RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 HRES1P13985 223 aa7.43□□□□□ -1.22
HMGCS2-201ENST00000369406 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
HMGCS2-201ENST00000369406 COA5Q86WW8 74 aa7.42□□□□□ -1.22
HMGCS2-201ENST00000369406 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
HMGCS2-201ENST00000369406 SPINK7P58062 85 aa7.39□□□□□ -1.23
HMGCS2-201ENST00000369406 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
HMGCS2-201ENST00000369406 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
HMGCS2-201ENST00000369406 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
HMGCS2-201ENST00000369406 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
HMGCS2-201ENST00000369406 MUC2Q02817 5179 aa7.27□□□□□ -1.25
HMGCS2-201ENST00000369406 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
HMGCS2-201ENST00000369406 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
HMGCS2-201ENST00000369406 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.26
HMGCS2-201ENST00000369406 ADM2Q7Z4H4 148 aa7.19□□□□□ -1.26
HMGCS2-201ENST00000369406 ACYP2P14621 99 aa7.18□□□□□ -1.26
HMGCS2-201ENST00000369406 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
HMGCS2-201ENST00000369406 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
HMGCS2-201ENST00000369406 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
HMGCS2-201ENST00000369406 H3BS24 57 aa7.15□□□□□ -1.27
HMGCS2-201ENST00000369406 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
HMGCS2-201ENST00000369406 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
HMGCS2-201ENST00000369406 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
HMGCS2-201ENST00000369406 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
HMGCS2-201ENST00000369406 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
HMGCS2-201ENST00000369406 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
HMGCS2-201ENST00000369406 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
HMGCS2-201ENST00000369406 A0A1B0GU69 56 aa6.97□□□□□ -1.29
HMGCS2-201ENST00000369406 CSAG1Q6PB30 78 aa6.95□□□□□ -1.3
HMGCS2-201ENST00000369406 S4R3F8 94 aa6.95□□□□□ -1.3
HMGCS2-201ENST00000369406 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
HMGCS2-201ENST00000369406 UQCR11O14957 56 aa6.89□□□□□ -1.31
HMGCS2-201ENST00000369406 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
HMGCS2-201ENST00000369406 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
HMGCS2-201ENST00000369406 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
HMGCS2-201ENST00000369406 P0C880 135 aa6.71□□□□□ -1.33
HMGCS2-201ENST00000369406 ROMO1P60602 79 aa6.68□□□□□ -1.34
HMGCS2-201ENST00000369406 MT1HP80294 61 aa6.68□□□□□ -1.34
HMGCS2-201ENST00000369406 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
HMGCS2-201ENST00000369406 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
HMGCS2-201ENST00000369406 A0A1B0GU33 70 aa6.61□□□□□ -1.35
HMGCS2-201ENST00000369406 H0YAA0 97 aa6.6□□□□□ -1.35
HMGCS2-201ENST00000369406 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-201ENST00000369406 CRIPTQ9P021 101 aa6.52□□□□□ -1.36
HMGCS2-201ENST00000369406 M0R2T5 61 aa6.52□□□□□ -1.37
HMGCS2-201ENST00000369406 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
HMGCS2-201ENST00000369406 A0A0D9SG42 100 aa6.43□□□□□ -1.38
HMGCS2-201ENST00000369406 MT2AP02795 61 aa6.43□□□□□ -1.38
HMGCS2-201ENST00000369406 MT1FP04733 61 aa6.42□□□□□ -1.38
HMGCS2-201ENST00000369406 M0QZ58 72 aa6.41□□□□□ -1.38
HMGCS2-201ENST00000369406 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
HMGCS2-201ENST00000369406 R4GN34 69 aa6.37□□□□□ -1.39
HMGCS2-201ENST00000369406 K7ERS5 55 aa6.35□□□□□ -1.39
HMGCS2-201ENST00000369406 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
HMGCS2-201ENST00000369406 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
HMGCS2-201ENST00000369406 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
HMGCS2-201ENST00000369406 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
HMGCS2-201ENST00000369406 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
HMGCS2-201ENST00000369406 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
HMGCS2-201ENST00000369406 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
HMGCS2-201ENST00000369406 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
HMGCS2-201ENST00000369406 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
HMGCS2-201ENST00000369406 C10orf95Q9H7T3 257 aa6.2□□□□□ -1.42
HMGCS2-201ENST00000369406 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
HMGCS2-201ENST00000369406 USH2AO75445 5202 aa6.07□□□□□ -1.44
HMGCS2-201ENST00000369406 LCE2BO14633 110 aa6.07□□□□□ -1.44
HMGCS2-201ENST00000369406 MT1BP07438 61 aa6.07□□□□□ -1.44
HMGCS2-201ENST00000369406 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
HMGCS2-201ENST00000369406 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.45
HMGCS2-201ENST00000369406 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
HMGCS2-201ENST00000369406 SSPOA2VEC9 5147 aa5.91□□□□□ -1.46
HMGCS2-201ENST00000369406 MT1XP80297 61 aa5.88□□□□□ -1.47
HMGCS2-201ENST00000369406 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
HMGCS2-201ENST00000369406 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
HMGCS2-201ENST00000369406 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
HMGCS2-201ENST00000369406 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
HMGCS2-201ENST00000369406 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
HMGCS2-201ENST00000369406 TNP1P09430 55 aa5.66□□□□□ -1.5
HMGCS2-201ENST00000369406 KMT2DO14686 5537 aa5.65□□□□□ -1.51
HMGCS2-201ENST00000369406 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
HMGCS2-201ENST00000369406 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
HMGCS2-201ENST00000369406 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
HMGCS2-201ENST00000369406 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
HMGCS2-201ENST00000369406 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
HMGCS2-201ENST00000369406 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
HMGCS2-201ENST00000369406 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
HMGCS2-201ENST00000369406 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
HMGCS2-201ENST00000369406 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
HMGCS2-201ENST00000369406 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
HMGCS2-201ENST00000369406 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
HMGCS2-201ENST00000369406 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.56
HMGCS2-201ENST00000369406 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
HMGCS2-201ENST00000369406 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
HMGCS2-201ENST00000369406 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
HMGCS2-201ENST00000369406 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
HMGCS2-201ENST00000369406 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
HMGCS2-201ENST00000369406 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
HMGCS2-201ENST00000369406 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
HMGCS2-201ENST00000369406 MT1EP04732 61 aa5.13□□□□□ -1.59
HMGCS2-201ENST00000369406 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
HMGCS2-201ENST00000369406 MT1LQ93083 61 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms