RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 NDUFC1O43677 76 aa11.76□□□□□ -0.53
TM6SF1-204ENST00000379390 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
TM6SF1-204ENST00000379390 ACYP2P14621 99 aa11.68□□□□□ -0.54
TM6SF1-204ENST00000379390 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
TM6SF1-204ENST00000379390 KRTAP9-8Q9BYQ0 159 aa11.63□□□□□ -0.55
TM6SF1-204ENST00000379390 MT2AP02795 61 aa11.55□□□□□ -0.56
TM6SF1-204ENST00000379390 CHKB-CPT1BH3BT56 60 aa11.5□□□□□ -0.57
TM6SF1-204ENST00000379390 MT1FP04733 61 aa11.48□□□□□ -0.57
TM6SF1-204ENST00000379390 COA5Q86WW8 74 aa11.46□□□□□ -0.58
TM6SF1-204ENST00000379390 KRTAP10-10P60014 251 aa11.44□□□□□ -0.58
TM6SF1-204ENST00000379390 PCP4P48539 62 aa11.42□□□□□ -0.58
TM6SF1-204ENST00000379390 TMEM258P61165 79 aa11.38□□□□□ -0.59
TM6SF1-204ENST00000379390 ATP5EP56381 51 aaPredicted RBP11.38□□□□□ -0.59
TM6SF1-204ENST00000379390 SPTSSBQ8NFR3 76 aa11.37□□□□□ -0.59
TM6SF1-204ENST00000379390 H0YAA0 97 aa11.29□□□□□ -0.6
TM6SF1-204ENST00000379390 ADM2Q7Z4H4 148 aa11.27□□□□□ -0.61
TM6SF1-204ENST00000379390 KRTAP9-3Q9BYQ3 159 aa11.23□□□□□ -0.61
TM6SF1-204ENST00000379390 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
TM6SF1-204ENST00000379390 KRTAP9-2Q9BYQ4 174 aa11.17□□□□□ -0.62
TM6SF1-204ENST00000379390 P0C880 135 aa11.14□□□□□ -0.63
TM6SF1-204ENST00000379390 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
TM6SF1-204ENST00000379390 LCE2BO14633 110 aa11.05□□□□□ -0.64
TM6SF1-204ENST00000379390 KRTAP19-1Q8IUB9 90 aa11.03□□□□□ -0.64
TM6SF1-204ENST00000379390 SERP1Q9Y6X1 66 aa11.03□□□□□ -0.64
TM6SF1-204ENST00000379390 CRIPTQ9P021 101 aa11.02□□□□□ -0.65
TM6SF1-204ENST00000379390 SPRR2GQ9BYE4 73 aa10.98□□□□□ -0.65
TM6SF1-204ENST00000379390 SEC61GP60059 68 aa10.92□□□□□ -0.66
TM6SF1-204ENST00000379390 R4GN34 69 aa10.91□□□□□ -0.66
TM6SF1-204ENST00000379390 M0QZ58 72 aa10.88□□□□□ -0.67
TM6SF1-204ENST00000379390 FSIP2Q5CZC0 6907 aa10.86□□□□□ -0.67
TM6SF1-204ENST00000379390 USH2AO75445 5202 aa10.84□□□□□ -0.67
TM6SF1-204ENST00000379390 A0A1B0GU69 56 aa10.84□□□□□ -0.67
TM6SF1-204ENST00000379390 KRTAP19-8Q3LI54 63 aa10.78□□□□□ -0.68
TM6SF1-204ENST00000379390 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.68
TM6SF1-204ENST00000379390 Q5VV11 94 aa10.73□□□□□ -0.69
TM6SF1-204ENST00000379390 MT1BP07438 61 aa10.73□□□□□ -0.69
TM6SF1-204ENST00000379390 KRTAP13-4Q3LI77 160 aa10.72□□□□□ -0.69
TM6SF1-204ENST00000379390 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
TM6SF1-204ENST00000379390 A0A1B0GU33 70 aa10.69□□□□□ -0.7
TM6SF1-204ENST00000379390 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
TM6SF1-204ENST00000379390 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
TM6SF1-204ENST00000379390 CRCT1Q9UGL9 99 aa10.66□□□□□ -0.7
TM6SF1-204ENST00000379390 SMIM26A0A096LP01 95 aa10.63□□□□□ -0.71
TM6SF1-204ENST00000379390 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
TM6SF1-204ENST00000379390 SSPOA2VEC9 5147 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 Q1T7F1 81 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 V9GYY9 64 aa10.58□□□□□ -0.72
TM6SF1-204ENST00000379390 KRTAP9-6A0A140TA67 174 aa10.52□□□□□ -0.73
TM6SF1-204ENST00000379390 PSPHP1O15172 72 aa10.51□□□□□ -0.73
TM6SF1-204ENST00000379390 KRTAP19-6Q3LI70 58 aa10.48□□□□□ -0.73
TM6SF1-204ENST00000379390 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
TM6SF1-204ENST00000379390 A0A0D9SG42 100 aa10.47□□□□□ -0.73
TM6SF1-204ENST00000379390 A6NN06 94 aa10.41□□□□□ -0.74
TM6SF1-204ENST00000379390 UQCR11O14957 56 aa10.37□□□□□ -0.75
TM6SF1-204ENST00000379390 A8MU10 97 aa10.36□□□□□ -0.75
TM6SF1-204ENST00000379390 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
TM6SF1-204ENST00000379390 KRTAP10-5P60370 271 aa10.29□□□□□ -0.76
TM6SF1-204ENST00000379390 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
TM6SF1-204ENST00000379390 SPINT4Q6UDR6 99 aa10.25□□□□□ -0.77
TM6SF1-204ENST00000379390 MT1XP80297 61 aa10.24□□□□□ -0.77
TM6SF1-204ENST00000379390 MIR22HGQ0VDD5 57 aa10.22□□□□□ -0.77
TM6SF1-204ENST00000379390 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
TM6SF1-204ENST00000379390 PRO2289Q9P1D8 64 aa10.18□□□□□ -0.78
TM6SF1-204ENST00000379390 A6NED7 52 aa10.17□□□□□ -0.78
TM6SF1-204ENST00000379390 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
TM6SF1-204ENST00000379390 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
TM6SF1-204ENST00000379390 MACF1Q9UPN3 7388 aaKnown RBP9.9□□□□□ -0.82
TM6SF1-204ENST00000379390 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
TM6SF1-204ENST00000379390 K7ERS5 55 aa9.85□□□□□ -0.83
TM6SF1-204ENST00000379390 KRTAP10-7P60409 375 aaPredicted RBP9.81□□□□□ -0.84
TM6SF1-204ENST00000379390 C10orf95Q9H7T3 257 aa9.74□□□□□ -0.85
TM6SF1-204ENST00000379390 KRTAP10-12P60413 245 aa9.69□□□□□ -0.86
TM6SF1-204ENST00000379390 SYNE2Q8WXH0 6885 aaKnown RBP9.64□□□□□ -0.87
TM6SF1-204ENST00000379390 KMT2DO14686 5537 aa9.63□□□□□ -0.87
TM6SF1-204ENST00000379390 BRK1Q8WUW1 75 aa9.6□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
TM6SF1-204ENST00000379390 KRTAP9-7A8MTY7 169 aa9.56□□□□□ -0.88
TM6SF1-204ENST00000379390 TNP1P09430 55 aa9.53□□□□□ -0.88
TM6SF1-204ENST00000379390 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
TM6SF1-204ENST00000379390 KRTAP6-3Q3LI67 103 aa9.45□□□□□ -0.9
TM6SF1-204ENST00000379390 ROMO1P60602 79 aa9.35□□□□□ -0.91
TM6SF1-204ENST00000379390 KRTAP5-9P26371 169 aa9.34□□□□□ -0.91
TM6SF1-204ENST00000379390 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
TM6SF1-204ENST00000379390 SPRR2FQ96RM1 72 aa9.3□□□□□ -0.92
TM6SF1-204ENST00000379390 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
TM6SF1-204ENST00000379390 KRTAP19-7Q3SYF9 63 aa9.13□□□□□ -0.95
TM6SF1-204ENST00000379390 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
TM6SF1-204ENST00000379390 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
TM6SF1-204ENST00000379390 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
TM6SF1-204ENST00000379390 PRO0628Q9UI54 55 aa9.02□□□□□ -0.97
TM6SF1-204ENST00000379390 MT1EP04732 61 aa9.01□□□□□ -0.97
TM6SF1-204ENST00000379390 MDN1Q9NU22 5596 aa9□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2EP22531 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2BP35325 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 SPRR2AP35326 72 aa8.98□□□□□ -0.97
TM6SF1-204ENST00000379390 KRTAP23-1A1A580 65 aa8.97□□□□□ -0.97
TM6SF1-204ENST00000379390 LCE1AQ5T7P2 110 aa8.94□□□□□ -0.98
TM6SF1-204ENST00000379390 NEBP20929 6669 aa8.91□□□□□ -0.98
TM6SF1-204ENST00000379390 KRTAP12-3P60328 96 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms