RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 S4R3F8 94 aa10.33□□□□□ -0.76
CBWD3-202ENST00000377342 LCA10Q71F78 164 aa10.31□□□□□ -0.76
CBWD3-202ENST00000377342 KRTAP10-6P60371 365 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-202ENST00000377342 LORP23490 312 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-202ENST00000377342 ACYP2P14621 99 aa10.19□□□□□ -0.78
CBWD3-202ENST00000377342 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
CBWD3-202ENST00000377342 KRTAP9-8Q9BYQ0 159 aa10.12□□□□□ -0.79
CBWD3-202ENST00000377342 PCP4P48539 62 aa10.11□□□□□ -0.79
CBWD3-202ENST00000377342 MT2AP02795 61 aa10.06□□□□□ -0.8
CBWD3-202ENST00000377342 TMEM258P61165 79 aa10.04□□□□□ -0.8
CBWD3-202ENST00000377342 COA5Q86WW8 74 aa10.03□□□□□ -0.8
CBWD3-202ENST00000377342 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
CBWD3-202ENST00000377342 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
CBWD3-202ENST00000377342 MT1FP04733 61 aa9.99□□□□□ -0.81
CBWD3-202ENST00000377342 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.83
CBWD3-202ENST00000377342 H0YAA0 97 aa9.88□□□□□ -0.83
CBWD3-202ENST00000377342 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
CBWD3-202ENST00000377342 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
CBWD3-202ENST00000377342 KRTAP9-3Q9BYQ3 159 aa9.77□□□□□ -0.84
CBWD3-202ENST00000377342 P0C880 135 aa9.72□□□□□ -0.85
CBWD3-202ENST00000377342 SERP1Q9Y6X1 66 aa9.71□□□□□ -0.85
CBWD3-202ENST00000377342 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
CBWD3-202ENST00000377342 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
CBWD3-202ENST00000377342 LCE2BO14633 110 aa9.6□□□□□ -0.87
CBWD3-202ENST00000377342 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
CBWD3-202ENST00000377342 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
CBWD3-202ENST00000377342 SEC61GP60059 68 aa9.49□□□□□ -0.89
CBWD3-202ENST00000377342 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
CBWD3-202ENST00000377342 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
CBWD3-202ENST00000377342 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
CBWD3-202ENST00000377342 USH2AO75445 5202 aa9.47□□□□□ -0.89
CBWD3-202ENST00000377342 R4GN34 69 aa9.47□□□□□ -0.89
CBWD3-202ENST00000377342 A0A1B0GU69 56 aa9.46□□□□□ -0.89
CBWD3-202ENST00000377342 M0QZ58 72 aa9.45□□□□□ -0.9
CBWD3-202ENST00000377342 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
CBWD3-202ENST00000377342 KRTAP19-8Q3LI54 63 aa9.42□□□□□ -0.9
CBWD3-202ENST00000377342 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
CBWD3-202ENST00000377342 FSIP2Q5CZC0 6907 aa9.37□□□□□ -0.91
CBWD3-202ENST00000377342 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
CBWD3-202ENST00000377342 MT1BP07438 61 aa9.36□□□□□ -0.91
CBWD3-202ENST00000377342 A0A1B0GU33 70 aa9.33□□□□□ -0.92
CBWD3-202ENST00000377342 Q1T7F1 81 aa9.33□□□□□ -0.92
CBWD3-202ENST00000377342 PRR15LQ9BU68 103 aa9.33□□□□□ -0.92
CBWD3-202ENST00000377342 Q5VV11 94 aa9.3□□□□□ -0.92
CBWD3-202ENST00000377342 V9GYY9 64 aa9.29□□□□□ -0.92
CBWD3-202ENST00000377342 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
CBWD3-202ENST00000377342 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
CBWD3-202ENST00000377342 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
CBWD3-202ENST00000377342 PSPHP1O15172 72 aa9.2□□□□□ -0.94
CBWD3-202ENST00000377342 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
CBWD3-202ENST00000377342 A6NN06 94 aa9.11□□□□□ -0.95
CBWD3-202ENST00000377342 KRTAP19-6Q3LI70 58 aa9.11□□□□□ -0.95
CBWD3-202ENST00000377342 A0A0D9SG42 100 aa9.1□□□□□ -0.95
CBWD3-202ENST00000377342 UQCR11O14957 56 aa9.07□□□□□ -0.96
CBWD3-202ENST00000377342 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
CBWD3-202ENST00000377342 A8MU10 97 aa9.07□□□□□ -0.96
CBWD3-202ENST00000377342 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
CBWD3-202ENST00000377342 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
CBWD3-202ENST00000377342 KRTAP10-5P60370 271 aa8.96□□□□□ -0.98
CBWD3-202ENST00000377342 MIR22HGQ0VDD5 57 aa8.95□□□□□ -0.98
CBWD3-202ENST00000377342 FCGBPQ9Y6R7 5405 aaPredicted RBP8.94□□□□□ -0.98
CBWD3-202ENST00000377342 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
CBWD3-202ENST00000377342 MT1XP80297 61 aa8.94□□□□□ -0.98
CBWD3-202ENST00000377342 A6NED7 52 aa8.9□□□□□ -0.98
CBWD3-202ENST00000377342 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
CBWD3-202ENST00000377342 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
CBWD3-202ENST00000377342 CAMK2N1Q7Z7J9 78 aa8.8□□□□□ -1
CBWD3-202ENST00000377342 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
CBWD3-202ENST00000377342 MACF1Q9UPN3 7388 aaKnown RBP8.61□□□□□ -1.03
CBWD3-202ENST00000377342 K7ERS5 55 aa8.56□□□□□ -1.04
CBWD3-202ENST00000377342 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
CBWD3-202ENST00000377342 KRTAP10-7P60409 375 aaPredicted RBP8.55□□□□□ -1.04
CBWD3-202ENST00000377342 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
CBWD3-202ENST00000377342 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
CBWD3-202ENST00000377342 KRTAP10-12P60413 245 aa8.46□□□□□ -1.05
CBWD3-202ENST00000377342 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
CBWD3-202ENST00000377342 KMT2DO14686 5537 aa8.39□□□□□ -1.07
CBWD3-202ENST00000377342 SYNE2Q8WXH0 6885 aaKnown RBP8.37□□□□□ -1.07
CBWD3-202ENST00000377342 KRTAP4-8A0A0G2JLE6 195 aa8.34□□□□□ -1.08
CBWD3-202ENST00000377342 TNP1P09430 55 aa8.29□□□□□ -1.08
CBWD3-202ENST00000377342 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.09
CBWD3-202ENST00000377342 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
CBWD3-202ENST00000377342 ROMO1P60602 79 aa8.19□□□□□ -1.1
CBWD3-202ENST00000377342 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
CBWD3-202ENST00000377342 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
CBWD3-202ENST00000377342 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
CBWD3-202ENST00000377342 LCE3AQ5TA76 89 aa8.11□□□□□ -1.11
CBWD3-202ENST00000377342 LCE3BQ5TA77 95 aa8.07□□□□□ -1.12
CBWD3-202ENST00000377342 SPRR2FQ96RM1 72 aa8.02□□□□□ -1.13
CBWD3-202ENST00000377342 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
CBWD3-202ENST00000377342 KRTAP19-7Q3SYF9 63 aa7.98□□□□□ -1.13
CBWD3-202ENST00000377342 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
CBWD3-202ENST00000377342 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
CBWD3-202ENST00000377342 MUC12Q9UKN1 5478 aa7.92□□□□□ -1.14
CBWD3-202ENST00000377342 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CBWD3-202ENST00000377342 KRTAP9-9Q9BYP9 154 aa7.88□□□□□ -1.15
CBWD3-202ENST00000377342 KRTAP9-4Q9BYQ2 154 aa7.88□□□□□ -1.15
CBWD3-202ENST00000377342 MT1EP04732 61 aa7.86□□□□□ -1.15
CBWD3-202ENST00000377342 KRTAP4-12Q9BQ66 201 aa7.83□□□□□ -1.16
CBWD3-202ENST00000377342 MDN1Q9NU22 5596 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 370.6 ms