RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 S4R3F8 94 aa10.01□□□□□ -0.81
NELFE-202ENST00000375429 H7BZZ5 65 aa10□□□□□ -0.81
NELFE-202ENST00000375429 LCA10Q71F78 164 aa9.98□□□□□ -0.81
NELFE-202ENST00000375429 KRTAP10-6P60371 365 aaPredicted RBP9.94□□□□□ -0.82
NELFE-202ENST00000375429 ACYP2P14621 99 aa9.92□□□□□ -0.82
NELFE-202ENST00000375429 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
NELFE-202ENST00000375429 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
NELFE-202ENST00000375429 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
NELFE-202ENST00000375429 ATP5EP56381 51 aaPredicted RBP9.79□□□□□ -0.84
NELFE-202ENST00000375429 TMEM258P61165 79 aa9.78□□□□□ -0.84
NELFE-202ENST00000375429 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
NELFE-202ENST00000375429 MT2AP02795 61 aa9.72□□□□□ -0.85
NELFE-202ENST00000375429 COA5Q86WW8 74 aa9.71□□□□□ -0.86
NELFE-202ENST00000375429 MT1FP04733 61 aa9.66□□□□□ -0.86
NELFE-202ENST00000375429 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.86
NELFE-202ENST00000375429 KRTAP10-10P60014 251 aa9.62□□□□□ -0.87
NELFE-202ENST00000375429 H0YAA0 97 aa9.56□□□□□ -0.88
NELFE-202ENST00000375429 ADM2Q7Z4H4 148 aa9.52□□□□□ -0.89
NELFE-202ENST00000375429 KRTAP9-3Q9BYQ3 159 aa9.47□□□□□ -0.89
NELFE-202ENST00000375429 SERP1Q9Y6X1 66 aa9.47□□□□□ -0.89
NELFE-202ENST00000375429 P0C880 135 aa9.41□□□□□ -0.9
NELFE-202ENST00000375429 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
NELFE-202ENST00000375429 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
NELFE-202ENST00000375429 KRTAP19-1Q8IUB9 90 aa9.32□□□□□ -0.92
NELFE-202ENST00000375429 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
NELFE-202ENST00000375429 LCE2BO14633 110 aa9.3□□□□□ -0.92
NELFE-202ENST00000375429 SEC61GP60059 68 aa9.28□□□□□ -0.92
NELFE-202ENST00000375429 SPRR2GQ9BYE4 73 aa9.28□□□□□ -0.92
NELFE-202ENST00000375429 R4GN34 69 aa9.2□□□□□ -0.94
NELFE-202ENST00000375429 A0A1B0GU69 56 aa9.19□□□□□ -0.94
NELFE-202ENST00000375429 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
NELFE-202ENST00000375429 SMIM26A0A096LP01 95 aa9.17□□□□□ -0.94
NELFE-202ENST00000375429 M0QZ58 72 aa9.16□□□□□ -0.94
NELFE-202ENST00000375429 USH2AO75445 5202 aa9.15□□□□□ -0.94
NELFE-202ENST00000375429 V9GYY9 64 aa9.15□□□□□ -0.95
NELFE-202ENST00000375429 PRR15LQ9BU68 103 aa9.14□□□□□ -0.95
NELFE-202ENST00000375429 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
NELFE-202ENST00000375429 FSIP2Q5CZC0 6907 aa9.08□□□□□ -0.96
NELFE-202ENST00000375429 Q1T7F1 81 aa9.08□□□□□ -0.96
NELFE-202ENST00000375429 A0A1B0GU33 70 aa9.07□□□□□ -0.96
NELFE-202ENST00000375429 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
NELFE-202ENST00000375429 MT1BP07438 61 aa9.04□□□□□ -0.96
NELFE-202ENST00000375429 Q5VV11 94 aa9.03□□□□□ -0.96
NELFE-202ENST00000375429 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
NELFE-202ENST00000375429 SPATA8Q6RVD6 105 aa8.97□□□□□ -0.97
NELFE-202ENST00000375429 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
NELFE-202ENST00000375429 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
NELFE-202ENST00000375429 PSPHP1O15172 72 aa8.91□□□□□ -0.98
NELFE-202ENST00000375429 UQCR11O14957 56 aa8.85□□□□□ -0.99
NELFE-202ENST00000375429 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
NELFE-202ENST00000375429 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
NELFE-202ENST00000375429 A0A0D9SG42 100 aa8.83□□□□□ -1
NELFE-202ENST00000375429 KRTAP19-6Q3LI70 58 aa8.83□□□□□ -1
NELFE-202ENST00000375429 A6NN06 94 aa8.82□□□□□ -1
NELFE-202ENST00000375429 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
NELFE-202ENST00000375429 A8MU10 97 aa8.77□□□□□ -1.01
NELFE-202ENST00000375429 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
NELFE-202ENST00000375429 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
NELFE-202ENST00000375429 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
NELFE-202ENST00000375429 A6NED7 52 aa8.67□□□□□ -1.02
NELFE-202ENST00000375429 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
NELFE-202ENST00000375429 FCGBPQ9Y6R7 5405 aaPredicted RBP8.65□□□□□ -1.02
NELFE-202ENST00000375429 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
NELFE-202ENST00000375429 MT1XP80297 61 aa8.63□□□□□ -1.03
NELFE-202ENST00000375429 PRO2289Q9P1D8 64 aa8.56□□□□□ -1.04
NELFE-202ENST00000375429 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
NELFE-202ENST00000375429 PRO0628Q9UI54 55 aa8.51□□□□□ -1.05
NELFE-202ENST00000375429 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
NELFE-202ENST00000375429 K7ERS5 55 aa8.44□□□□□ -1.06
NELFE-202ENST00000375429 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
NELFE-202ENST00000375429 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
NELFE-202ENST00000375429 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
NELFE-202ENST00000375429 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
NELFE-202ENST00000375429 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
NELFE-202ENST00000375429 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
NELFE-202ENST00000375429 KMT2DO14686 5537 aa8.13□□□□□ -1.11
NELFE-202ENST00000375429 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
NELFE-202ENST00000375429 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
NELFE-202ENST00000375429 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
NELFE-202ENST00000375429 TNP1P09430 55 aa8.06□□□□□ -1.12
NELFE-202ENST00000375429 KRTAP9-7A8MTY7 169 aa7.99□□□□□ -1.13
NELFE-202ENST00000375429 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
NELFE-202ENST00000375429 ROMO1P60602 79 aa7.96□□□□□ -1.14
NELFE-202ENST00000375429 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
NELFE-202ENST00000375429 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
NELFE-202ENST00000375429 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
NELFE-202ENST00000375429 KRTAP5-9P26371 169 aa7.86□□□□□ -1.15
NELFE-202ENST00000375429 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
NELFE-202ENST00000375429 KTN1-AS1Q86SY8 53 aa7.82□□□□□ -1.16
NELFE-202ENST00000375429 SPRR2FQ96RM1 72 aa7.79□□□□□ -1.16
NELFE-202ENST00000375429 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.17
NELFE-202ENST00000375429 MUC12Q9UKN1 5478 aa7.7□□□□□ -1.18
NELFE-202ENST00000375429 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
NELFE-202ENST00000375429 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
NELFE-202ENST00000375429 MT1EP04732 61 aa7.59□□□□□ -1.19
NELFE-202ENST00000375429 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
NELFE-202ENST00000375429 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
NELFE-202ENST00000375429 NEBP20929 6669 aa7.52□□□□□ -1.21
NELFE-202ENST00000375429 SPRR2EP22531 72 aa7.52□□□□□ -1.21
NELFE-202ENST00000375429 SPRR2BP35325 72 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms