RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
PRPF38B-202ENST00000370022 MT1HP80294 61 aa7.83□□□□□ -1.16
PRPF38B-202ENST00000370022 Q5VV11 94 aa7.83□□□□□ -1.16
PRPF38B-202ENST00000370022 A6NN06 94 aa7.82□□□□□ -1.16
PRPF38B-202ENST00000370022 PSPHP1O15172 72 aa7.82□□□□□ -1.16
PRPF38B-202ENST00000370022 LOC101927531A0A1B0GV80 90 aa7.8□□□□□ -1.16
PRPF38B-202ENST00000370022 LCA10Q71F78 164 aa7.8□□□□□ -1.16
PRPF38B-202ENST00000370022 A8MUN3 132 aa7.79□□□□□ -1.16
PRPF38B-202ENST00000370022 H0Y9P7 68 aa7.79□□□□□ -1.16
PRPF38B-202ENST00000370022 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
PRPF38B-202ENST00000370022 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
PRPF38B-202ENST00000370022 MP68P56378 58 aa7.75□□□□□ -1.17
PRPF38B-202ENST00000370022 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
PRPF38B-202ENST00000370022 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
PRPF38B-202ENST00000370022 M0R2T5 61 aa7.73□□□□□ -1.17
PRPF38B-202ENST00000370022 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
PRPF38B-202ENST00000370022 H3BPC8 53 aa7.7□□□□□ -1.18
PRPF38B-202ENST00000370022 LINC00208Q96KT6 92 aa7.69□□□□□ -1.18
PRPF38B-202ENST00000370022 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
PRPF38B-202ENST00000370022 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
PRPF38B-202ENST00000370022 H3BS24 57 aa7.64□□□□□ -1.19
PRPF38B-202ENST00000370022 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
PRPF38B-202ENST00000370022 A6NED7 52 aa7.63□□□□□ -1.19
PRPF38B-202ENST00000370022 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
PRPF38B-202ENST00000370022 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
PRPF38B-202ENST00000370022 A8MU10 97 aa7.61□□□□□ -1.19
PRPF38B-202ENST00000370022 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
PRPF38B-202ENST00000370022 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
PRPF38B-202ENST00000370022 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
PRPF38B-202ENST00000370022 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
PRPF38B-202ENST00000370022 S4R3F8 94 aa7.5□□□□□ -1.21
PRPF38B-202ENST00000370022 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.21
PRPF38B-202ENST00000370022 COA5Q86WW8 74 aa7.46□□□□□ -1.22
PRPF38B-202ENST00000370022 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
PRPF38B-202ENST00000370022 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
PRPF38B-202ENST00000370022 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
PRPF38B-202ENST00000370022 MT2AP02795 61 aa7.39□□□□□ -1.23
PRPF38B-202ENST00000370022 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
PRPF38B-202ENST00000370022 MT1FP04733 61 aa7.33□□□□□ -1.24
PRPF38B-202ENST00000370022 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
PRPF38B-202ENST00000370022 ACYP2P14621 99 aa7.32□□□□□ -1.24
PRPF38B-202ENST00000370022 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
PRPF38B-202ENST00000370022 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
PRPF38B-202ENST00000370022 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.25
PRPF38B-202ENST00000370022 H0YAA0 97 aa7.2□□□□□ -1.26
PRPF38B-202ENST00000370022 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.27
PRPF38B-202ENST00000370022 CRIPTQ9P021 101 aa7.09□□□□□ -1.27
PRPF38B-202ENST00000370022 LCE2BO14633 110 aa7.08□□□□□ -1.28
PRPF38B-202ENST00000370022 UQCR11O14957 56 aa7.08□□□□□ -1.28
PRPF38B-202ENST00000370022 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
PRPF38B-202ENST00000370022 A0A1B0GU69 56 aa7.03□□□□□ -1.28
PRPF38B-202ENST00000370022 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
PRPF38B-202ENST00000370022 SPRR2GQ9BYE4 73 aa7.03□□□□□ -1.28
PRPF38B-202ENST00000370022 USH2AO75445 5202 aa7.02□□□□□ -1.29
PRPF38B-202ENST00000370022 ROMO1P60602 79 aa7.02□□□□□ -1.29
PRPF38B-202ENST00000370022 SSPOA2VEC9 5147 aa6.99□□□□□ -1.29
PRPF38B-202ENST00000370022 P0C880 135 aa6.96□□□□□ -1.29
PRPF38B-202ENST00000370022 KRTAP25-1Q3LHN0 102 aa6.93□□□□□ -1.3
PRPF38B-202ENST00000370022 R4GN34 69 aa6.91□□□□□ -1.3
PRPF38B-202ENST00000370022 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
PRPF38B-202ENST00000370022 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
PRPF38B-202ENST00000370022 M0QZ58 72 aa6.86□□□□□ -1.31
PRPF38B-202ENST00000370022 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
PRPF38B-202ENST00000370022 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
PRPF38B-202ENST00000370022 MT1BP07438 61 aa6.82□□□□□ -1.32
PRPF38B-202ENST00000370022 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
PRPF38B-202ENST00000370022 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
PRPF38B-202ENST00000370022 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
PRPF38B-202ENST00000370022 A0A1B0GU33 70 aa6.67□□□□□ -1.34
PRPF38B-202ENST00000370022 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.35
PRPF38B-202ENST00000370022 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
PRPF38B-202ENST00000370022 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
PRPF38B-202ENST00000370022 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
PRPF38B-202ENST00000370022 K7ERS5 55 aa6.59□□□□□ -1.35
PRPF38B-202ENST00000370022 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
PRPF38B-202ENST00000370022 MT1XP80297 61 aa6.5□□□□□ -1.37
PRPF38B-202ENST00000370022 A0A0D9SG42 100 aa6.49□□□□□ -1.37
PRPF38B-202ENST00000370022 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
PRPF38B-202ENST00000370022 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
PRPF38B-202ENST00000370022 NDUFAF8A1L188 74 aa6.44□□□□□ -1.38
PRPF38B-202ENST00000370022 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
PRPF38B-202ENST00000370022 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
PRPF38B-202ENST00000370022 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
PRPF38B-202ENST00000370022 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
PRPF38B-202ENST00000370022 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
PRPF38B-202ENST00000370022 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
PRPF38B-202ENST00000370022 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
PRPF38B-202ENST00000370022 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
PRPF38B-202ENST00000370022 NEBP20929 6669 aa6.2□□□□□ -1.42
PRPF38B-202ENST00000370022 KMT2DO14686 5537 aa6.1□□□□□ -1.43
PRPF38B-202ENST00000370022 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
PRPF38B-202ENST00000370022 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
PRPF38B-202ENST00000370022 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
PRPF38B-202ENST00000370022 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
PRPF38B-202ENST00000370022 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
PRPF38B-202ENST00000370022 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
PRPF38B-202ENST00000370022 TNP1P09430 55 aa6.02□□□□□ -1.45
PRPF38B-202ENST00000370022 MDN1Q9NU22 5596 aa6.01□□□□□ -1.45
PRPF38B-202ENST00000370022 KRTAP20-1Q3LI63 56 aa5.99□□□□□ -1.45
PRPF38B-202ENST00000370022 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms