RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 SPINK1P00995 79 aa14.7□□□□□ -0.06
EFNA1-202ENST00000368407 RPS29P62273 56 aaKnown RBP14.6□□□□□ -0.07
EFNA1-202ENST00000368407 HERC1Q15751 4861 aa14.47□□□□□ -0.09
EFNA1-202ENST00000368407 PRAC1Q96KF2 57 aa14.47□□□□□ -0.09
EFNA1-202ENST00000368407 ADM2Q7Z4H4 148 aa14.39□□□□□ -0.11
EFNA1-202ENST00000368407 LINC01554Q52M75 96 aa14.35□□□□□ -0.11
EFNA1-202ENST00000368407 C20orf166-AS1Q96NR2 134 aa14.24□□□□□ -0.13
EFNA1-202ENST00000368407 A8MUU9 505 aa14.23□□□□□ -0.13
EFNA1-202ENST00000368407 HMCN2Q8NDA2 5059 aa14.17□□□□□ -0.14
EFNA1-202ENST00000368407 LPAP08519 4548 aa14.14□□□□□ -0.15
EFNA1-202ENST00000368407 C9orf92A6NGG3 77 aa14.11□□□□□ -0.15
EFNA1-202ENST00000368407 H0YAA0 97 aa14.11□□□□□ -0.15
EFNA1-202ENST00000368407 CSAG1Q6PB30 78 aa14.1□□□□□ -0.15
EFNA1-202ENST00000368407 A0A1B0GU33 70 aa14.03□□□□□ -0.16
EFNA1-202ENST00000368407 TPRXLQ17RH7 258 aa14.03□□□□□ -0.16
EFNA1-202ENST00000368407 KRTAP3-1Q9BYR8 98 aa14.02□□□□□ -0.16
EFNA1-202ENST00000368407 H1FX-AS1Q4G0G2 97 aa14.02□□□□□ -0.17
EFNA1-202ENST00000368407 LRP2P98164 4655 aa13.98□□□□□ -0.17
EFNA1-202ENST00000368407 XP32Q5T750 250 aa13.92□□□□□ -0.18
EFNA1-202ENST00000368407 COX6B2Q6YFQ2 88 aa13.86□□□□□ -0.19
EFNA1-202ENST00000368407 KRTAP25-1Q3LHN0 102 aa13.84□□□□□ -0.19
EFNA1-202ENST00000368407 K7ERS5 55 aa13.78□□□□□ -0.2
EFNA1-202ENST00000368407 RPL37P61927 97 aaKnown RBP13.73□□□□□ -0.21
EFNA1-202ENST00000368407 UBR4Q5T4S7 5183 aa13.64□□□□□ -0.23
EFNA1-202ENST00000368407 MUC17Q685J3 4493 aa13.6□□□□□ -0.23
EFNA1-202ENST00000368407 SEC61BP60468 96 aaKnown RBP13.54□□□□□ -0.24
EFNA1-202ENST00000368407 KRTAP10-6P60371 365 aaPredicted RBP13.47□□□□□ -0.25
EFNA1-202ENST00000368407 ROMO1P60602 79 aa13.47□□□□□ -0.25
EFNA1-202ENST00000368407 KRTAP3-3Q9BYR6 98 aa13.45□□□□□ -0.26
EFNA1-202ENST00000368407 MUC2Q02817 5179 aa13.43□□□□□ -0.26
EFNA1-202ENST00000368407 RNF213Q63HN8 5207 aa13.4□□□□□ -0.26
EFNA1-202ENST00000368407 KRTAP4-1Q9BYQ7 146 aa13.4□□□□□ -0.26
EFNA1-202ENST00000368407 KRTAP3-2Q9BYR7 98 aa13.35□□□□□ -0.27
EFNA1-202ENST00000368407 H3BS24 57 aa13.31□□□□□ -0.28
EFNA1-202ENST00000368407 S4R3F8 94 aa13.31□□□□□ -0.28
EFNA1-202ENST00000368407 KRTAP13-4Q3LI77 160 aa13.26□□□□□ -0.29
EFNA1-202ENST00000368407 CRIPTQ9P021 101 aa13.13□□□□□ -0.31
EFNA1-202ENST00000368407 A0A0D9SG42 100 aa13.07□□□□□ -0.32
EFNA1-202ENST00000368407 P0C880 135 aa13.03□□□□□ -0.32
EFNA1-202ENST00000368407 KRTAP19-2Q3LHN2 52 aa12.94□□□□□ -0.34
EFNA1-202ENST00000368407 FAT4Q6V0I7 4981 aa12.9□□□□□ -0.35
EFNA1-202ENST00000368407 M0QZ58 72 aa12.89□□□□□ -0.35
EFNA1-202ENST00000368407 KRTAP12-2P59991 146 aa12.88□□□□□ -0.35
EFNA1-202ENST00000368407 KRTAP12-1P59990 96 aa12.87□□□□□ -0.35
EFNA1-202ENST00000368407 LCE2CQ5TA81 110 aa12.82□□□□□ -0.36
EFNA1-202ENST00000368407 SPINT4Q6UDR6 99 aa12.82□□□□□ -0.36
EFNA1-202ENST00000368407 C10orf95Q9H7T3 257 aa12.74□□□□□ -0.37
EFNA1-202ENST00000368407 FLGP20930 4061 aaPredicted RBP12.72□□□□□ -0.37
EFNA1-202ENST00000368407 KRTAP15-1Q3LI76 137 aa12.69□□□□□ -0.38
EFNA1-202ENST00000368407 MT1HP80294 61 aa12.58□□□□□ -0.39
EFNA1-202ENST00000368407 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
EFNA1-202ENST00000368407 M0R2T5 61 aa12.41□□□□□ -0.42
EFNA1-202ENST00000368407 NDUFAF8A1L188 74 aa12.31□□□□□ -0.44
EFNA1-202ENST00000368407 R4GN34 69 aa12.31□□□□□ -0.44
EFNA1-202ENST00000368407 LORP23490 312 aaPredicted RBP12.14□□□□□ -0.47
EFNA1-202ENST00000368407 KRTAP9-8Q9BYQ0 159 aa12.05□□□□□ -0.48
EFNA1-202ENST00000368407 PP632Q6XCG6 107 aa11.99□□□□□ -0.49
EFNA1-202ENST00000368407 MT2AP02795 61 aa11.98□□□□□ -0.49
EFNA1-202ENST00000368407 PLAC4Q8WY50 150 aa11.96□□□□□ -0.5
EFNA1-202ENST00000368407 MT1FP04733 61 aa11.92□□□□□ -0.5
EFNA1-202ENST00000368407 KRTAP10-10P60014 251 aa11.85□□□□□ -0.51
EFNA1-202ENST00000368407 CAMK2N1Q7Z7J9 78 aa11.69□□□□□ -0.54
EFNA1-202ENST00000368407 KRTAP23-1A1A580 65 aa11.66□□□□□ -0.54
EFNA1-202ENST00000368407 KRTAP9-3Q9BYQ3 159 aa11.64□□□□□ -0.55
EFNA1-202ENST00000368407 LUZP6Q538Z0 58 aa11.52□□□□□ -0.57
EFNA1-202ENST00000368407 KRTAP19-1Q8IUB9 90 aa11.52□□□□□ -0.57
EFNA1-202ENST00000368407 SPRR2GQ9BYE4 73 aa11.46□□□□□ -0.58
EFNA1-202ENST00000368407 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
EFNA1-202ENST00000368407 TNP1P09430 55 aa11.43□□□□□ -0.58
EFNA1-202ENST00000368407 LCE2BO14633 110 aa11.41□□□□□ -0.58
EFNA1-202ENST00000368407 USH2AO75445 5202 aa11.32□□□□□ -0.6
EFNA1-202ENST00000368407 KRTAP9-2Q9BYQ4 174 aa11.29□□□□□ -0.6
EFNA1-202ENST00000368407 SPRR5A0A1B0GTR4 108 aa11.29□□□□□ -0.6
EFNA1-202ENST00000368407 FSIP2Q5CZC0 6907 aa11.25□□□□□ -0.61
EFNA1-202ENST00000368407 KRTAP19-8Q3LI54 63 aa11.23□□□□□ -0.61
EFNA1-202ENST00000368407 A0A0A0MQY5 61 aa11.2□□□□□ -0.62
EFNA1-202ENST00000368407 MT1BP07438 61 aa11.16□□□□□ -0.62
EFNA1-202ENST00000368407 SSPOA2VEC9 5147 aa11.05□□□□□ -0.64
EFNA1-202ENST00000368407 CRCT1Q9UGL9 99 aa10.8□□□□□ -0.68
EFNA1-202ENST00000368407 KRTAP19-6Q3LI70 58 aa10.78□□□□□ -0.68
EFNA1-202ENST00000368407 MT1XP80297 61 aa10.69□□□□□ -0.7
EFNA1-202ENST00000368407 KRTAP10-5P60370 271 aa10.66□□□□□ -0.7
EFNA1-202ENST00000368407 LCE3AQ5TA76 89 aa10.65□□□□□ -0.7
EFNA1-202ENST00000368407 FCGBPQ9Y6R7 5405 aaPredicted RBP10.64□□□□□ -0.71
EFNA1-202ENST00000368407 KRTAP8-1Q8IUC2 63 aa10.6□□□□□ -0.71
EFNA1-202ENST00000368407 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.72
EFNA1-202ENST00000368407 PRO2289Q9P1D8 64 aa10.56□□□□□ -0.72
EFNA1-202ENST00000368407 KRTAP10-7P60409 375 aaPredicted RBP10.26□□□□□ -0.77
EFNA1-202ENST00000368407 INE1O15225 51 aa10.24□□□□□ -0.77
EFNA1-202ENST00000368407 MACF1Q9UPN3 7388 aaKnown RBP10.22□□□□□ -0.77
EFNA1-202ENST00000368407 KRTAP12-3P60328 96 aa10.21□□□□□ -0.78
EFNA1-202ENST00000368407 KRTAP10-12P60413 245 aa10.21□□□□□ -0.78
EFNA1-202ENST00000368407 KMT2DO14686 5537 aa10.15□□□□□ -0.78
EFNA1-202ENST00000368407 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.03□□□□□ -0.8
EFNA1-202ENST00000368407 SYNE2Q8WXH0 6885 aaKnown RBP10.01□□□□□ -0.81
EFNA1-202ENST00000368407 KRTAP4-8A0A0G2JLE6 195 aa10□□□□□ -0.81
EFNA1-202ENST00000368407 KRTAP4-8Q9BYQ9 185 aa10□□□□□ -0.81
EFNA1-202ENST00000368407 LCE3CQ5T5A8 94 aa9.65□□□□□ -0.86
EFNA1-202ENST00000368407 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
EFNA1-202ENST00000368407 KRTAP6-3Q3LI67 103 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms