RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 LCA10Q71F78 164 aa6.13□□□□□ -1.43
EFNA1-201ENST00000368406 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
EFNA1-201ENST00000368406 NDUFC1O43677 76 aa6.12□□□□□ -1.43
EFNA1-201ENST00000368406 SPANXA2-OT1Q8N9U9 137 aa6.09□□□□□ -1.43
EFNA1-201ENST00000368406 CCDC179H3BU77 68 aa6.08□□□□□ -1.44
EFNA1-201ENST00000368406 ACYP2P14621 99 aa6.08□□□□□ -1.44
EFNA1-201ENST00000368406 CSAG1Q6PB30 78 aa6.08□□□□□ -1.44
EFNA1-201ENST00000368406 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
EFNA1-201ENST00000368406 CHKB-CPT1BH3BT56 60 aa6.05□□□□□ -1.44
EFNA1-201ENST00000368406 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
EFNA1-201ENST00000368406 H7BZZ5 65 aa6.04□□□□□ -1.44
EFNA1-201ENST00000368406 MT2AP02795 61 aa6.04□□□□□ -1.44
EFNA1-201ENST00000368406 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
EFNA1-201ENST00000368406 MT1FP04733 61 aa5.99□□□□□ -1.45
EFNA1-201ENST00000368406 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
EFNA1-201ENST00000368406 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
EFNA1-201ENST00000368406 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
EFNA1-201ENST00000368406 COA5Q86WW8 74 aa5.94□□□□□ -1.46
EFNA1-201ENST00000368406 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
EFNA1-201ENST00000368406 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
EFNA1-201ENST00000368406 TMEM258P61165 79 aa5.91□□□□□ -1.46
EFNA1-201ENST00000368406 PCP4P48539 62 aa5.87□□□□□ -1.47
EFNA1-201ENST00000368406 ADM2Q7Z4H4 148 aa5.87□□□□□ -1.47
EFNA1-201ENST00000368406 H0YAA0 97 aa5.86□□□□□ -1.47
EFNA1-201ENST00000368406 USH2AO75445 5202 aa5.85□□□□□ -1.47
EFNA1-201ENST00000368406 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
EFNA1-201ENST00000368406 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
EFNA1-201ENST00000368406 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
EFNA1-201ENST00000368406 SEC61GP60059 68 aa5.76□□□□□ -1.49
EFNA1-201ENST00000368406 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
EFNA1-201ENST00000368406 P0C880 135 aa5.74□□□□□ -1.49
EFNA1-201ENST00000368406 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
EFNA1-201ENST00000368406 R4GN34 69 aa5.72□□□□□ -1.49
EFNA1-201ENST00000368406 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
EFNA1-201ENST00000368406 M0QZ58 72 aa5.68□□□□□ -1.5
EFNA1-201ENST00000368406 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
EFNA1-201ENST00000368406 A0A1B0GU69 56 aa5.66□□□□□ -1.5
EFNA1-201ENST00000368406 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
EFNA1-201ENST00000368406 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
EFNA1-201ENST00000368406 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
EFNA1-201ENST00000368406 Q5VV11 94 aa5.62□□□□□ -1.51
EFNA1-201ENST00000368406 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
EFNA1-201ENST00000368406 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
EFNA1-201ENST00000368406 A0A1B0GU33 70 aa5.57□□□□□ -1.52
EFNA1-201ENST00000368406 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
EFNA1-201ENST00000368406 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
EFNA1-201ENST00000368406 MT1BP07438 61 aa5.55□□□□□ -1.52
EFNA1-201ENST00000368406 V9GYY9 64 aa5.53□□□□□ -1.52
EFNA1-201ENST00000368406 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
EFNA1-201ENST00000368406 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
EFNA1-201ENST00000368406 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
EFNA1-201ENST00000368406 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
EFNA1-201ENST00000368406 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
EFNA1-201ENST00000368406 A0A0D9SG42 100 aa5.47□□□□□ -1.53
EFNA1-201ENST00000368406 Q1T7F1 81 aa5.46□□□□□ -1.54
EFNA1-201ENST00000368406 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
EFNA1-201ENST00000368406 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
EFNA1-201ENST00000368406 PSPHP1O15172 72 aa5.44□□□□□ -1.54
EFNA1-201ENST00000368406 A6NN06 94 aa5.43□□□□□ -1.54
EFNA1-201ENST00000368406 UQCR11O14957 56 aa5.4□□□□□ -1.54
EFNA1-201ENST00000368406 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
EFNA1-201ENST00000368406 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
EFNA1-201ENST00000368406 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
EFNA1-201ENST00000368406 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
EFNA1-201ENST00000368406 A8MU10 97 aa5.35□□□□□ -1.55
EFNA1-201ENST00000368406 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
EFNA1-201ENST00000368406 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
EFNA1-201ENST00000368406 A6NED7 52 aa5.31□□□□□ -1.56
EFNA1-201ENST00000368406 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
EFNA1-201ENST00000368406 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
EFNA1-201ENST00000368406 MT1XP80297 61 aa5.27□□□□□ -1.57
EFNA1-201ENST00000368406 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
EFNA1-201ENST00000368406 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
EFNA1-201ENST00000368406 K7ERS5 55 aa5.21□□□□□ -1.58
EFNA1-201ENST00000368406 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
EFNA1-201ENST00000368406 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
EFNA1-201ENST00000368406 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
EFNA1-201ENST00000368406 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
EFNA1-201ENST00000368406 KMT2DO14686 5537 aa5.04□□□□□ -1.6
EFNA1-201ENST00000368406 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
EFNA1-201ENST00000368406 NEBP20929 6669 aa5.01□□□□□ -1.61
EFNA1-201ENST00000368406 KRTAP10-12P60413 245 aa5□□□□□ -1.61
EFNA1-201ENST00000368406 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
EFNA1-201ENST00000368406 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
EFNA1-201ENST00000368406 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
EFNA1-201ENST00000368406 TNP1P09430 55 aa4.98□□□□□ -1.61
EFNA1-201ENST00000368406 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
EFNA1-201ENST00000368406 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
EFNA1-201ENST00000368406 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
EFNA1-201ENST00000368406 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
EFNA1-201ENST00000368406 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
EFNA1-201ENST00000368406 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
EFNA1-201ENST00000368406 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
EFNA1-201ENST00000368406 ROMO1P60602 79 aa4.87□□□□□ -1.63
EFNA1-201ENST00000368406 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
EFNA1-201ENST00000368406 SPRR2EP22531 72 aa4.84□□□□□ -1.63
EFNA1-201ENST00000368406 SPRR2BP35325 72 aa4.84□□□□□ -1.63
EFNA1-201ENST00000368406 SPRR2AP35326 72 aa4.84□□□□□ -1.63
EFNA1-201ENST00000368406 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
EFNA1-201ENST00000368406 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms