RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
RER1-204ENST00000378518 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
RER1-204ENST00000378518 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
RER1-204ENST00000378518 CRCT1Q9UGL9 99 aa9.31□□□□□ -0.92
RER1-204ENST00000378518 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
RER1-204ENST00000378518 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
RER1-204ENST00000378518 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
RER1-204ENST00000378518 LCE2BO14633 110 aa9.24□□□□□ -0.93
RER1-204ENST00000378518 ACYP2P14621 99 aa9.21□□□□□ -0.94
RER1-204ENST00000378518 COX7CP15954 63 aa9.17□□□□□ -0.94
RER1-204ENST00000378518 H0YAA0 97 aa9.16□□□□□ -0.94
RER1-204ENST00000378518 SPANXA2-OT1Q8N9U9 137 aa9.15□□□□□ -0.94
RER1-204ENST00000378518 USH2AO75445 5202 aa9.14□□□□□ -0.95
RER1-204ENST00000378518 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
RER1-204ENST00000378518 CHKB-CPT1BH3BT56 60 aa9.07□□□□□ -0.96
RER1-204ENST00000378518 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
RER1-204ENST00000378518 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
RER1-204ENST00000378518 ANAPC13Q9BS18 74 aa9.06□□□□□ -0.96
RER1-204ENST00000378518 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
RER1-204ENST00000378518 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
RER1-204ENST00000378518 SSPOA2VEC9 5147 aa8.97□□□□□ -0.97
RER1-204ENST00000378518 Q5VV11 94 aa8.93□□□□□ -0.98
RER1-204ENST00000378518 H7BZZ5 65 aa8.92□□□□□ -0.98
RER1-204ENST00000378518 KRTAP19-8Q3LI54 63 aa8.9□□□□□ -0.98
RER1-204ENST00000378518 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
RER1-204ENST00000378518 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
RER1-204ENST00000378518 P0C880 135 aa8.87□□□□□ -0.99
RER1-204ENST00000378518 COA5Q86WW8 74 aa8.86□□□□□ -0.99
RER1-204ENST00000378518 R4GN34 69 aa8.85□□□□□ -0.99
RER1-204ENST00000378518 MT1BP07438 61 aa8.83□□□□□ -1
RER1-204ENST00000378518 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
RER1-204ENST00000378518 CCDC179H3BU77 68 aa8.82□□□□□ -1
RER1-204ENST00000378518 M0QZ58 72 aa8.78□□□□□ -1
RER1-204ENST00000378518 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
RER1-204ENST00000378518 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
RER1-204ENST00000378518 A6NN06 94 aa8.66□□□□□ -1.02
RER1-204ENST00000378518 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.64□□□□□ -1.03
RER1-204ENST00000378518 SEC61GP60059 68 aa8.64□□□□□ -1.03
RER1-204ENST00000378518 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
RER1-204ENST00000378518 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
RER1-204ENST00000378518 SERP1Q9Y6X1 66 aa8.6□□□□□ -1.03
RER1-204ENST00000378518 KRTAP10-5P60370 271 aa8.58□□□□□ -1.04
RER1-204ENST00000378518 TMEM258P61165 79 aa8.56□□□□□ -1.04
RER1-204ENST00000378518 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
RER1-204ENST00000378518 A0A1B0GU69 56 aa8.44□□□□□ -1.06
RER1-204ENST00000378518 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
RER1-204ENST00000378518 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
RER1-204ENST00000378518 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
RER1-204ENST00000378518 A0A1B0GU33 70 aa8.4□□□□□ -1.06
RER1-204ENST00000378518 MT1XP80297 61 aa8.38□□□□□ -1.07
RER1-204ENST00000378518 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
RER1-204ENST00000378518 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
RER1-204ENST00000378518 SYNE2Q8WXH0 6885 aaKnown RBP8.28□□□□□ -1.08
RER1-204ENST00000378518 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.09
RER1-204ENST00000378518 A0A0D9SG42 100 aa8.26□□□□□ -1.09
RER1-204ENST00000378518 KRTAP6-3Q3LI67 103 aa8.21□□□□□ -1.1
RER1-204ENST00000378518 CAMK2N1Q7Z7J9 78 aa8.2□□□□□ -1.1
RER1-204ENST00000378518 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
RER1-204ENST00000378518 PCP4P48539 62 aa8.15□□□□□ -1.1
RER1-204ENST00000378518 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
RER1-204ENST00000378518 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
RER1-204ENST00000378518 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
RER1-204ENST00000378518 V9GYY9 64 aa8.07□□□□□ -1.12
RER1-204ENST00000378518 A8MU10 97 aa8.06□□□□□ -1.12
RER1-204ENST00000378518 UQCR11O14957 56 aa8.03□□□□□ -1.12
RER1-204ENST00000378518 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
RER1-204ENST00000378518 KRTAP5-9P26371 169 aa7.98□□□□□ -1.13
RER1-204ENST00000378518 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
RER1-204ENST00000378518 Q1T7F1 81 aa7.97□□□□□ -1.13
RER1-204ENST00000378518 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
RER1-204ENST00000378518 KMT2DO14686 5537 aa7.92□□□□□ -1.14
RER1-204ENST00000378518 PSPHP1O15172 72 aa7.91□□□□□ -1.14
RER1-204ENST00000378518 KRTAP4-8A0A0G2JLE6 195 aa7.88□□□□□ -1.15
RER1-204ENST00000378518 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
RER1-204ENST00000378518 KRTAP4-8Q9BYQ9 185 aa7.88□□□□□ -1.15
RER1-204ENST00000378518 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
RER1-204ENST00000378518 SPRR2FQ96RM1 72 aa7.86□□□□□ -1.15
RER1-204ENST00000378518 MUC12Q9UKN1 5478 aa7.78□□□□□ -1.16
RER1-204ENST00000378518 NEBP20929 6669 aa7.73□□□□□ -1.17
RER1-204ENST00000378518 K7ERS5 55 aa7.71□□□□□ -1.18
RER1-204ENST00000378518 A6NED7 52 aa7.7□□□□□ -1.18
RER1-204ENST00000378518 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
RER1-204ENST00000378518 TNP1P09430 55 aa7.66□□□□□ -1.18
RER1-204ENST00000378518 SPRR2EP22531 72 aa7.66□□□□□ -1.18
RER1-204ENST00000378518 SPRR2BP35325 72 aa7.66□□□□□ -1.18
RER1-204ENST00000378518 SPRR2AP35326 72 aa7.66□□□□□ -1.18
RER1-204ENST00000378518 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
RER1-204ENST00000378518 LCE1AQ5T7P2 110 aa7.56□□□□□ -1.2
RER1-204ENST00000378518 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
RER1-204ENST00000378518 KRTAP20-1Q3LI63 56 aa7.45□□□□□ -1.22
RER1-204ENST00000378518 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
RER1-204ENST00000378518 MT1EP04732 61 aa7.41□□□□□ -1.22
RER1-204ENST00000378518 SPRR2DP22532 72 aa7.41□□□□□ -1.22
RER1-204ENST00000378518 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
RER1-204ENST00000378518 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
RER1-204ENST00000378518 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
RER1-204ENST00000378518 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
RER1-204ENST00000378518 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
RER1-204ENST00000378518 KRTAP19-3Q7Z4W3 81 aa7.29□□□□□ -1.24
RER1-204ENST00000378518 LCE5AQ5TCM9 118 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms