RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
NECAB3-202ENST00000375238 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
NECAB3-202ENST00000375238 A6NN06 94 aa10.1□□□□□ -0.79
NECAB3-202ENST00000375238 LPAP08519 4548 aa10.08□□□□□ -0.8
NECAB3-202ENST00000375238 SPATA8Q6RVD6 105 aa10.07□□□□□ -0.8
NECAB3-202ENST00000375238 UQCR11O14957 56 aa10.03□□□□□ -0.8
NECAB3-202ENST00000375238 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
NECAB3-202ENST00000375238 LRP2P98164 4655 aa10.03□□□□□ -0.8
NECAB3-202ENST00000375238 MIR22HGQ0VDD5 57 aa10□□□□□ -0.81
NECAB3-202ENST00000375238 SEC61GP60059 68 aa9.99□□□□□ -0.81
NECAB3-202ENST00000375238 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
NECAB3-202ENST00000375238 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
NECAB3-202ENST00000375238 HERC1Q15751 4861 aa9.88□□□□□ -0.83
NECAB3-202ENST00000375238 H0YAA0 97 aa9.79□□□□□ -0.84
NECAB3-202ENST00000375238 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
NECAB3-202ENST00000375238 HMCN2Q8NDA2 5059 aa9.78□□□□□ -0.84
NECAB3-202ENST00000375238 A0A1B0GU33 70 aa9.78□□□□□ -0.84
NECAB3-202ENST00000375238 H1FX-AS1Q4G0G2 97 aa9.76□□□□□ -0.85
NECAB3-202ENST00000375238 RBM12B-AS1Q9P1G2 102 aa9.74□□□□□ -0.85
NECAB3-202ENST00000375238 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
NECAB3-202ENST00000375238 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
NECAB3-202ENST00000375238 S4R3F8 94 aa9.66□□□□□ -0.86
NECAB3-202ENST00000375238 KRTAP10-6P60371 365 aaPredicted RBP9.62□□□□□ -0.87
NECAB3-202ENST00000375238 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
NECAB3-202ENST00000375238 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
NECAB3-202ENST00000375238 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
NECAB3-202ENST00000375238 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
NECAB3-202ENST00000375238 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
NECAB3-202ENST00000375238 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
NECAB3-202ENST00000375238 P0C880 135 aa9.44□□□□□ -0.9
NECAB3-202ENST00000375238 MUC2Q02817 5179 aa9.41□□□□□ -0.9
NECAB3-202ENST00000375238 CSAG1Q6PB30 78 aa9.38□□□□□ -0.91
NECAB3-202ENST00000375238 K7ERS5 55 aa9.35□□□□□ -0.91
NECAB3-202ENST00000375238 UBR4Q5T4S7 5183 aa9.34□□□□□ -0.91
NECAB3-202ENST00000375238 A0A0D9SG42 100 aa9.31□□□□□ -0.92
NECAB3-202ENST00000375238 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
NECAB3-202ENST00000375238 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
NECAB3-202ENST00000375238 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
NECAB3-202ENST00000375238 M0QZ58 72 aa9.15□□□□□ -0.95
NECAB3-202ENST00000375238 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.95
NECAB3-202ENST00000375238 ROMO1P60602 79 aa9.14□□□□□ -0.95
NECAB3-202ENST00000375238 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
NECAB3-202ENST00000375238 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
NECAB3-202ENST00000375238 KRTAP12-1P59990 96 aa9.09□□□□□ -0.95
NECAB3-202ENST00000375238 MT1HP80294 61 aa9.05□□□□□ -0.96
NECAB3-202ENST00000375238 FAT4Q6V0I7 4981 aa9.04□□□□□ -0.96
NECAB3-202ENST00000375238 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
NECAB3-202ENST00000375238 M0R2T5 61 aa9.02□□□□□ -0.97
NECAB3-202ENST00000375238 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
NECAB3-202ENST00000375238 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
NECAB3-202ENST00000375238 R4GN34 69 aa8.93□□□□□ -0.98
NECAB3-202ENST00000375238 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
NECAB3-202ENST00000375238 MT2AP02795 61 aa8.71□□□□□ -1.02
NECAB3-202ENST00000375238 KRTAP9-8Q9BYQ0 159 aa8.71□□□□□ -1.02
NECAB3-202ENST00000375238 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
NECAB3-202ENST00000375238 MT1FP04733 61 aa8.66□□□□□ -1.02
NECAB3-202ENST00000375238 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
NECAB3-202ENST00000375238 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
NECAB3-202ENST00000375238 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
NECAB3-202ENST00000375238 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
NECAB3-202ENST00000375238 H3BS24 57 aa8.42□□□□□ -1.06
NECAB3-202ENST00000375238 KRTAP9-3Q9BYQ3 159 aa8.39□□□□□ -1.07
NECAB3-202ENST00000375238 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
NECAB3-202ENST00000375238 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
NECAB3-202ENST00000375238 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
NECAB3-202ENST00000375238 LCE2BO14633 110 aa8.21□□□□□ -1.1
NECAB3-202ENST00000375238 MT1BP07438 61 aa8.21□□□□□ -1.1
NECAB3-202ENST00000375238 PP632Q6XCG6 107 aa8.19□□□□□ -1.1
NECAB3-202ENST00000375238 TNP1P09430 55 aa8.12□□□□□ -1.11
NECAB3-202ENST00000375238 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
NECAB3-202ENST00000375238 NDUFAF8A1L188 74 aa7.96□□□□□ -1.13
NECAB3-202ENST00000375238 MT1XP80297 61 aa7.95□□□□□ -1.14
NECAB3-202ENST00000375238 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
NECAB3-202ENST00000375238 USH2AO75445 5202 aa7.88□□□□□ -1.15
NECAB3-202ENST00000375238 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
NECAB3-202ENST00000375238 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
NECAB3-202ENST00000375238 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
NECAB3-202ENST00000375238 KRTAP10-7P60409 375 aaPredicted RBP7.65□□□□□ -1.18
NECAB3-202ENST00000375238 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
NECAB3-202ENST00000375238 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
NECAB3-202ENST00000375238 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
NECAB3-202ENST00000375238 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
NECAB3-202ENST00000375238 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
NECAB3-202ENST00000375238 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
NECAB3-202ENST00000375238 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
NECAB3-202ENST00000375238 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
NECAB3-202ENST00000375238 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
NECAB3-202ENST00000375238 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
NECAB3-202ENST00000375238 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
NECAB3-202ENST00000375238 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
NECAB3-202ENST00000375238 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.25
NECAB3-202ENST00000375238 KMT2DO14686 5537 aa7.26□□□□□ -1.25
NECAB3-202ENST00000375238 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.25
NECAB3-202ENST00000375238 A0A0A0MQY5 61 aa7.21□□□□□ -1.26
NECAB3-202ENST00000375238 KRTAP19-7Q3SYF9 63 aa7.09□□□□□ -1.27
NECAB3-202ENST00000375238 MT1EP04732 61 aa6.96□□□□□ -1.3
NECAB3-202ENST00000375238 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
NECAB3-202ENST00000375238 MACF1Q9UPN3 7388 aaKnown RBP6.95□□□□□ -1.3
NECAB3-202ENST00000375238 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
NECAB3-202ENST00000375238 MT1LQ93083 61 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms