RNA–Protein interactions for RNA: ENST00000370384.7

KHDC1-202, Transcript of KH domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KHDC1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-202ENST00000370384 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
KHDC1-202ENST00000370384 PCP4P48539 62 aa9.02□□□□□ -0.97
KHDC1-202ENST00000370384 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
KHDC1-202ENST00000370384 CSAG1Q6PB30 78 aa8.97□□□□□ -0.97
KHDC1-202ENST00000370384 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
KHDC1-202ENST00000370384 CHKB-CPT1BH3BT56 60 aa8.93□□□□□ -0.98
KHDC1-202ENST00000370384 COA5Q86WW8 74 aa8.9□□□□□ -0.98
KHDC1-202ENST00000370384 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
KHDC1-202ENST00000370384 TMEM258P61165 79 aa8.88□□□□□ -0.99
KHDC1-202ENST00000370384 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
KHDC1-202ENST00000370384 ATP5EP56381 51 aaPredicted RBP8.85□□□□□ -0.99
KHDC1-202ENST00000370384 MT2AP02795 61 aa8.83□□□□□ -1
KHDC1-202ENST00000370384 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
KHDC1-202ENST00000370384 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
KHDC1-202ENST00000370384 MT1FP04733 61 aa8.78□□□□□ -1
KHDC1-202ENST00000370384 KRTAP10-10P60014 251 aa8.77□□□□□ -1.01
KHDC1-202ENST00000370384 ADM2Q7Z4H4 148 aa8.71□□□□□ -1.02
KHDC1-202ENST00000370384 H0YAA0 97 aa8.67□□□□□ -1.02
KHDC1-202ENST00000370384 SERP1Q9Y6X1 66 aa8.63□□□□□ -1.03
KHDC1-202ENST00000370384 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
KHDC1-202ENST00000370384 P0C880 135 aa8.6□□□□□ -1.03
KHDC1-202ENST00000370384 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
KHDC1-202ENST00000370384 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
KHDC1-202ENST00000370384 SEC61GP60059 68 aa8.48□□□□□ -1.05
KHDC1-202ENST00000370384 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
KHDC1-202ENST00000370384 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
KHDC1-202ENST00000370384 LCE2BO14633 110 aa8.44□□□□□ -1.06
KHDC1-202ENST00000370384 A0A1B0GU69 56 aa8.42□□□□□ -1.06
KHDC1-202ENST00000370384 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
KHDC1-202ENST00000370384 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
KHDC1-202ENST00000370384 R4GN34 69 aa8.4□□□□□ -1.06
KHDC1-202ENST00000370384 RPS28P62857 69 aaKnown RBP8.39□□□□□ -1.07
KHDC1-202ENST00000370384 M0QZ58 72 aa8.38□□□□□ -1.07
KHDC1-202ENST00000370384 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
KHDC1-202ENST00000370384 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
KHDC1-202ENST00000370384 A0A1B0GU33 70 aa8.3□□□□□ -1.08
KHDC1-202ENST00000370384 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
KHDC1-202ENST00000370384 LINC01554Q52M75 96 aa8.28□□□□□ -1.08
KHDC1-202ENST00000370384 Q1T7F1 81 aa8.27□□□□□ -1.09
KHDC1-202ENST00000370384 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
KHDC1-202ENST00000370384 V9GYY9 64 aa8.26□□□□□ -1.09
KHDC1-202ENST00000370384 CRCT1Q9UGL9 99 aa8.25□□□□□ -1.09
KHDC1-202ENST00000370384 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
KHDC1-202ENST00000370384 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
KHDC1-202ENST00000370384 Q5VV11 94 aa8.22□□□□□ -1.09
KHDC1-202ENST00000370384 PSPHP1O15172 72 aa8.21□□□□□ -1.09
KHDC1-202ENST00000370384 MT1BP07438 61 aa8.2□□□□□ -1.1
KHDC1-202ENST00000370384 USH2AO75445 5202 aa8.19□□□□□ -1.1
KHDC1-202ENST00000370384 A0A0D9SG42 100 aa8.13□□□□□ -1.11
KHDC1-202ENST00000370384 UQCR11O14957 56 aa8.07□□□□□ -1.12
KHDC1-202ENST00000370384 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
KHDC1-202ENST00000370384 A8MU10 97 aa8.06□□□□□ -1.12
KHDC1-202ENST00000370384 SSPOA2VEC9 5147 aa8□□□□□ -1.13
KHDC1-202ENST00000370384 A6NN06 94 aa7.99□□□□□ -1.13
KHDC1-202ENST00000370384 MIR22HGQ0VDD5 57 aa7.97□□□□□ -1.13
KHDC1-202ENST00000370384 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
KHDC1-202ENST00000370384 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.13
KHDC1-202ENST00000370384 A6NED7 52 aa7.94□□□□□ -1.14
KHDC1-202ENST00000370384 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
KHDC1-202ENST00000370384 KRTAP12-2P59991 146 aa7.9□□□□□ -1.14
KHDC1-202ENST00000370384 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
KHDC1-202ENST00000370384 MT1XP80297 61 aa7.85□□□□□ -1.15
KHDC1-202ENST00000370384 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
KHDC1-202ENST00000370384 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
KHDC1-202ENST00000370384 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
KHDC1-202ENST00000370384 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
KHDC1-202ENST00000370384 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
KHDC1-202ENST00000370384 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
KHDC1-202ENST00000370384 K7ERS5 55 aa7.65□□□□□ -1.18
KHDC1-202ENST00000370384 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
KHDC1-202ENST00000370384 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
KHDC1-202ENST00000370384 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
KHDC1-202ENST00000370384 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
KHDC1-202ENST00000370384 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
KHDC1-202ENST00000370384 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
KHDC1-202ENST00000370384 TNP1P09430 55 aa7.36□□□□□ -1.23
KHDC1-202ENST00000370384 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
KHDC1-202ENST00000370384 KMT2DO14686 5537 aa7.32□□□□□ -1.24
KHDC1-202ENST00000370384 ROMO1P60602 79 aa7.29□□□□□ -1.24
KHDC1-202ENST00000370384 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
KHDC1-202ENST00000370384 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
KHDC1-202ENST00000370384 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
KHDC1-202ENST00000370384 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
KHDC1-202ENST00000370384 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
KHDC1-202ENST00000370384 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
KHDC1-202ENST00000370384 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
KHDC1-202ENST00000370384 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
KHDC1-202ENST00000370384 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
KHDC1-202ENST00000370384 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
KHDC1-202ENST00000370384 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
KHDC1-202ENST00000370384 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
KHDC1-202ENST00000370384 MT1EP04732 61 aa6.91□□□□□ -1.3
KHDC1-202ENST00000370384 NEBP20929 6669 aa6.9□□□□□ -1.31
KHDC1-202ENST00000370384 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
KHDC1-202ENST00000370384 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
KHDC1-202ENST00000370384 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
KHDC1-202ENST00000370384 SPRR2EP22531 72 aa6.84□□□□□ -1.32
KHDC1-202ENST00000370384 SPRR2BP35325 72 aa6.84□□□□□ -1.32
KHDC1-202ENST00000370384 SPRR2AP35326 72 aa6.84□□□□□ -1.32
KHDC1-202ENST00000370384 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms