9
RIPK1-202ENST00000380409 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
RIPK1-202ENST00000380409 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
RIPK1-202ENST00000380409 KRTAP10-4P60372 401 aaPredicted RBP3.16□□□□□ -1.9
RIPK1-202ENST00000380409 LPAP08519 4548 aa3.16□□□□□ -1.9
RIPK1-202ENST00000380409 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
RIPK1-202ENST00000380409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
RIPK1-202ENST00000380409 MT1HL1P0DM35 61 aa3.13□□□□□ -1.91
RIPK1-202ENST00000380409 KRTAP9-2Q9BYQ4 174 aa3.12□□□□□ -1.91
RIPK1-202ENST00000380409 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.92
RIPK1-202ENST00000380409 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
RIPK1-202ENST00000380409 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
RIPK1-202ENST00000380409 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
RIPK1-202ENST00000380409 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
RIPK1-202ENST00000380409 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
RIPK1-202ENST00000380409 INE1O15225 51 aa3.02□□□□□ -1.93
RIPK1-202ENST00000380409 KRTAP19-1Q8IUB9 90 aa3.01□□□□□ -1.93
RIPK1-202ENST00000380409 TNP1P09430 55 aa2.99□□□□□ -1.93
RIPK1-202ENST00000380409 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
RIPK1-202ENST00000380409 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
RIPK1-202ENST00000380409 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
RIPK1-202ENST00000380409 LCE3BQ5TA77 95 aa2.91□□□□□ -1.94
RIPK1-202ENST00000380409 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.95
RIPK1-202ENST00000380409 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
RIPK1-202ENST00000380409 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
RIPK1-202ENST00000380409 KRTAP4-7Q9BYR0 210 aa2.8□□□□□ -1.96
RIPK1-202ENST00000380409 USH2AO75445 5202 aa2.79□□□□□ -1.96
RIPK1-202ENST00000380409 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
RIPK1-202ENST00000380409 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
RIPK1-202ENST00000380409 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
RIPK1-202ENST00000380409 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.97
RIPK1-202ENST00000380409 MT1HP80294 61 aa2.68□□□□□ -1.98
RIPK1-202ENST00000380409 KRTAP9-7A8MTY7 169 aa2.67□□□□□ -1.98
RIPK1-202ENST00000380409 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
RIPK1-202ENST00000380409 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
RIPK1-202ENST00000380409 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
RIPK1-202ENST00000380409 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
RIPK1-202ENST00000380409 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
RIPK1-202ENST00000380409 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
RIPK1-202ENST00000380409 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
RIPK1-202ENST00000380409 SSPOA2VEC9 5147 aa2.57□□□□□ -2
RIPK1-202ENST00000380409 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
RIPK1-202ENST00000380409 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
RIPK1-202ENST00000380409 MT1FP04733 61 aa2.54□□□□□ -2
RIPK1-202ENST00000380409 KRTAP12-3P60328 96 aa2.54□□□□□ -2
RIPK1-202ENST00000380409 KRTAP10-5P60370 271 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms