RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 LCA10Q71F78 164 aa8.41□□□□□ -1.06
HLA-DMA-201ENST00000374843 MT1HP80294 61 aa8.4□□□□□ -1.06
HLA-DMA-201ENST00000374843 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
HLA-DMA-201ENST00000374843 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
HLA-DMA-201ENST00000374843 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
HLA-DMA-201ENST00000374843 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
HLA-DMA-201ENST00000374843 CSAG1Q6PB30 78 aa8.28□□□□□ -1.08
HLA-DMA-201ENST00000374843 LCE2AQ5TA79 106 aaPredicted RBP8.27□□□□□ -1.09
HLA-DMA-201ENST00000374843 RPS28P62857 69 aaKnown RBP8.24□□□□□ -1.09
HLA-DMA-201ENST00000374843 M0R2T5 61 aa8.21□□□□□ -1.1
HLA-DMA-201ENST00000374843 H0YAA0 97 aa8.15□□□□□ -1.1
HLA-DMA-201ENST00000374843 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
HLA-DMA-201ENST00000374843 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
HLA-DMA-201ENST00000374843 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
HLA-DMA-201ENST00000374843 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
HLA-DMA-201ENST00000374843 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
HLA-DMA-201ENST00000374843 KRTAP3-2Q9BYR7 98 aa8.04□□□□□ -1.12
HLA-DMA-201ENST00000374843 MT2AP02795 61 aa8.02□□□□□ -1.13
HLA-DMA-201ENST00000374843 Q1T7F1 81 aa8.02□□□□□ -1.13
HLA-DMA-201ENST00000374843 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
HLA-DMA-201ENST00000374843 V9GYY9 64 aa8.01□□□□□ -1.13
HLA-DMA-201ENST00000374843 SEC61GP60059 68 aa7.97□□□□□ -1.13
HLA-DMA-201ENST00000374843 A0A1B0GU69 56 aa7.96□□□□□ -1.14
HLA-DMA-201ENST00000374843 MT1FP04733 61 aa7.96□□□□□ -1.14
HLA-DMA-201ENST00000374843 P0C880 135 aa7.96□□□□□ -1.14
HLA-DMA-201ENST00000374843 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
HLA-DMA-201ENST00000374843 KRTAP10-10P60014 251 aa7.88□□□□□ -1.15
HLA-DMA-201ENST00000374843 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
HLA-DMA-201ENST00000374843 PSPHP1O15172 72 aa7.82□□□□□ -1.16
HLA-DMA-201ENST00000374843 Q5VV11 94 aa7.81□□□□□ -1.16
HLA-DMA-201ENST00000374843 A0A1B0GU33 70 aa7.8□□□□□ -1.16
HLA-DMA-201ENST00000374843 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
HLA-DMA-201ENST00000374843 M0QZ58 72 aa7.77□□□□□ -1.17
HLA-DMA-201ENST00000374843 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
HLA-DMA-201ENST00000374843 R4GN34 69 aa7.75□□□□□ -1.17
HLA-DMA-201ENST00000374843 KRTAP19-1Q8IUB9 90 aa7.74□□□□□ -1.17
HLA-DMA-201ENST00000374843 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
HLA-DMA-201ENST00000374843 UQCR11O14957 56 aa7.69□□□□□ -1.18
HLA-DMA-201ENST00000374843 SPATA8Q6RVD6 105 aa7.65□□□□□ -1.18
HLA-DMA-201ENST00000374843 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
HLA-DMA-201ENST00000374843 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
HLA-DMA-201ENST00000374843 A6NED7 52 aa7.59□□□□□ -1.19
HLA-DMA-201ENST00000374843 LCE2BO14633 110 aa7.58□□□□□ -1.2
HLA-DMA-201ENST00000374843 MIR22HGQ0VDD5 57 aa7.58□□□□□ -1.2
HLA-DMA-201ENST00000374843 A6NN06 94 aa7.55□□□□□ -1.2
HLA-DMA-201ENST00000374843 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
HLA-DMA-201ENST00000374843 A8MU10 97 aa7.52□□□□□ -1.21
HLA-DMA-201ENST00000374843 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
HLA-DMA-201ENST00000374843 A0A0D9SG42 100 aa7.5□□□□□ -1.21
HLA-DMA-201ENST00000374843 MT1BP07438 61 aa7.5□□□□□ -1.21
HLA-DMA-201ENST00000374843 USH2AO75445 5202 aa7.5□□□□□ -1.21
HLA-DMA-201ENST00000374843 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
HLA-DMA-201ENST00000374843 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
HLA-DMA-201ENST00000374843 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
HLA-DMA-201ENST00000374843 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
HLA-DMA-201ENST00000374843 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
HLA-DMA-201ENST00000374843 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
HLA-DMA-201ENST00000374843 BRK1Q8WUW1 75 aa7.32□□□□□ -1.24
HLA-DMA-201ENST00000374843 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
HLA-DMA-201ENST00000374843 K7ERS5 55 aa7.27□□□□□ -1.25
HLA-DMA-201ENST00000374843 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
HLA-DMA-201ENST00000374843 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
HLA-DMA-201ENST00000374843 MT1XP80297 61 aa7.21□□□□□ -1.26
HLA-DMA-201ENST00000374843 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
HLA-DMA-201ENST00000374843 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
HLA-DMA-201ENST00000374843 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
HLA-DMA-201ENST00000374843 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
HLA-DMA-201ENST00000374843 PRO0628Q9UI54 55 aa7.08□□□□□ -1.28
HLA-DMA-201ENST00000374843 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
HLA-DMA-201ENST00000374843 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
HLA-DMA-201ENST00000374843 ROMO1P60602 79 aa6.95□□□□□ -1.3
HLA-DMA-201ENST00000374843 PMAIP1Q13794 54 aa6.91□□□□□ -1.3
HLA-DMA-201ENST00000374843 TNP1P09430 55 aa6.86□□□□□ -1.31
HLA-DMA-201ENST00000374843 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
HLA-DMA-201ENST00000374843 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
HLA-DMA-201ENST00000374843 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
HLA-DMA-201ENST00000374843 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
HLA-DMA-201ENST00000374843 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
HLA-DMA-201ENST00000374843 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
HLA-DMA-201ENST00000374843 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
HLA-DMA-201ENST00000374843 KTN1-AS1Q86SY8 53 aa6.61□□□□□ -1.35
HLA-DMA-201ENST00000374843 KMT2DO14686 5537 aa6.61□□□□□ -1.35
HLA-DMA-201ENST00000374843 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
HLA-DMA-201ENST00000374843 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
HLA-DMA-201ENST00000374843 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
HLA-DMA-201ENST00000374843 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
HLA-DMA-201ENST00000374843 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
HLA-DMA-201ENST00000374843 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
HLA-DMA-201ENST00000374843 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
HLA-DMA-201ENST00000374843 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
HLA-DMA-201ENST00000374843 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
HLA-DMA-201ENST00000374843 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
HLA-DMA-201ENST00000374843 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
HLA-DMA-201ENST00000374843 SYNE2Q8WXH0 6885 aaKnown RBP6.36□□□□□ -1.39
HLA-DMA-201ENST00000374843 MT1EP04732 61 aa6.34□□□□□ -1.39
HLA-DMA-201ENST00000374843 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
HLA-DMA-201ENST00000374843 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
HLA-DMA-201ENST00000374843 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
HLA-DMA-201ENST00000374843 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
HLA-DMA-201ENST00000374843 MT1LQ93083 61 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms