RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 HERC2O95714 4834 aa12.81□□□□□ -0.36
CLK2-203ENST00000368361 BIRC6Q9NR09 4857 aa12.77□□□□□ -0.37
CLK2-203ENST00000368361 J3QL48 77 aa12.71□□□□□ -0.37
CLK2-203ENST00000368361 SEC61GP60059 68 aa12.69□□□□□ -0.38
CLK2-203ENST00000368361 UQCR11O14957 56 aa12.64□□□□□ -0.39
CLK2-203ENST00000368361 KRTAP3-3Q9BYR6 98 aa12.59□□□□□ -0.39
CLK2-203ENST00000368361 SPATA8Q6RVD6 105 aa12.57□□□□□ -0.4
CLK2-203ENST00000368361 MIR22HGQ0VDD5 57 aa12.56□□□□□ -0.4
CLK2-203ENST00000368361 PMAIP1Q13794 54 aa12.55□□□□□ -0.4
CLK2-203ENST00000368361 S4R3F8 94 aa12.54□□□□□ -0.4
CLK2-203ENST00000368361 H1FX-AS1Q4G0G2 97 aa12.49□□□□□ -0.41
CLK2-203ENST00000368361 RBM12B-AS1Q9P1G2 102 aa12.45□□□□□ -0.42
CLK2-203ENST00000368361 SEC61BP60468 96 aaKnown RBP12.43□□□□□ -0.42
CLK2-203ENST00000368361 A0A1B0GU33 70 aa12.41□□□□□ -0.42
CLK2-203ENST00000368361 A6NN06 94 aa12.39□□□□□ -0.43
CLK2-203ENST00000368361 H0YAA0 97 aa12.36□□□□□ -0.43
CLK2-203ENST00000368361 MUC17Q685J3 4493 aa12.36□□□□□ -0.43
CLK2-203ENST00000368361 PCLOQ9Y6V0 5065 aa12.32□□□□□ -0.44
CLK2-203ENST00000368361 KRTAP10-6P60371 365 aaPredicted RBP12.29□□□□□ -0.44
CLK2-203ENST00000368361 KRTAP4-1Q9BYQ7 146 aa12.29□□□□□ -0.44
CLK2-203ENST00000368361 KRTAP3-2Q9BYR7 98 aa12.25□□□□□ -0.45
CLK2-203ENST00000368361 HERC1Q15751 4861 aa12.21□□□□□ -0.45
CLK2-203ENST00000368361 CSAG1Q6PB30 78 aa12.17□□□□□ -0.46
CLK2-203ENST00000368361 KTN1-AS1Q86SY8 53 aa12.15□□□□□ -0.47
CLK2-203ENST00000368361 P0C880 135 aa12.14□□□□□ -0.47
CLK2-203ENST00000368361 ADM2Q7Z4H4 148 aa12.09□□□□□ -0.47
CLK2-203ENST00000368361 KRTAP13-4Q3LI77 160 aa12.08□□□□□ -0.48
CLK2-203ENST00000368361 HMCN2Q8NDA2 5059 aa12.07□□□□□ -0.48
CLK2-203ENST00000368361 MUC2Q02817 5179 aa12.05□□□□□ -0.48
CLK2-203ENST00000368361 KRTAP19-2Q3LHN2 52 aa12.01□□□□□ -0.49
CLK2-203ENST00000368361 A0A0D9SG42 100 aa11.9□□□□□ -0.5
CLK2-203ENST00000368361 K7ERS5 55 aa11.82□□□□□ -0.52
CLK2-203ENST00000368361 PRAC1Q96KF2 57 aa11.78□□□□□ -0.52
CLK2-203ENST00000368361 M0QZ58 72 aa11.74□□□□□ -0.53
CLK2-203ENST00000368361 FLGP20930 4061 aaPredicted RBP11.72□□□□□ -0.53
CLK2-203ENST00000368361 KRTAP12-2P59991 146 aa11.63□□□□□ -0.55
CLK2-203ENST00000368361 LORP23490 312 aaPredicted RBP11.61□□□□□ -0.55
CLK2-203ENST00000368361 R4GN34 69 aa11.61□□□□□ -0.55
CLK2-203ENST00000368361 KRTAP12-1P59990 96 aa11.58□□□□□ -0.56
CLK2-203ENST00000368361 SPINT4Q6UDR6 99 aa11.55□□□□□ -0.56
CLK2-203ENST00000368361 UBR4Q5T4S7 5183 aa11.55□□□□□ -0.56
CLK2-203ENST00000368361 LCE2CQ5TA81 110 aa11.51□□□□□ -0.57
CLK2-203ENST00000368361 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
CLK2-203ENST00000368361 FAT4Q6V0I7 4981 aa11.5□□□□□ -0.57
CLK2-203ENST00000368361 RNF213Q63HN8 5207 aa11.48□□□□□ -0.57
CLK2-203ENST00000368361 ROMO1P60602 79 aa11.47□□□□□ -0.57
CLK2-203ENST00000368361 CRIPTQ9P021 101 aa11.32□□□□□ -0.6
CLK2-203ENST00000368361 KRTAP25-1Q3LHN0 102 aa11.29□□□□□ -0.6
CLK2-203ENST00000368361 MT1HP80294 61 aa11.25□□□□□ -0.61
CLK2-203ENST00000368361 M0R2T5 61 aa11.2□□□□□ -0.62
CLK2-203ENST00000368361 C10orf95Q9H7T3 257 aa11.04□□□□□ -0.64
CLK2-203ENST00000368361 CAMK2N1Q7Z7J9 78 aa10.93□□□□□ -0.66
CLK2-203ENST00000368361 MT2AP02795 61 aa10.92□□□□□ -0.66
CLK2-203ENST00000368361 SPRR2GQ9BYE4 73 aa10.92□□□□□ -0.66
CLK2-203ENST00000368361 KRTAP9-8Q9BYQ0 159 aa10.9□□□□□ -0.66
CLK2-203ENST00000368361 MT1FP04733 61 aa10.9□□□□□ -0.66
CLK2-203ENST00000368361 KRTAP19-1Q8IUB9 90 aa10.89□□□□□ -0.67
CLK2-203ENST00000368361 KRTAP10-10P60014 251 aa10.86□□□□□ -0.67
CLK2-203ENST00000368361 PLAC4Q8WY50 150 aa10.66□□□□□ -0.7
CLK2-203ENST00000368361 KRTAP19-8Q3LI54 63 aa10.52□□□□□ -0.73
CLK2-203ENST00000368361 KRTAP9-3Q9BYQ3 159 aa10.48□□□□□ -0.73
CLK2-203ENST00000368361 TNP1P09430 55 aa10.45□□□□□ -0.74
CLK2-203ENST00000368361 MT1BP07438 61 aa10.41□□□□□ -0.74
CLK2-203ENST00000368361 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
CLK2-203ENST00000368361 PP632Q6XCG6 107 aa10.36□□□□□ -0.75
CLK2-203ENST00000368361 KRTAP10-5P60370 271 aa10.2□□□□□ -0.78
CLK2-203ENST00000368361 MT1XP80297 61 aa10.2□□□□□ -0.78
CLK2-203ENST00000368361 KRTAP23-1A1A580 65 aa10.19□□□□□ -0.78
CLK2-203ENST00000368361 LCE2BO14633 110 aa10.15□□□□□ -0.79
CLK2-203ENST00000368361 KRTAP15-1Q3LI76 137 aa10.15□□□□□ -0.79
CLK2-203ENST00000368361 LCE3AQ5TA76 89 aa9.99□□□□□ -0.81
CLK2-203ENST00000368361 USH2AO75445 5202 aa9.97□□□□□ -0.81
CLK2-203ENST00000368361 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
CLK2-203ENST00000368361 KRTAP10-7P60409 375 aaPredicted RBP9.87□□□□□ -0.83
CLK2-203ENST00000368361 KRTAP10-12P60413 245 aa9.81□□□□□ -0.84
CLK2-203ENST00000368361 KRTAP8-1Q8IUC2 63 aa9.74□□□□□ -0.85
CLK2-203ENST00000368361 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
CLK2-203ENST00000368361 KRTAP12-3P60328 96 aa9.54□□□□□ -0.88
CLK2-203ENST00000368361 KMT2DO14686 5537 aa9.5□□□□□ -0.89
CLK2-203ENST00000368361 SSPOA2VEC9 5147 aa9.48□□□□□ -0.89
CLK2-203ENST00000368361 SPRR5A0A1B0GTR4 108 aa9.46□□□□□ -0.9
CLK2-203ENST00000368361 KRTAP4-8A0A0G2JLE6 195 aa9.39□□□□□ -0.91
CLK2-203ENST00000368361 KRTAP4-8Q9BYQ9 185 aa9.39□□□□□ -0.91
CLK2-203ENST00000368361 H3BS24 57 aa9.39□□□□□ -0.91
CLK2-203ENST00000368361 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
CLK2-203ENST00000368361 LUZP6Q538Z0 58 aa9.37□□□□□ -0.91
CLK2-203ENST00000368361 KRTAP19-5Q3LI72 72 aa9.34□□□□□ -0.91
CLK2-203ENST00000368361 KRTAP19-6Q3LI70 58 aa9.3□□□□□ -0.92
CLK2-203ENST00000368361 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
CLK2-203ENST00000368361 KRTAP19-7Q3SYF9 63 aa9.1□□□□□ -0.95
CLK2-203ENST00000368361 LCE3CQ5T5A8 94 aa8.95□□□□□ -0.98
CLK2-203ENST00000368361 FCGBPQ9Y6R7 5405 aaPredicted RBP8.93□□□□□ -0.98
CLK2-203ENST00000368361 MT1EP04732 61 aa8.88□□□□□ -0.99
CLK2-203ENST00000368361 MT1LQ93083 61 aa8.78□□□□□ -1
CLK2-203ENST00000368361 KRTAP4-7Q9BYR0 210 aa8.71□□□□□ -1.01
CLK2-203ENST00000368361 KRTAP19-4Q3LI73 84 aa8.64□□□□□ -1.03
CLK2-203ENST00000368361 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
CLK2-203ENST00000368361 KRTAP9-6A8MVA2 160 aa8.58□□□□□ -1.04
CLK2-203ENST00000368361 MUC12Q9UKN1 5478 aa8.56□□□□□ -1.04
CLK2-203ENST00000368361 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms