RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
HMGCL-202ENST00000374487 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
HMGCL-202ENST00000374487 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
HMGCL-202ENST00000374487 PMAIP1Q13794 54 aa6.43□□□□□ -1.38
HMGCL-202ENST00000374487 RNF213Q63HN8 5207 aa6.42□□□□□ -1.38
HMGCL-202ENST00000374487 SEC61GP60059 68 aa6.37□□□□□ -1.39
HMGCL-202ENST00000374487 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
HMGCL-202ENST00000374487 UQCR11O14957 56 aa6.35□□□□□ -1.39
HMGCL-202ENST00000374487 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
HMGCL-202ENST00000374487 XP32Q5T750 250 aa6.34□□□□□ -1.4
HMGCL-202ENST00000374487 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.4
HMGCL-202ENST00000374487 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
HMGCL-202ENST00000374487 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
HMGCL-202ENST00000374487 MUC2Q02817 5179 aa6.29□□□□□ -1.4
HMGCL-202ENST00000374487 A6NN06 94 aa6.28□□□□□ -1.4
HMGCL-202ENST00000374487 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
HMGCL-202ENST00000374487 TPRXLQ17RH7 258 aa6.21□□□□□ -1.41
HMGCL-202ENST00000374487 A0A1B0GU33 70 aa6.18□□□□□ -1.42
HMGCL-202ENST00000374487 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
HMGCL-202ENST00000374487 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.43
HMGCL-202ENST00000374487 S4R3F8 94 aa6.14□□□□□ -1.43
HMGCL-202ENST00000374487 H0YAA0 97 aa6.13□□□□□ -1.43
HMGCL-202ENST00000374487 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
HMGCL-202ENST00000374487 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
HMGCL-202ENST00000374487 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
HMGCL-202ENST00000374487 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
HMGCL-202ENST00000374487 KRTAP10-6P60371 365 aaPredicted RBP6.01□□□□□ -1.45
HMGCL-202ENST00000374487 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
HMGCL-202ENST00000374487 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
HMGCL-202ENST00000374487 K7ERS5 55 aa5.98□□□□□ -1.45
HMGCL-202ENST00000374487 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
HMGCL-202ENST00000374487 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
HMGCL-202ENST00000374487 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
HMGCL-202ENST00000374487 P0C880 135 aa5.94□□□□□ -1.46
HMGCL-202ENST00000374487 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
HMGCL-202ENST00000374487 A0A0D9SG42 100 aa5.91□□□□□ -1.46
HMGCL-202ENST00000374487 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
HMGCL-202ENST00000374487 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
HMGCL-202ENST00000374487 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HMGCL-202ENST00000374487 M0QZ58 72 aa5.79□□□□□ -1.48
HMGCL-202ENST00000374487 MT1HP80294 61 aa5.77□□□□□ -1.49
HMGCL-202ENST00000374487 ROMO1P60602 79 aa5.76□□□□□ -1.49
HMGCL-202ENST00000374487 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
HMGCL-202ENST00000374487 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
HMGCL-202ENST00000374487 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
HMGCL-202ENST00000374487 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
HMGCL-202ENST00000374487 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
HMGCL-202ENST00000374487 R4GN34 69 aa5.71□□□□□ -1.5
HMGCL-202ENST00000374487 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
HMGCL-202ENST00000374487 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
HMGCL-202ENST00000374487 M0R2T5 61 aa5.64□□□□□ -1.51
HMGCL-202ENST00000374487 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
HMGCL-202ENST00000374487 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
HMGCL-202ENST00000374487 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
HMGCL-202ENST00000374487 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
HMGCL-202ENST00000374487 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
HMGCL-202ENST00000374487 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
HMGCL-202ENST00000374487 MT2AP02795 61 aa5.42□□□□□ -1.54
HMGCL-202ENST00000374487 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
HMGCL-202ENST00000374487 MT1FP04733 61 aa5.4□□□□□ -1.55
HMGCL-202ENST00000374487 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
HMGCL-202ENST00000374487 USH2AO75445 5202 aa5.34□□□□□ -1.55
HMGCL-202ENST00000374487 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
HMGCL-202ENST00000374487 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
HMGCL-202ENST00000374487 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
HMGCL-202ENST00000374487 LCE2BO14633 110 aa5.28□□□□□ -1.56
HMGCL-202ENST00000374487 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
HMGCL-202ENST00000374487 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
HMGCL-202ENST00000374487 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
HMGCL-202ENST00000374487 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
HMGCL-202ENST00000374487 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
HMGCL-202ENST00000374487 TNP1P09430 55 aa5.17□□□□□ -1.58
HMGCL-202ENST00000374487 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
HMGCL-202ENST00000374487 H3BS24 57 aa5.11□□□□□ -1.59
HMGCL-202ENST00000374487 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
HMGCL-202ENST00000374487 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
HMGCL-202ENST00000374487 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
HMGCL-202ENST00000374487 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
HMGCL-202ENST00000374487 MT1BP07438 61 aa4.98□□□□□ -1.61
HMGCL-202ENST00000374487 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
HMGCL-202ENST00000374487 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
HMGCL-202ENST00000374487 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
HMGCL-202ENST00000374487 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.62
HMGCL-202ENST00000374487 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
HMGCL-202ENST00000374487 MT1XP80297 61 aa4.88□□□□□ -1.63
HMGCL-202ENST00000374487 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
HMGCL-202ENST00000374487 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
HMGCL-202ENST00000374487 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
HMGCL-202ENST00000374487 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
HMGCL-202ENST00000374487 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
HMGCL-202ENST00000374487 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
HMGCL-202ENST00000374487 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
HMGCL-202ENST00000374487 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
HMGCL-202ENST00000374487 KMT2DO14686 5537 aa4.69□□□□□ -1.66
HMGCL-202ENST00000374487 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
HMGCL-202ENST00000374487 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
HMGCL-202ENST00000374487 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
HMGCL-202ENST00000374487 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
HMGCL-202ENST00000374487 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
HMGCL-202ENST00000374487 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms