RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 SVIPQ8NHG7 77 aa8.37□□□□□ -1.07
HLA-F-218ENST00000376861 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
HLA-F-218ENST00000376861 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
HLA-F-218ENST00000376861 S4R3F8 94 aa8.28□□□□□ -1.08
HLA-F-218ENST00000376861 COA5Q86WW8 74 aa8.27□□□□□ -1.09
HLA-F-218ENST00000376861 FLGP20930 4061 aaPredicted RBP8.27□□□□□ -1.09
HLA-F-218ENST00000376861 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
HLA-F-218ENST00000376861 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
HLA-F-218ENST00000376861 LORP23490 312 aaPredicted RBP8.24□□□□□ -1.09
HLA-F-218ENST00000376861 LCA10Q71F78 164 aa8.22□□□□□ -1.09
HLA-F-218ENST00000376861 SERP1Q9Y6X1 66 aa8.22□□□□□ -1.09
HLA-F-218ENST00000376861 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
HLA-F-218ENST00000376861 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
HLA-F-218ENST00000376861 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
HLA-F-218ENST00000376861 KRTAP9-6A0A140TA67 174 aa8.1□□□□□ -1.11
HLA-F-218ENST00000376861 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
HLA-F-218ENST00000376861 KRTAP10-10P60014 251 aa8.06□□□□□ -1.12
HLA-F-218ENST00000376861 MT2AP02795 61 aa8.03□□□□□ -1.12
HLA-F-218ENST00000376861 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
HLA-F-218ENST00000376861 SMIM26A0A096LP01 95 aa7.98□□□□□ -1.13
HLA-F-218ENST00000376861 MT1FP04733 61 aa7.97□□□□□ -1.13
HLA-F-218ENST00000376861 H0YAA0 97 aa7.93□□□□□ -1.14
HLA-F-218ENST00000376861 SEC61GP60059 68 aa7.89□□□□□ -1.15
HLA-F-218ENST00000376861 V9GYY9 64 aa7.89□□□□□ -1.15
HLA-F-218ENST00000376861 LINC01558Q9Y6Z2 57 aa7.88□□□□□ -1.15
HLA-F-218ENST00000376861 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
HLA-F-218ENST00000376861 Q1T7F1 81 aa7.86□□□□□ -1.15
HLA-F-218ENST00000376861 A0A1B0GU69 56 aa7.85□□□□□ -1.15
HLA-F-218ENST00000376861 PRR15LQ9BU68 103 aa7.83□□□□□ -1.16
HLA-F-218ENST00000376861 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
HLA-F-218ENST00000376861 FSIP2Q5CZC0 6907 aa7.81□□□□□ -1.16
HLA-F-218ENST00000376861 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
HLA-F-218ENST00000376861 P0C880 135 aa7.77□□□□□ -1.17
HLA-F-218ENST00000376861 PRO0628Q9UI54 55 aa7.73□□□□□ -1.17
HLA-F-218ENST00000376861 CRIPTQ9P021 101 aa7.73□□□□□ -1.17
HLA-F-218ENST00000376861 CRCT1Q9UGL9 99 aa7.72□□□□□ -1.17
HLA-F-218ENST00000376861 PSPHP1O15172 72 aa7.71□□□□□ -1.18
HLA-F-218ENST00000376861 LCE2BO14633 110 aa7.68□□□□□ -1.18
HLA-F-218ENST00000376861 A0A1B0GU33 70 aa7.67□□□□□ -1.18
HLA-F-218ENST00000376861 Q5VV11 94 aa7.64□□□□□ -1.19
HLA-F-218ENST00000376861 R4GN34 69 aa7.62□□□□□ -1.19
HLA-F-218ENST00000376861 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
HLA-F-218ENST00000376861 M0QZ58 72 aa7.61□□□□□ -1.19
HLA-F-218ENST00000376861 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
HLA-F-218ENST00000376861 UQCR11O14957 56 aa7.57□□□□□ -1.2
HLA-F-218ENST00000376861 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
HLA-F-218ENST00000376861 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.2
HLA-F-218ENST00000376861 A6NED7 52 aa7.52□□□□□ -1.21
HLA-F-218ENST00000376861 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
HLA-F-218ENST00000376861 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
HLA-F-218ENST00000376861 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
HLA-F-218ENST00000376861 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
HLA-F-218ENST00000376861 USH2AO75445 5202 aa7.43□□□□□ -1.22
HLA-F-218ENST00000376861 A0A0D9SG42 100 aa7.4□□□□□ -1.22
HLA-F-218ENST00000376861 MT1BP07438 61 aa7.4□□□□□ -1.22
HLA-F-218ENST00000376861 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
HLA-F-218ENST00000376861 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
HLA-F-218ENST00000376861 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
HLA-F-218ENST00000376861 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
HLA-F-218ENST00000376861 A8MU10 97 aa7.37□□□□□ -1.23
HLA-F-218ENST00000376861 A6NN06 94 aa7.34□□□□□ -1.23
HLA-F-218ENST00000376861 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
HLA-F-218ENST00000376861 SSPOA2VEC9 5147 aa7.27□□□□□ -1.25
HLA-F-218ENST00000376861 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
HLA-F-218ENST00000376861 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
HLA-F-218ENST00000376861 KRTAP9-7A8MTY7 169 aa7.24□□□□□ -1.25
HLA-F-218ENST00000376861 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
HLA-F-218ENST00000376861 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
HLA-F-218ENST00000376861 K7ERS5 55 aa7.22□□□□□ -1.25
HLA-F-218ENST00000376861 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
HLA-F-218ENST00000376861 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
HLA-F-218ENST00000376861 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
HLA-F-218ENST00000376861 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
HLA-F-218ENST00000376861 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
HLA-F-218ENST00000376861 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
HLA-F-218ENST00000376861 MT1XP80297 61 aa7.06□□□□□ -1.28
HLA-F-218ENST00000376861 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.3
HLA-F-218ENST00000376861 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
HLA-F-218ENST00000376861 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
HLA-F-218ENST00000376861 ROMO1P60602 79 aa6.84□□□□□ -1.31
HLA-F-218ENST00000376861 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
HLA-F-218ENST00000376861 TNP1P09430 55 aa6.75□□□□□ -1.33
HLA-F-218ENST00000376861 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
HLA-F-218ENST00000376861 KRTAP10-12P60413 245 aa6.71□□□□□ -1.33
HLA-F-218ENST00000376861 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.33
HLA-F-218ENST00000376861 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
HLA-F-218ENST00000376861 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
HLA-F-218ENST00000376861 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
HLA-F-218ENST00000376861 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
HLA-F-218ENST00000376861 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
HLA-F-218ENST00000376861 KMT2DO14686 5537 aa6.54□□□□□ -1.36
HLA-F-218ENST00000376861 NEBP20929 6669 aa6.52□□□□□ -1.37
HLA-F-218ENST00000376861 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
HLA-F-218ENST00000376861 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
HLA-F-218ENST00000376861 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
HLA-F-218ENST00000376861 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
HLA-F-218ENST00000376861 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
HLA-F-218ENST00000376861 SPRR2EP22531 72 aa6.38□□□□□ -1.39
HLA-F-218ENST00000376861 SPRR2BP35325 72 aa6.38□□□□□ -1.39
HLA-F-218ENST00000376861 SPRR2AP35326 72 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms