RNA–Protein interactions for RNA: ENST00000368892.8

VPS72-202, Transcript of vacuolar protein sorting 72 homolog, humanhuman

APPRIS P1 TSL 1 (best)

Gene VPS72, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-202ENST00000368892 LCA10Q71F78 164 aa9.92□□□□□ -0.82
VPS72-202ENST00000368892 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
VPS72-202ENST00000368892 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
VPS72-202ENST00000368892 ACYP2P14621 99 aa9.87□□□□□ -0.83
VPS72-202ENST00000368892 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
VPS72-202ENST00000368892 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
VPS72-202ENST00000368892 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.84
VPS72-202ENST00000368892 TMEM258P61165 79 aa9.7□□□□□ -0.86
VPS72-202ENST00000368892 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
VPS72-202ENST00000368892 MT2AP02795 61 aa9.67□□□□□ -0.86
VPS72-202ENST00000368892 COA5Q86WW8 74 aa9.66□□□□□ -0.86
VPS72-202ENST00000368892 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
VPS72-202ENST00000368892 MT1FP04733 61 aa9.61□□□□□ -0.87
VPS72-202ENST00000368892 H0YAA0 97 aa9.6□□□□□ -0.87
VPS72-202ENST00000368892 SPTSSBQ8NFR3 76 aa9.6□□□□□ -0.87
VPS72-202ENST00000368892 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
VPS72-202ENST00000368892 KRTAP10-10P60014 251 aa9.53□□□□□ -0.88
VPS72-202ENST00000368892 KRTAP9-3Q9BYQ3 159 aa9.45□□□□□ -0.9
VPS72-202ENST00000368892 ADM2Q7Z4H4 148 aa9.44□□□□□ -0.9
VPS72-202ENST00000368892 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
VPS72-202ENST00000368892 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
VPS72-202ENST00000368892 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
VPS72-202ENST00000368892 P0C880 135 aa9.36□□□□□ -0.91
VPS72-202ENST00000368892 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
VPS72-202ENST00000368892 CRIPTQ9P021 101 aa9.33□□□□□ -0.92
VPS72-202ENST00000368892 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
VPS72-202ENST00000368892 SPRR2GQ9BYE4 73 aa9.28□□□□□ -0.92
VPS72-202ENST00000368892 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
VPS72-202ENST00000368892 LCE2BO14633 110 aa9.24□□□□□ -0.93
VPS72-202ENST00000368892 SEC61GP60059 68 aa9.2□□□□□ -0.94
VPS72-202ENST00000368892 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
VPS72-202ENST00000368892 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
VPS72-202ENST00000368892 USH2AO75445 5202 aa9.16□□□□□ -0.94
VPS72-202ENST00000368892 R4GN34 69 aa9.14□□□□□ -0.95
VPS72-202ENST00000368892 A0A1B0GU69 56 aa9.13□□□□□ -0.95
VPS72-202ENST00000368892 KRTAP19-8Q3LI54 63 aa9.11□□□□□ -0.95
VPS72-202ENST00000368892 M0QZ58 72 aa9.09□□□□□ -0.95
VPS72-202ENST00000368892 Q1T7F1 81 aa9.04□□□□□ -0.96
VPS72-202ENST00000368892 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
VPS72-202ENST00000368892 A0A1B0GU33 70 aa9.02□□□□□ -0.97
VPS72-202ENST00000368892 KRTAP13-4Q3LI77 160 aa9.02□□□□□ -0.97
VPS72-202ENST00000368892 MT1BP07438 61 aa9.01□□□□□ -0.97
VPS72-202ENST00000368892 V9GYY9 64 aa9.01□□□□□ -0.97
VPS72-202ENST00000368892 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
VPS72-202ENST00000368892 Q5VV11 94 aa9□□□□□ -0.97
VPS72-202ENST00000368892 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
VPS72-202ENST00000368892 LINC01554Q52M75 96 aa8.89□□□□□ -0.99
VPS72-202ENST00000368892 SPATA8Q6RVD6 105 aa8.89□□□□□ -0.99
VPS72-202ENST00000368892 A6NN06 94 aa8.85□□□□□ -0.99
VPS72-202ENST00000368892 CRCT1Q9UGL9 99 aa8.85□□□□□ -0.99
VPS72-202ENST00000368892 PSPHP1O15172 72 aa8.84□□□□□ -0.99
VPS72-202ENST00000368892 KRTAP19-6Q3LI70 58 aa8.81□□□□□ -1
VPS72-202ENST00000368892 PRO0628Q9UI54 55 aa8.81□□□□□ -1
VPS72-202ENST00000368892 UQCR11O14957 56 aa8.8□□□□□ -1
VPS72-202ENST00000368892 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
VPS72-202ENST00000368892 A0A0D9SG42 100 aa8.73□□□□□ -1.01
VPS72-202ENST00000368892 KRTAP9-6A0A140TA67 174 aa8.71□□□□□ -1.01
VPS72-202ENST00000368892 A8MU10 97 aa8.7□□□□□ -1.02
VPS72-202ENST00000368892 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
VPS72-202ENST00000368892 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
VPS72-202ENST00000368892 KRTAP10-5P60370 271 aa8.65□□□□□ -1.02
VPS72-202ENST00000368892 MIR22HGQ0VDD5 57 aa8.64□□□□□ -1.03
VPS72-202ENST00000368892 FCGBPQ9Y6R7 5405 aaPredicted RBP8.64□□□□□ -1.03
VPS72-202ENST00000368892 MT1XP80297 61 aa8.6□□□□□ -1.03
VPS72-202ENST00000368892 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
VPS72-202ENST00000368892 A6NED7 52 aa8.56□□□□□ -1.04
VPS72-202ENST00000368892 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
VPS72-202ENST00000368892 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
VPS72-202ENST00000368892 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
VPS72-202ENST00000368892 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
VPS72-202ENST00000368892 K7ERS5 55 aa8.3□□□□□ -1.08
VPS72-202ENST00000368892 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
VPS72-202ENST00000368892 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
VPS72-202ENST00000368892 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
VPS72-202ENST00000368892 C10orf95Q9H7T3 257 aa8.22□□□□□ -1.09
VPS72-202ENST00000368892 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
VPS72-202ENST00000368892 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
VPS72-202ENST00000368892 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
VPS72-202ENST00000368892 KMT2DO14686 5537 aa8.05□□□□□ -1.12
VPS72-202ENST00000368892 SYNE2Q8WXH0 6885 aaKnown RBP8.03□□□□□ -1.12
VPS72-202ENST00000368892 TNP1P09430 55 aa8.02□□□□□ -1.13
VPS72-202ENST00000368892 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
VPS72-202ENST00000368892 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
VPS72-202ENST00000368892 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
VPS72-202ENST00000368892 KRTAP6-3Q3LI67 103 aa7.93□□□□□ -1.14
VPS72-202ENST00000368892 ROMO1P60602 79 aa7.92□□□□□ -1.14
VPS72-202ENST00000368892 KRTAP9-7A8MTY7 169 aa7.91□□□□□ -1.14
VPS72-202ENST00000368892 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
VPS72-202ENST00000368892 KRTAP5-9P26371 169 aa7.88□□□□□ -1.15
VPS72-202ENST00000368892 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
VPS72-202ENST00000368892 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
VPS72-202ENST00000368892 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
VPS72-202ENST00000368892 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
VPS72-202ENST00000368892 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
VPS72-202ENST00000368892 KRTAP19-5Q3LI72 72 aa7.63□□□□□ -1.19
VPS72-202ENST00000368892 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
VPS72-202ENST00000368892 MT1EP04732 61 aa7.57□□□□□ -1.2
VPS72-202ENST00000368892 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
VPS72-202ENST00000368892 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
VPS72-202ENST00000368892 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms