RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 M0R2T5 61 aa7.69□□□□□ -1.18
TMEM53-204ENST00000372243 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
TMEM53-204ENST00000372243 TMEM258P61165 79 aa7.67□□□□□ -1.18
TMEM53-204ENST00000372243 KRTAP3-3Q9BYR6 98 aa7.65□□□□□ -1.18
TMEM53-204ENST00000372243 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
TMEM53-204ENST00000372243 CHKB-CPT1BH3BT56 60 aa7.58□□□□□ -1.2
TMEM53-204ENST00000372243 COA5Q86WW8 74 aa7.58□□□□□ -1.2
TMEM53-204ENST00000372243 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
TMEM53-204ENST00000372243 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
TMEM53-204ENST00000372243 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
TMEM53-204ENST00000372243 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
TMEM53-204ENST00000372243 H0YAA0 97 aa7.45□□□□□ -1.22
TMEM53-204ENST00000372243 MT2AP02795 61 aa7.42□□□□□ -1.22
TMEM53-204ENST00000372243 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
TMEM53-204ENST00000372243 MT1FP04733 61 aa7.36□□□□□ -1.23
TMEM53-204ENST00000372243 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
TMEM53-204ENST00000372243 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
TMEM53-204ENST00000372243 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
TMEM53-204ENST00000372243 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
TMEM53-204ENST00000372243 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
TMEM53-204ENST00000372243 P0C880 135 aa7.25□□□□□ -1.25
TMEM53-204ENST00000372243 SEC61GP60059 68 aa7.25□□□□□ -1.25
TMEM53-204ENST00000372243 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
TMEM53-204ENST00000372243 SVIPQ8NHG7 77 aa7.2□□□□□ -1.26
TMEM53-204ENST00000372243 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
TMEM53-204ENST00000372243 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
TMEM53-204ENST00000372243 A0A1B0GU69 56 aa7.18□□□□□ -1.26
TMEM53-204ENST00000372243 LCE2DQ5TA82 110 aaPredicted RBP7.18□□□□□ -1.26
TMEM53-204ENST00000372243 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.27
TMEM53-204ENST00000372243 V9GYY9 64 aa7.15□□□□□ -1.27
TMEM53-204ENST00000372243 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
TMEM53-204ENST00000372243 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
TMEM53-204ENST00000372243 Q1T7F1 81 aa7.12□□□□□ -1.27
TMEM53-204ENST00000372243 R4GN34 69 aa7.12□□□□□ -1.27
TMEM53-204ENST00000372243 M0QZ58 72 aa7.09□□□□□ -1.27
TMEM53-204ENST00000372243 A0A1B0GU33 70 aa7.07□□□□□ -1.28
TMEM53-204ENST00000372243 LCE2BO14633 110 aa7.06□□□□□ -1.28
TMEM53-204ENST00000372243 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
TMEM53-204ENST00000372243 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
TMEM53-204ENST00000372243 Q5VV11 94 aa7.01□□□□□ -1.29
TMEM53-204ENST00000372243 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
TMEM53-204ENST00000372243 PSPHP1O15172 72 aa6.96□□□□□ -1.29
TMEM53-204ENST00000372243 USH2AO75445 5202 aa6.95□□□□□ -1.3
TMEM53-204ENST00000372243 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
TMEM53-204ENST00000372243 UQCR11O14957 56 aa6.92□□□□□ -1.3
TMEM53-204ENST00000372243 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
TMEM53-204ENST00000372243 MT1BP07438 61 aa6.91□□□□□ -1.3
TMEM53-204ENST00000372243 A6NN06 94 aa6.88□□□□□ -1.31
TMEM53-204ENST00000372243 FSIP2Q5CZC0 6907 aa6.85□□□□□ -1.31
TMEM53-204ENST00000372243 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
TMEM53-204ENST00000372243 A0A0D9SG42 100 aa6.82□□□□□ -1.32
TMEM53-204ENST00000372243 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
TMEM53-204ENST00000372243 A8MU10 97 aa6.78□□□□□ -1.32
TMEM53-204ENST00000372243 A6NED7 52 aa6.78□□□□□ -1.32
TMEM53-204ENST00000372243 SSPOA2VEC9 5147 aa6.77□□□□□ -1.33
TMEM53-204ENST00000372243 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
TMEM53-204ENST00000372243 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
TMEM53-204ENST00000372243 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
TMEM53-204ENST00000372243 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
TMEM53-204ENST00000372243 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
TMEM53-204ENST00000372243 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
TMEM53-204ENST00000372243 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
TMEM53-204ENST00000372243 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
TMEM53-204ENST00000372243 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
TMEM53-204ENST00000372243 MT1XP80297 61 aa6.61□□□□□ -1.35
TMEM53-204ENST00000372243 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
TMEM53-204ENST00000372243 K7ERS5 55 aa6.57□□□□□ -1.36
TMEM53-204ENST00000372243 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
TMEM53-204ENST00000372243 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
TMEM53-204ENST00000372243 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
TMEM53-204ENST00000372243 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
TMEM53-204ENST00000372243 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
TMEM53-204ENST00000372243 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
TMEM53-204ENST00000372243 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
TMEM53-204ENST00000372243 TNP1P09430 55 aa6.27□□□□□ -1.41
TMEM53-204ENST00000372243 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
TMEM53-204ENST00000372243 ROMO1P60602 79 aa6.23□□□□□ -1.41
TMEM53-204ENST00000372243 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
TMEM53-204ENST00000372243 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
TMEM53-204ENST00000372243 KMT2DO14686 5537 aa6.15□□□□□ -1.43
TMEM53-204ENST00000372243 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
TMEM53-204ENST00000372243 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
TMEM53-204ENST00000372243 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
TMEM53-204ENST00000372243 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
TMEM53-204ENST00000372243 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
TMEM53-204ENST00000372243 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
TMEM53-204ENST00000372243 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
TMEM53-204ENST00000372243 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
TMEM53-204ENST00000372243 KRTAP5-9P26371 169 aa6.01□□□□□ -1.45
TMEM53-204ENST00000372243 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
TMEM53-204ENST00000372243 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
TMEM53-204ENST00000372243 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
TMEM53-204ENST00000372243 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
TMEM53-204ENST00000372243 MT1EP04732 61 aa5.83□□□□□ -1.48
TMEM53-204ENST00000372243 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
TMEM53-204ENST00000372243 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
TMEM53-204ENST00000372243 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
TMEM53-204ENST00000372243 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
TMEM53-204ENST00000372243 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
TMEM53-204ENST00000372243 NEBP20929 6669 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms