RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 A8MU10 97 aa7.58□□□□□ -1.2
RAB3IP-203ENST00000378809 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
RAB3IP-203ENST00000378809 SEC61GP60059 68 aa7.56□□□□□ -1.2
RAB3IP-203ENST00000378809 LCA10Q71F78 164 aa7.54□□□□□ -1.2
RAB3IP-203ENST00000378809 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.2
RAB3IP-203ENST00000378809 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
RAB3IP-203ENST00000378809 S4R3F8 94 aa7.47□□□□□ -1.21
RAB3IP-203ENST00000378809 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
RAB3IP-203ENST00000378809 UQCR11O14957 56 aa7.46□□□□□ -1.22
RAB3IP-203ENST00000378809 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
RAB3IP-203ENST00000378809 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
RAB3IP-203ENST00000378809 MIR22HGQ0VDD5 57 aa7.41□□□□□ -1.22
RAB3IP-203ENST00000378809 PCLOQ9Y6V0 5065 aa7.4□□□□□ -1.22
RAB3IP-203ENST00000378809 PMAIP1Q13794 54 aa7.37□□□□□ -1.23
RAB3IP-203ENST00000378809 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
RAB3IP-203ENST00000378809 A0A1B0GU33 70 aa7.35□□□□□ -1.23
RAB3IP-203ENST00000378809 HERC1Q15751 4861 aa7.32□□□□□ -1.24
RAB3IP-203ENST00000378809 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
RAB3IP-203ENST00000378809 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
RAB3IP-203ENST00000378809 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
RAB3IP-203ENST00000378809 H0YAA0 97 aa7.27□□□□□ -1.25
RAB3IP-203ENST00000378809 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
RAB3IP-203ENST00000378809 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
RAB3IP-203ENST00000378809 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
RAB3IP-203ENST00000378809 A6NN06 94 aa7.22□□□□□ -1.25
RAB3IP-203ENST00000378809 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.26
RAB3IP-203ENST00000378809 ADM2Q7Z4H4 148 aa7.2□□□□□ -1.26
RAB3IP-203ENST00000378809 MUC2Q02817 5179 aa7.2□□□□□ -1.26
RAB3IP-203ENST00000378809 P0C880 135 aa7.18□□□□□ -1.26
RAB3IP-203ENST00000378809 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
RAB3IP-203ENST00000378809 KTN1-AS1Q86SY8 53 aa7.1□□□□□ -1.27
RAB3IP-203ENST00000378809 A0A0D9SG42 100 aa7.08□□□□□ -1.28
RAB3IP-203ENST00000378809 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
RAB3IP-203ENST00000378809 K7ERS5 55 aa7.04□□□□□ -1.28
RAB3IP-203ENST00000378809 M0QZ58 72 aa6.96□□□□□ -1.29
RAB3IP-203ENST00000378809 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
RAB3IP-203ENST00000378809 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
RAB3IP-203ENST00000378809 R4GN34 69 aa6.93□□□□□ -1.3
RAB3IP-203ENST00000378809 PRAC1Q96KF2 57 aa6.9□□□□□ -1.3
RAB3IP-203ENST00000378809 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
RAB3IP-203ENST00000378809 LINC01554Q52M75 96 aa6.89□□□□□ -1.31
RAB3IP-203ENST00000378809 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
RAB3IP-203ENST00000378809 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
RAB3IP-203ENST00000378809 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
RAB3IP-203ENST00000378809 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
RAB3IP-203ENST00000378809 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
RAB3IP-203ENST00000378809 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
RAB3IP-203ENST00000378809 M0R2T5 61 aa6.79□□□□□ -1.32
RAB3IP-203ENST00000378809 ROMO1P60602 79 aa6.77□□□□□ -1.32
RAB3IP-203ENST00000378809 MT1HP80294 61 aa6.72□□□□□ -1.33
RAB3IP-203ENST00000378809 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
RAB3IP-203ENST00000378809 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
RAB3IP-203ENST00000378809 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
RAB3IP-203ENST00000378809 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
RAB3IP-203ENST00000378809 MT2AP02795 61 aa6.51□□□□□ -1.37
RAB3IP-203ENST00000378809 MT1FP04733 61 aa6.5□□□□□ -1.37
RAB3IP-203ENST00000378809 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
RAB3IP-203ENST00000378809 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
RAB3IP-203ENST00000378809 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
RAB3IP-203ENST00000378809 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
RAB3IP-203ENST00000378809 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
RAB3IP-203ENST00000378809 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
RAB3IP-203ENST00000378809 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
RAB3IP-203ENST00000378809 TNP1P09430 55 aa6.22□□□□□ -1.41
RAB3IP-203ENST00000378809 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
RAB3IP-203ENST00000378809 MT1BP07438 61 aa6.18□□□□□ -1.42
RAB3IP-203ENST00000378809 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
RAB3IP-203ENST00000378809 LCE2BO14633 110 aa6.1□□□□□ -1.43
RAB3IP-203ENST00000378809 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
RAB3IP-203ENST00000378809 MT1XP80297 61 aa6.04□□□□□ -1.44
RAB3IP-203ENST00000378809 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
RAB3IP-203ENST00000378809 USH2AO75445 5202 aa5.98□□□□□ -1.45
RAB3IP-203ENST00000378809 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
RAB3IP-203ENST00000378809 LCE3AQ5TA76 89 aa5.92□□□□□ -1.46
RAB3IP-203ENST00000378809 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
RAB3IP-203ENST00000378809 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
RAB3IP-203ENST00000378809 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
RAB3IP-203ENST00000378809 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
RAB3IP-203ENST00000378809 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
RAB3IP-203ENST00000378809 KMT2DO14686 5537 aa5.67□□□□□ -1.5
RAB3IP-203ENST00000378809 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
RAB3IP-203ENST00000378809 SSPOA2VEC9 5147 aa5.65□□□□□ -1.5
RAB3IP-203ENST00000378809 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
RAB3IP-203ENST00000378809 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
RAB3IP-203ENST00000378809 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
RAB3IP-203ENST00000378809 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
RAB3IP-203ENST00000378809 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
RAB3IP-203ENST00000378809 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
RAB3IP-203ENST00000378809 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
RAB3IP-203ENST00000378809 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
RAB3IP-203ENST00000378809 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
RAB3IP-203ENST00000378809 H3BS24 57 aa5.36□□□□□ -1.55
RAB3IP-203ENST00000378809 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
RAB3IP-203ENST00000378809 MT1EP04732 61 aa5.28□□□□□ -1.56
RAB3IP-203ENST00000378809 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
RAB3IP-203ENST00000378809 MT1LQ93083 61 aa5.21□□□□□ -1.58
RAB3IP-203ENST00000378809 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
RAB3IP-203ENST00000378809 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
RAB3IP-203ENST00000378809 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
RAB3IP-203ENST00000378809 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms