RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PRO0628Q9UI54 55 aa9.08□□□□□ -0.96
UBE3D-203ENST00000369747 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
UBE3D-203ENST00000369747 MUC2Q02817 5179 aa9.05□□□□□ -0.96
UBE3D-203ENST00000369747 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
UBE3D-203ENST00000369747 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
UBE3D-203ENST00000369747 MUC17Q685J3 4493 aa9□□□□□ -0.97
UBE3D-203ENST00000369747 RNF213Q63HN8 5207 aa8.97□□□□□ -0.97
UBE3D-203ENST00000369747 A6NED7 52 aa8.94□□□□□ -0.98
UBE3D-203ENST00000369747 A8MU10 97 aa8.93□□□□□ -0.98
UBE3D-203ENST00000369747 KRTAP4-1Q9BYQ7 146 aa8.93□□□□□ -0.98
UBE3D-203ENST00000369747 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
UBE3D-203ENST00000369747 A0A1B0GU69 56 aa8.9□□□□□ -0.98
UBE3D-203ENST00000369747 LCA10Q71F78 164 aa8.89□□□□□ -0.99
UBE3D-203ENST00000369747 SPTSSBQ8NFR3 76 aa8.84□□□□□ -1
UBE3D-203ENST00000369747 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -1
UBE3D-203ENST00000369747 SEC61GP60059 68 aa8.71□□□□□ -1.02
UBE3D-203ENST00000369747 UQCR11O14957 56 aa8.69□□□□□ -1.02
UBE3D-203ENST00000369747 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
UBE3D-203ENST00000369747 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
UBE3D-203ENST00000369747 MIR22HGQ0VDD5 57 aa8.64□□□□□ -1.03
UBE3D-203ENST00000369747 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
UBE3D-203ENST00000369747 KRTAP19-2Q3LHN2 52 aa8.62□□□□□ -1.03
UBE3D-203ENST00000369747 S4R3F8 94 aa8.62□□□□□ -1.03
UBE3D-203ENST00000369747 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
UBE3D-203ENST00000369747 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
UBE3D-203ENST00000369747 A6NN06 94 aa8.55□□□□□ -1.04
UBE3D-203ENST00000369747 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
UBE3D-203ENST00000369747 A0A1B0GU33 70 aa8.53□□□□□ -1.04
UBE3D-203ENST00000369747 H0YAA0 97 aa8.5□□□□□ -1.05
UBE3D-203ENST00000369747 FLGP20930 4061 aaPredicted RBP8.47□□□□□ -1.05
UBE3D-203ENST00000369747 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.05
UBE3D-203ENST00000369747 MT1HP80294 61 aa8.38□□□□□ -1.07
UBE3D-203ENST00000369747 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
UBE3D-203ENST00000369747 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
UBE3D-203ENST00000369747 P0C880 135 aa8.34□□□□□ -1.07
UBE3D-203ENST00000369747 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
UBE3D-203ENST00000369747 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
UBE3D-203ENST00000369747 M0R2T5 61 aa8.27□□□□□ -1.09
UBE3D-203ENST00000369747 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
UBE3D-203ENST00000369747 A0A0D9SG42 100 aa8.15□□□□□ -1.1
UBE3D-203ENST00000369747 K7ERS5 55 aa8.11□□□□□ -1.11
UBE3D-203ENST00000369747 PRAC1Q96KF2 57 aa8.1□□□□□ -1.11
UBE3D-203ENST00000369747 LCE2BO14633 110 aa8.09□□□□□ -1.11
UBE3D-203ENST00000369747 M0QZ58 72 aa8.08□□□□□ -1.12
UBE3D-203ENST00000369747 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
UBE3D-203ENST00000369747 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
UBE3D-203ENST00000369747 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
UBE3D-203ENST00000369747 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
UBE3D-203ENST00000369747 MT2AP02795 61 aa7.97□□□□□ -1.13
UBE3D-203ENST00000369747 R4GN34 69 aa7.95□□□□□ -1.14
UBE3D-203ENST00000369747 MT1FP04733 61 aa7.93□□□□□ -1.14
UBE3D-203ENST00000369747 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
UBE3D-203ENST00000369747 KRTAP10-10P60014 251 aa7.9□□□□□ -1.15
UBE3D-203ENST00000369747 ROMO1P60602 79 aa7.9□□□□□ -1.15
UBE3D-203ENST00000369747 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
UBE3D-203ENST00000369747 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
UBE3D-203ENST00000369747 CRIPTQ9P021 101 aa7.76□□□□□ -1.17
UBE3D-203ENST00000369747 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
UBE3D-203ENST00000369747 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
UBE3D-203ENST00000369747 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
UBE3D-203ENST00000369747 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
UBE3D-203ENST00000369747 USH2AO75445 5202 aa7.56□□□□□ -1.2
UBE3D-203ENST00000369747 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
UBE3D-203ENST00000369747 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
UBE3D-203ENST00000369747 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
UBE3D-203ENST00000369747 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
UBE3D-203ENST00000369747 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
UBE3D-203ENST00000369747 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
UBE3D-203ENST00000369747 MT1BP07438 61 aa7.44□□□□□ -1.22
UBE3D-203ENST00000369747 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
UBE3D-203ENST00000369747 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
UBE3D-203ENST00000369747 TNP1P09430 55 aa7.18□□□□□ -1.26
UBE3D-203ENST00000369747 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
UBE3D-203ENST00000369747 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.27
UBE3D-203ENST00000369747 MT1XP80297 61 aa7.14□□□□□ -1.27
UBE3D-203ENST00000369747 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
UBE3D-203ENST00000369747 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
UBE3D-203ENST00000369747 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
UBE3D-203ENST00000369747 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
UBE3D-203ENST00000369747 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
UBE3D-203ENST00000369747 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
UBE3D-203ENST00000369747 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
UBE3D-203ENST00000369747 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
UBE3D-203ENST00000369747 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
UBE3D-203ENST00000369747 KMT2DO14686 5537 aa6.83□□□□□ -1.32
UBE3D-203ENST00000369747 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
UBE3D-203ENST00000369747 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
UBE3D-203ENST00000369747 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
UBE3D-203ENST00000369747 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
UBE3D-203ENST00000369747 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
UBE3D-203ENST00000369747 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
UBE3D-203ENST00000369747 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
UBE3D-203ENST00000369747 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
UBE3D-203ENST00000369747 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
UBE3D-203ENST00000369747 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
UBE3D-203ENST00000369747 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
UBE3D-203ENST00000369747 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
UBE3D-203ENST00000369747 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
UBE3D-203ENST00000369747 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
UBE3D-203ENST00000369747 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms