RNA–Protein interactions for RNA: ENST00000372596.5

SCMH1-206, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,323 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-206ENST00000372596 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
SCMH1-206ENST00000372596 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
SCMH1-206ENST00000372596 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
SCMH1-206ENST00000372596 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
SCMH1-206ENST00000372596 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
SCMH1-206ENST00000372596 HERC2O95714 4834 aa5.17□□□□□ -1.58
SCMH1-206ENST00000372596 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
SCMH1-206ENST00000372596 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
SCMH1-206ENST00000372596 KRTAP1-4P0C5Y4 121 aa5.17□□□□□ -1.58
SCMH1-206ENST00000372596 HSPG2P98160 4391 aa5.16□□□□□ -1.58
SCMH1-206ENST00000372596 K7ERS5 55 aa5.15□□□□□ -1.58
SCMH1-206ENST00000372596 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
SCMH1-206ENST00000372596 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
SCMH1-206ENST00000372596 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
SCMH1-206ENST00000372596 Q5VSD8 79 aa5.13□□□□□ -1.59
SCMH1-206ENST00000372596 COX6B2Q6YFQ2 88 aa5.13□□□□□ -1.59
SCMH1-206ENST00000372596 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
SCMH1-206ENST00000372596 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
SCMH1-206ENST00000372596 HERC1Q15751 4861 aa5.05□□□□□ -1.6
SCMH1-206ENST00000372596 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
SCMH1-206ENST00000372596 J3QL48 77 aa5.02□□□□□ -1.61
SCMH1-206ENST00000372596 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
SCMH1-206ENST00000372596 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
SCMH1-206ENST00000372596 A0A0D9SG42 100 aa4.93□□□□□ -1.62
SCMH1-206ENST00000372596 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
SCMH1-206ENST00000372596 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
SCMH1-206ENST00000372596 LUZP6Q538Z0 58 aa4.9□□□□□ -1.62
SCMH1-206ENST00000372596 S4R3F8 94 aa4.89□□□□□ -1.63
SCMH1-206ENST00000372596 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
SCMH1-206ENST00000372596 XP32Q5T750 250 aa4.88□□□□□ -1.63
SCMH1-206ENST00000372596 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
SCMH1-206ENST00000372596 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
SCMH1-206ENST00000372596 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.64
SCMH1-206ENST00000372596 UBR4Q5T4S7 5183 aa4.81□□□□□ -1.64
SCMH1-206ENST00000372596 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
SCMH1-206ENST00000372596 PKHD1L1Q86WI1 4243 aa4.8□□□□□ -1.64
SCMH1-206ENST00000372596 LRP2P98164 4655 aa4.8□□□□□ -1.64
SCMH1-206ENST00000372596 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
SCMH1-206ENST00000372596 RNF213Q63HN8 5207 aa4.75□□□□□ -1.65
SCMH1-206ENST00000372596 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
SCMH1-206ENST00000372596 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.66
SCMH1-206ENST00000372596 LPAP08519 4548 aa4.71□□□□□ -1.66
SCMH1-206ENST00000372596 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
SCMH1-206ENST00000372596 TNXBP22105 4242 aa4.7□□□□□ -1.66
SCMH1-206ENST00000372596 MUC2Q02817 5179 aa4.65□□□□□ -1.67
SCMH1-206ENST00000372596 M0QZ58 72 aa4.59□□□□□ -1.67
SCMH1-206ENST00000372596 SEC61BP60468 96 aaKnown RBP4.58□□□□□ -1.68
SCMH1-206ENST00000372596 FAT4Q6V0I7 4981 aa4.46□□□□□ -1.69
SCMH1-206ENST00000372596 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
SCMH1-206ENST00000372596 R4GN34 69 aa4.4□□□□□ -1.71
SCMH1-206ENST00000372596 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
SCMH1-206ENST00000372596 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
SCMH1-206ENST00000372596 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.72
SCMH1-206ENST00000372596 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
SCMH1-206ENST00000372596 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
SCMH1-206ENST00000372596 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
SCMH1-206ENST00000372596 M0R2T5 61 aa4.22□□□□□ -1.73
SCMH1-206ENST00000372596 MUC17Q685J3 4493 aa4.21□□□□□ -1.74
SCMH1-206ENST00000372596 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
SCMH1-206ENST00000372596 INE1O15225 51 aa4.16□□□□□ -1.74
SCMH1-206ENST00000372596 TNP1P09430 55 aa4.09□□□□□ -1.76
SCMH1-206ENST00000372596 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
SCMH1-206ENST00000372596 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
SCMH1-206ENST00000372596 MT1HP80294 61 aa4.06□□□□□ -1.76
SCMH1-206ENST00000372596 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
SCMH1-206ENST00000372596 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
SCMH1-206ENST00000372596 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
SCMH1-206ENST00000372596 USH2AO75445 5202 aa3.98□□□□□ -1.77
SCMH1-206ENST00000372596 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
SCMH1-206ENST00000372596 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
SCMH1-206ENST00000372596 MT1FP04733 61 aa3.85□□□□□ -1.79
SCMH1-206ENST00000372596 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
SCMH1-206ENST00000372596 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
SCMH1-206ENST00000372596 MT2AP02795 61 aa3.82□□□□□ -1.8
SCMH1-206ENST00000372596 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
SCMH1-206ENST00000372596 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
SCMH1-206ENST00000372596 KRTAP8-1Q8IUC2 63 aa3.79□□□□□ -1.8
SCMH1-206ENST00000372596 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
SCMH1-206ENST00000372596 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.8
SCMH1-206ENST00000372596 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
SCMH1-206ENST00000372596 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
SCMH1-206ENST00000372596 LCE2BO14633 110 aa3.71□□□□□ -1.82
SCMH1-206ENST00000372596 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
SCMH1-206ENST00000372596 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
SCMH1-206ENST00000372596 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.82
SCMH1-206ENST00000372596 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
SCMH1-206ENST00000372596 MT1BP07438 61 aa3.64□□□□□ -1.83
SCMH1-206ENST00000372596 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
SCMH1-206ENST00000372596 KMT2DO14686 5537 aa3.64□□□□□ -1.83
SCMH1-206ENST00000372596 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
SCMH1-206ENST00000372596 MT1XP80297 61 aa3.62□□□□□ -1.83
SCMH1-206ENST00000372596 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
SCMH1-206ENST00000372596 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
SCMH1-206ENST00000372596 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
SCMH1-206ENST00000372596 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
SCMH1-206ENST00000372596 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
SCMH1-206ENST00000372596 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
SCMH1-206ENST00000372596 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
SCMH1-206ENST00000372596 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
SCMH1-206ENST00000372596 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms