RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 SMR3BP02814 79 aaPredicted RBP3.5□□□□□ -1.85
NFX1-202ENST00000379521 Q5VSD8 79 aa3.5□□□□□ -1.85
NFX1-202ENST00000379521 COX6B2Q6YFQ2 88 aa3.5□□□□□ -1.85
NFX1-202ENST00000379521 LRP2P98164 4655 aa3.49□□□□□ -1.85
NFX1-202ENST00000379521 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
NFX1-202ENST00000379521 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
NFX1-202ENST00000379521 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
NFX1-202ENST00000379521 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
NFX1-202ENST00000379521 H0YAA0 97 aa3.44□□□□□ -1.86
NFX1-202ENST00000379521 H3BS24 57 aa3.44□□□□□ -1.86
NFX1-202ENST00000379521 HERC1Q15751 4861 aa3.41□□□□□ -1.86
NFX1-202ENST00000379521 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.86
NFX1-202ENST00000379521 KRTAP4-5Q9BYR2 181 aa3.4□□□□□ -1.86
NFX1-202ENST00000379521 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
NFX1-202ENST00000379521 A0A1B0GU69 56 aa3.39□□□□□ -1.87
NFX1-202ENST00000379521 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
NFX1-202ENST00000379521 HMCN2Q8NDA2 5059 aa3.38□□□□□ -1.87
NFX1-202ENST00000379521 UQCR11O14957 56 aa3.38□□□□□ -1.87
NFX1-202ENST00000379521 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
NFX1-202ENST00000379521 A6NED7 52 aa3.37□□□□□ -1.87
NFX1-202ENST00000379521 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
NFX1-202ENST00000379521 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
NFX1-202ENST00000379521 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
NFX1-202ENST00000379521 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
NFX1-202ENST00000379521 A0A1B0GU33 70 aa3.29□□□□□ -1.88
NFX1-202ENST00000379521 S4R3F8 94 aa3.27□□□□□ -1.89
NFX1-202ENST00000379521 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
NFX1-202ENST00000379521 P0C880 135 aa3.24□□□□□ -1.89
NFX1-202ENST00000379521 KRTAP12-1P59990 96 aa3.21□□□□□ -1.89
NFX1-202ENST00000379521 M0QZ58 72 aa3.2□□□□□ -1.9
NFX1-202ENST00000379521 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
NFX1-202ENST00000379521 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
NFX1-202ENST00000379521 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
NFX1-202ENST00000379521 SEC61BP60468 96 aaKnown RBP3.18□□□□□ -1.9
NFX1-202ENST00000379521 MUC2Q02817 5179 aa3.15□□□□□ -1.91
NFX1-202ENST00000379521 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
NFX1-202ENST00000379521 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
NFX1-202ENST00000379521 CSAG1Q6PB30 78 aa3.13□□□□□ -1.91
NFX1-202ENST00000379521 ROMO1P60602 79 aa3.11□□□□□ -1.91
NFX1-202ENST00000379521 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
NFX1-202ENST00000379521 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
NFX1-202ENST00000379521 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
NFX1-202ENST00000379521 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
NFX1-202ENST00000379521 LCE2DQ5TA82 110 aaPredicted RBP3.1□□□□□ -1.91
NFX1-202ENST00000379521 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
NFX1-202ENST00000379521 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
NFX1-202ENST00000379521 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
NFX1-202ENST00000379521 UBR4Q5T4S7 5183 aa3.06□□□□□ -1.92
NFX1-202ENST00000379521 KRTAP19-1Q8IUB9 90 aa3.05□□□□□ -1.92
NFX1-202ENST00000379521 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
NFX1-202ENST00000379521 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
NFX1-202ENST00000379521 MT1HP80294 61 aa3.04□□□□□ -1.92
NFX1-202ENST00000379521 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
NFX1-202ENST00000379521 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
NFX1-202ENST00000379521 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
NFX1-202ENST00000379521 J3QL48 77 aa2.97□□□□□ -1.93
NFX1-202ENST00000379521 K7ERS5 55 aa2.96□□□□□ -1.94
NFX1-202ENST00000379521 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
NFX1-202ENST00000379521 MT2AP02795 61 aa2.95□□□□□ -1.94
NFX1-202ENST00000379521 MT1FP04733 61 aa2.94□□□□□ -1.94
NFX1-202ENST00000379521 KRTAP9-3Q9BYQ3 159 aa2.93□□□□□ -1.94
NFX1-202ENST00000379521 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
NFX1-202ENST00000379521 LCE2AQ5TA79 106 aaPredicted RBP2.91□□□□□ -1.94
NFX1-202ENST00000379521 A0A0D9SG42 100 aa2.91□□□□□ -1.94
NFX1-202ENST00000379521 MT1BP07438 61 aa2.9□□□□□ -1.94
NFX1-202ENST00000379521 R4GN34 69 aa2.9□□□□□ -1.94
NFX1-202ENST00000379521 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
NFX1-202ENST00000379521 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
NFX1-202ENST00000379521 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
NFX1-202ENST00000379521 MT1XP80297 61 aa2.85□□□□□ -1.95
NFX1-202ENST00000379521 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
NFX1-202ENST00000379521 KRTAP8-1Q8IUC2 63 aa2.8□□□□□ -1.96
NFX1-202ENST00000379521 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
NFX1-202ENST00000379521 LCE2BO14633 110 aa2.75□□□□□ -1.97
NFX1-202ENST00000379521 TNP1P09430 55 aa2.71□□□□□ -1.98
NFX1-202ENST00000379521 KRTAP9-2Q9BYQ4 174 aa2.7□□□□□ -1.98
NFX1-202ENST00000379521 USH2AO75445 5202 aa2.7□□□□□ -1.98
NFX1-202ENST00000379521 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
NFX1-202ENST00000379521 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
NFX1-202ENST00000379521 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
NFX1-202ENST00000379521 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
NFX1-202ENST00000379521 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
NFX1-202ENST00000379521 KRTAP9-6A0A140TA67 174 aa2.65□□□□□ -1.99
NFX1-202ENST00000379521 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
NFX1-202ENST00000379521 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
NFX1-202ENST00000379521 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
NFX1-202ENST00000379521 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
NFX1-202ENST00000379521 KRTAP12-3P60328 96 aa2.54□□□□□ -2
NFX1-202ENST00000379521 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
NFX1-202ENST00000379521 M0R2T5 61 aa2.52□□□□□ -2.01
NFX1-202ENST00000379521 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
NFX1-202ENST00000379521 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
NFX1-202ENST00000379521 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
NFX1-202ENST00000379521 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
NFX1-202ENST00000379521 MT1EP04732 61 aa2.47□□□□□ -2.01
NFX1-202ENST00000379521 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
NFX1-202ENST00000379521 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
NFX1-202ENST00000379521 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
NFX1-202ENST00000379521 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
NFX1-202ENST00000379521 MT1LQ93083 61 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms