RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
TIMP1-202ENST00000377017 H7BZZ5 65 aa6.31□□□□□ -1.4
TIMP1-202ENST00000377017 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
TIMP1-202ENST00000377017 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
TIMP1-202ENST00000377017 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
TIMP1-202ENST00000377017 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
TIMP1-202ENST00000377017 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
TIMP1-202ENST00000377017 MT2AP02795 61 aa6.21□□□□□ -1.42
TIMP1-202ENST00000377017 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
TIMP1-202ENST00000377017 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
TIMP1-202ENST00000377017 COA5Q86WW8 74 aa6.17□□□□□ -1.42
TIMP1-202ENST00000377017 MT1FP04733 61 aa6.16□□□□□ -1.42
TIMP1-202ENST00000377017 TMEM258P61165 79 aa6.16□□□□□ -1.42
TIMP1-202ENST00000377017 H0YAA0 97 aa6.15□□□□□ -1.42
TIMP1-202ENST00000377017 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
TIMP1-202ENST00000377017 PCP4P48539 62 aa6.1□□□□□ -1.43
TIMP1-202ENST00000377017 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
TIMP1-202ENST00000377017 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
TIMP1-202ENST00000377017 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
TIMP1-202ENST00000377017 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
TIMP1-202ENST00000377017 SEC61GP60059 68 aa5.98□□□□□ -1.45
TIMP1-202ENST00000377017 P0C880 135 aa5.97□□□□□ -1.45
TIMP1-202ENST00000377017 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
TIMP1-202ENST00000377017 SERP1Q9Y6X1 66 aa5.96□□□□□ -1.46
TIMP1-202ENST00000377017 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
TIMP1-202ENST00000377017 R4GN34 69 aa5.93□□□□□ -1.46
TIMP1-202ENST00000377017 LCE2BO14633 110 aa5.92□□□□□ -1.46
TIMP1-202ENST00000377017 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
TIMP1-202ENST00000377017 M0QZ58 72 aa5.89□□□□□ -1.47
TIMP1-202ENST00000377017 A0A1B0GU69 56 aa5.88□□□□□ -1.47
TIMP1-202ENST00000377017 USH2AO75445 5202 aa5.86□□□□□ -1.47
TIMP1-202ENST00000377017 Q5VV11 94 aa5.84□□□□□ -1.47
TIMP1-202ENST00000377017 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
TIMP1-202ENST00000377017 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
TIMP1-202ENST00000377017 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
TIMP1-202ENST00000377017 A0A1B0GU33 70 aa5.79□□□□□ -1.48
TIMP1-202ENST00000377017 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
TIMP1-202ENST00000377017 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
TIMP1-202ENST00000377017 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
TIMP1-202ENST00000377017 V9GYY9 64 aa5.78□□□□□ -1.48
TIMP1-202ENST00000377017 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
TIMP1-202ENST00000377017 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
TIMP1-202ENST00000377017 MT1BP07438 61 aa5.75□□□□□ -1.49
TIMP1-202ENST00000377017 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
TIMP1-202ENST00000377017 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
TIMP1-202ENST00000377017 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
TIMP1-202ENST00000377017 Q1T7F1 81 aa5.71□□□□□ -1.5
TIMP1-202ENST00000377017 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
TIMP1-202ENST00000377017 A6NN06 94 aa5.68□□□□□ -1.5
TIMP1-202ENST00000377017 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
TIMP1-202ENST00000377017 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
TIMP1-202ENST00000377017 UQCR11O14957 56 aa5.64□□□□□ -1.51
TIMP1-202ENST00000377017 A0A0D9SG42 100 aa5.63□□□□□ -1.51
TIMP1-202ENST00000377017 PSPHP1O15172 72 aa5.63□□□□□ -1.51
TIMP1-202ENST00000377017 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
TIMP1-202ENST00000377017 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
TIMP1-202ENST00000377017 A8MU10 97 aa5.54□□□□□ -1.52
TIMP1-202ENST00000377017 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
TIMP1-202ENST00000377017 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
TIMP1-202ENST00000377017 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
TIMP1-202ENST00000377017 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
TIMP1-202ENST00000377017 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
TIMP1-202ENST00000377017 A6NED7 52 aa5.49□□□□□ -1.53
TIMP1-202ENST00000377017 MT1XP80297 61 aa5.49□□□□□ -1.53
TIMP1-202ENST00000377017 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
TIMP1-202ENST00000377017 K7ERS5 55 aa5.41□□□□□ -1.54
TIMP1-202ENST00000377017 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
TIMP1-202ENST00000377017 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
TIMP1-202ENST00000377017 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
TIMP1-202ENST00000377017 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
TIMP1-202ENST00000377017 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
TIMP1-202ENST00000377017 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
TIMP1-202ENST00000377017 TNP1P09430 55 aa5.2□□□□□ -1.58
TIMP1-202ENST00000377017 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
TIMP1-202ENST00000377017 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
TIMP1-202ENST00000377017 BRK1Q8WUW1 75 aa5.16□□□□□ -1.58
TIMP1-202ENST00000377017 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
TIMP1-202ENST00000377017 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
TIMP1-202ENST00000377017 KMT2DO14686 5537 aa5.12□□□□□ -1.59
TIMP1-202ENST00000377017 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
TIMP1-202ENST00000377017 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
TIMP1-202ENST00000377017 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
TIMP1-202ENST00000377017 ROMO1P60602 79 aa5.07□□□□□ -1.6
TIMP1-202ENST00000377017 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
TIMP1-202ENST00000377017 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
TIMP1-202ENST00000377017 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
TIMP1-202ENST00000377017 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
TIMP1-202ENST00000377017 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
TIMP1-202ENST00000377017 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
TIMP1-202ENST00000377017 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
TIMP1-202ENST00000377017 SPRR2EP22531 72 aa4.87□□□□□ -1.63
TIMP1-202ENST00000377017 SPRR2BP35325 72 aa4.87□□□□□ -1.63
TIMP1-202ENST00000377017 SPRR2AP35326 72 aa4.87□□□□□ -1.63
TIMP1-202ENST00000377017 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
TIMP1-202ENST00000377017 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
TIMP1-202ENST00000377017 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
TIMP1-202ENST00000377017 MT1EP04732 61 aa4.85□□□□□ -1.63
TIMP1-202ENST00000377017 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
TIMP1-202ENST00000377017 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
TIMP1-202ENST00000377017 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms