RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MUC2Q02817 5179 aa11.85□□□□□ -0.51
SNX3-203ENST00000368979 S4R3F8 94 aa11.81□□□□□ -0.52
SNX3-203ENST00000368979 SMIM26A0A096LP01 95 aa11.8□□□□□ -0.52
SNX3-203ENST00000368979 LCA10Q71F78 164 aa11.8□□□□□ -0.52
SNX3-203ENST00000368979 KRTAP3-3Q9BYR6 98 aa11.76□□□□□ -0.53
SNX3-203ENST00000368979 SPTSSBQ8NFR3 76 aa11.72□□□□□ -0.53
SNX3-203ENST00000368979 LCE2CQ5TA81 110 aa11.68□□□□□ -0.54
SNX3-203ENST00000368979 Q1T7F1 81 aa11.62□□□□□ -0.55
SNX3-203ENST00000368979 LINC01558Q9Y6Z2 57 aa11.58□□□□□ -0.56
SNX3-203ENST00000368979 V9GYY9 64 aa11.57□□□□□ -0.56
SNX3-203ENST00000368979 CSAG1Q6PB30 78 aa11.55□□□□□ -0.56
SNX3-203ENST00000368979 KRTAP3-2Q9BYR7 98 aa11.51□□□□□ -0.57
SNX3-203ENST00000368979 FLGP20930 4061 aaPredicted RBP11.48□□□□□ -0.57
SNX3-203ENST00000368979 MT1HP80294 61 aa11.45□□□□□ -0.58
SNX3-203ENST00000368979 PRR15LQ9BU68 103 aa11.42□□□□□ -0.58
SNX3-203ENST00000368979 FAT4Q6V0I7 4981 aa11.42□□□□□ -0.58
SNX3-203ENST00000368979 A0A1B0GU69 56 aa11.41□□□□□ -0.58
SNX3-203ENST00000368979 LCE2AQ5TA79 106 aaPredicted RBP11.4□□□□□ -0.59
SNX3-203ENST00000368979 PSPHP1O15172 72 aa11.39□□□□□ -0.59
SNX3-203ENST00000368979 KRTAP9-2Q9BYQ4 174 aa11.37□□□□□ -0.59
SNX3-203ENST00000368979 SEC61GP60059 68 aa11.36□□□□□ -0.59
SNX3-203ENST00000368979 H0YAA0 97 aa11.33□□□□□ -0.6
SNX3-203ENST00000368979 Q5VV11 94 aa11.33□□□□□ -0.6
SNX3-203ENST00000368979 KRTAP10-6P60371 365 aaPredicted RBP11.28□□□□□ -0.6
SNX3-203ENST00000368979 ADM2Q7Z4H4 148 aa11.27□□□□□ -0.61
SNX3-203ENST00000368979 M0R2T5 61 aa11.26□□□□□ -0.61
SNX3-203ENST00000368979 P0C880 135 aa11.2□□□□□ -0.62
SNX3-203ENST00000368979 A0A1B0GU33 70 aa11.11□□□□□ -0.63
SNX3-203ENST00000368979 KRTAP9-6A0A140TA67 174 aa11.05□□□□□ -0.64
SNX3-203ENST00000368979 UQCR11O14957 56 aa11.04□□□□□ -0.64
SNX3-203ENST00000368979 A6NED7 52 aa11.04□□□□□ -0.64
SNX3-203ENST00000368979 KRTAP9-8Q9BYQ0 159 aa11.01□□□□□ -0.65
SNX3-203ENST00000368979 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
SNX3-203ENST00000368979 MT2AP02795 61 aa10.96□□□□□ -0.65
SNX3-203ENST00000368979 KRTAP13-4Q3LI77 160 aa10.95□□□□□ -0.66
SNX3-203ENST00000368979 SPATA8Q6RVD6 105 aa10.93□□□□□ -0.66
SNX3-203ENST00000368979 MIR22HGQ0VDD5 57 aa10.91□□□□□ -0.66
SNX3-203ENST00000368979 M0QZ58 72 aa10.9□□□□□ -0.66
SNX3-203ENST00000368979 MT1FP04733 61 aa10.89□□□□□ -0.67
SNX3-203ENST00000368979 R4GN34 69 aa10.87□□□□□ -0.67
SNX3-203ENST00000368979 CDC42SE1Q9NRR8 79 aa10.86□□□□□ -0.67
SNX3-203ENST00000368979 CRIPTQ9P021 101 aa10.86□□□□□ -0.67
SNX3-203ENST00000368979 KRTAP10-10P60014 251 aa10.83□□□□□ -0.68
SNX3-203ENST00000368979 BRK1Q8WUW1 75 aa10.83□□□□□ -0.68
SNX3-203ENST00000368979 A8MU10 97 aa10.79□□□□□ -0.68
SNX3-203ENST00000368979 FSIP2Q5CZC0 6907 aa10.77□□□□□ -0.69
SNX3-203ENST00000368979 A0A0D9SG42 100 aa10.68□□□□□ -0.7
SNX3-203ENST00000368979 SPRR2GQ9BYE4 73 aa10.68□□□□□ -0.7
SNX3-203ENST00000368979 CRCT1Q9UGL9 99 aa10.68□□□□□ -0.7
SNX3-203ENST00000368979 KRTAP19-1Q8IUB9 90 aa10.67□□□□□ -0.7
SNX3-203ENST00000368979 LINC01554Q52M75 96 aa10.63□□□□□ -0.71
SNX3-203ENST00000368979 KRTAP9-3Q9BYQ3 159 aa10.62□□□□□ -0.71
SNX3-203ENST00000368979 PRO0628Q9UI54 55 aa10.53□□□□□ -0.72
SNX3-203ENST00000368979 KRTAP12-1P59990 96 aa10.53□□□□□ -0.72
SNX3-203ENST00000368979 A6NN06 94 aa10.51□□□□□ -0.73
SNX3-203ENST00000368979 KRTAP12-2P59991 146 aa10.48□□□□□ -0.73
SNX3-203ENST00000368979 SPINT4Q6UDR6 99 aa10.45□□□□□ -0.74
SNX3-203ENST00000368979 KRTAP19-8Q3LI54 63 aa10.43□□□□□ -0.74
SNX3-203ENST00000368979 K7ERS5 55 aa10.41□□□□□ -0.74
SNX3-203ENST00000368979 LCE2BO14633 110 aa10.33□□□□□ -0.76
SNX3-203ENST00000368979 MT1BP07438 61 aa10.3□□□□□ -0.76
SNX3-203ENST00000368979 PLAC4Q8WY50 150 aa10.26□□□□□ -0.77
SNX3-203ENST00000368979 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
SNX3-203ENST00000368979 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
SNX3-203ENST00000368979 USH2AO75445 5202 aa10.01□□□□□ -0.81
SNX3-203ENST00000368979 ROMO1P60602 79 aa9.99□□□□□ -0.81
SNX3-203ENST00000368979 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.97□□□□□ -0.81
SNX3-203ENST00000368979 C10orf95Q9H7T3 257 aa9.97□□□□□ -0.81
SNX3-203ENST00000368979 SSPOA2VEC9 5147 aa9.95□□□□□ -0.82
SNX3-203ENST00000368979 MT1XP80297 61 aa9.93□□□□□ -0.82
SNX3-203ENST00000368979 KRTAP9-7A8MTY7 169 aa9.92□□□□□ -0.82
SNX3-203ENST00000368979 KRTAP10-5P60370 271 aa9.92□□□□□ -0.82
SNX3-203ENST00000368979 PRO2289Q9P1D8 64 aa9.81□□□□□ -0.84
SNX3-203ENST00000368979 FCGBPQ9Y6R7 5405 aaPredicted RBP9.79□□□□□ -0.84
SNX3-203ENST00000368979 KTN1-AS1Q86SY8 53 aa9.78□□□□□ -0.84
SNX3-203ENST00000368979 KRTAP19-6Q3LI70 58 aa9.74□□□□□ -0.85
SNX3-203ENST00000368979 KRTAP25-1Q3LHN0 102 aa9.67□□□□□ -0.86
SNX3-203ENST00000368979 TNP1P09430 55 aa9.66□□□□□ -0.86
SNX3-203ENST00000368979 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
SNX3-203ENST00000368979 MACF1Q9UPN3 7388 aaKnown RBP9.6□□□□□ -0.87
SNX3-203ENST00000368979 LOC100996750A0A140TA64 210 aa9.56□□□□□ -0.88
SNX3-203ENST00000368979 KRTAP4-6Q9BYQ5 205 aa9.56□□□□□ -0.88
SNX3-203ENST00000368979 SVIPQ8NHG7 77 aa9.55□□□□□ -0.88
SNX3-203ENST00000368979 SYNE2Q8WXH0 6885 aaKnown RBP9.54□□□□□ -0.88
SNX3-203ENST00000368979 KRTAP10-7P60409 375 aaPredicted RBP9.52□□□□□ -0.88
SNX3-203ENST00000368979 KRTAP10-12P60413 245 aa9.42□□□□□ -0.9
SNX3-203ENST00000368979 KRTAP23-1A1A580 65 aa9.36□□□□□ -0.91
SNX3-203ENST00000368979 PP632Q6XCG6 107 aa9.31□□□□□ -0.92
SNX3-203ENST00000368979 LCE3AQ5TA76 89 aa9.3□□□□□ -0.92
SNX3-203ENST00000368979 KRTAP6-3Q3LI67 103 aa9.2□□□□□ -0.94
SNX3-203ENST00000368979 KRTAP4-8A0A0G2JLE6 195 aa9.17□□□□□ -0.94
SNX3-203ENST00000368979 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
SNX3-203ENST00000368979 KRTAP8-1Q8IUC2 63 aa9.11□□□□□ -0.95
SNX3-203ENST00000368979 KMT2DO14686 5537 aa9.04□□□□□ -0.96
SNX3-203ENST00000368979 NEBP20929 6669 aa8.95□□□□□ -0.98
SNX3-203ENST00000368979 KRTAP19-5Q3LI72 72 aa8.93□□□□□ -0.98
SNX3-203ENST00000368979 KRTAP12-3P60328 96 aa8.92□□□□□ -0.98
SNX3-203ENST00000368979 KRTAP19-7Q3SYF9 63 aa8.87□□□□□ -0.99
SNX3-203ENST00000368979 MUC12Q9UKN1 5478 aa8.85□□□□□ -0.99
SNX3-203ENST00000368979 MT1EP04732 61 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms