RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
LMNA-204ENST00000368298 M0R2T5 61 aa9.31□□□□□ -0.92
LMNA-204ENST00000368298 ACYP2P14621 99 aa9.31□□□□□ -0.92
LMNA-204ENST00000368298 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
LMNA-204ENST00000368298 KRTAP10-6P60371 365 aaPredicted RBP9.28□□□□□ -0.92
LMNA-204ENST00000368298 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
LMNA-204ENST00000368298 C4orf26Q17RF5 130 aa9.22□□□□□ -0.93
LMNA-204ENST00000368298 Q1T7F1 81 aa9.2□□□□□ -0.94
LMNA-204ENST00000368298 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
LMNA-204ENST00000368298 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
LMNA-204ENST00000368298 A8MUN3 132 aa9.17□□□□□ -0.94
LMNA-204ENST00000368298 V9GYY9 64 aa9.15□□□□□ -0.94
LMNA-204ENST00000368298 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.95
LMNA-204ENST00000368298 KRTAP9-8Q9BYQ0 159 aa9.09□□□□□ -0.95
LMNA-204ENST00000368298 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
LMNA-204ENST00000368298 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
LMNA-204ENST00000368298 PSPHP1O15172 72 aa9.04□□□□□ -0.96
LMNA-204ENST00000368298 FSIP2Q5CZC0 6907 aa9.02□□□□□ -0.97
LMNA-204ENST00000368298 PRR15LQ9BU68 103 aa9.02□□□□□ -0.97
LMNA-204ENST00000368298 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
LMNA-204ENST00000368298 MT2AP02795 61 aa8.96□□□□□ -0.97
LMNA-204ENST00000368298 Q5VV11 94 aa8.96□□□□□ -0.97
LMNA-204ENST00000368298 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
LMNA-204ENST00000368298 MT1FP04733 61 aa8.89□□□□□ -0.99
LMNA-204ENST00000368298 S4R3F8 94 aa8.88□□□□□ -0.99
LMNA-204ENST00000368298 A0A1B0GU69 56 aa8.84□□□□□ -0.99
LMNA-204ENST00000368298 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
LMNA-204ENST00000368298 LCA10Q71F78 164 aa8.84□□□□□ -0.99
LMNA-204ENST00000368298 BRK1Q8WUW1 75 aa8.81□□□□□ -1
LMNA-204ENST00000368298 CSAG1Q6PB30 78 aa8.79□□□□□ -1
LMNA-204ENST00000368298 KRTAP9-3Q9BYQ3 159 aa8.79□□□□□ -1
LMNA-204ENST00000368298 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
LMNA-204ENST00000368298 A6NED7 52 aa8.77□□□□□ -1.01
LMNA-204ENST00000368298 SEC61GP60059 68 aa8.75□□□□□ -1.01
LMNA-204ENST00000368298 PRO0628Q9UI54 55 aa8.68□□□□□ -1.02
LMNA-204ENST00000368298 USH2AO75445 5202 aa8.66□□□□□ -1.02
LMNA-204ENST00000368298 LCE2BO14633 110 aa8.65□□□□□ -1.02
LMNA-204ENST00000368298 CDC42SE1Q9NRR8 79 aa8.63□□□□□ -1.03
LMNA-204ENST00000368298 A8MU10 97 aa8.62□□□□□ -1.03
LMNA-204ENST00000368298 UQCR11O14957 56 aa8.6□□□□□ -1.03
LMNA-204ENST00000368298 SSPOA2VEC9 5147 aa8.57□□□□□ -1.04
LMNA-204ENST00000368298 H0YAA0 97 aa8.56□□□□□ -1.04
LMNA-204ENST00000368298 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
LMNA-204ENST00000368298 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
LMNA-204ENST00000368298 A0A1B0GU33 70 aa8.52□□□□□ -1.05
LMNA-204ENST00000368298 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
LMNA-204ENST00000368298 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
LMNA-204ENST00000368298 SPRR2GQ9BYE4 73 aa8.45□□□□□ -1.06
LMNA-204ENST00000368298 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
LMNA-204ENST00000368298 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
LMNA-204ENST00000368298 P0C880 135 aa8.41□□□□□ -1.06
LMNA-204ENST00000368298 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
LMNA-204ENST00000368298 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.38□□□□□ -1.07
LMNA-204ENST00000368298 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
LMNA-204ENST00000368298 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
LMNA-204ENST00000368298 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
LMNA-204ENST00000368298 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
LMNA-204ENST00000368298 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
LMNA-204ENST00000368298 MT1BP07438 61 aa8.27□□□□□ -1.09
LMNA-204ENST00000368298 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
LMNA-204ENST00000368298 A6NN06 94 aa8.26□□□□□ -1.09
LMNA-204ENST00000368298 M0QZ58 72 aa8.19□□□□□ -1.1
LMNA-204ENST00000368298 A0A0D9SG42 100 aa8.18□□□□□ -1.1
LMNA-204ENST00000368298 R4GN34 69 aa8.16□□□□□ -1.1
LMNA-204ENST00000368298 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
LMNA-204ENST00000368298 K7ERS5 55 aa8.11□□□□□ -1.11
LMNA-204ENST00000368298 SYNE2Q8WXH0 6885 aaKnown RBP8.03□□□□□ -1.12
LMNA-204ENST00000368298 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
LMNA-204ENST00000368298 KTN1-AS1Q86SY8 53 aa8.02□□□□□ -1.13
LMNA-204ENST00000368298 KRTAP12-1P59990 96 aa7.99□□□□□ -1.13
LMNA-204ENST00000368298 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
LMNA-204ENST00000368298 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
LMNA-204ENST00000368298 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.13
LMNA-204ENST00000368298 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
LMNA-204ENST00000368298 MT1XP80297 61 aa7.84□□□□□ -1.15
LMNA-204ENST00000368298 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.15
LMNA-204ENST00000368298 ROMO1P60602 79 aa7.81□□□□□ -1.16
LMNA-204ENST00000368298 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
LMNA-204ENST00000368298 PRAC1Q96KF2 57 aa7.81□□□□□ -1.16
LMNA-204ENST00000368298 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
LMNA-204ENST00000368298 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
LMNA-204ENST00000368298 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
LMNA-204ENST00000368298 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
LMNA-204ENST00000368298 NEBP20929 6669 aa7.54□□□□□ -1.2
LMNA-204ENST00000368298 KRTAP5-9P26371 169 aa7.49□□□□□ -1.21
LMNA-204ENST00000368298 KMT2DO14686 5537 aa7.48□□□□□ -1.21
LMNA-204ENST00000368298 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
LMNA-204ENST00000368298 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
LMNA-204ENST00000368298 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
LMNA-204ENST00000368298 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
LMNA-204ENST00000368298 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
LMNA-204ENST00000368298 MDN1Q9NU22 5596 aa7.34□□□□□ -1.23
LMNA-204ENST00000368298 TNP1P09430 55 aa7.28□□□□□ -1.24
LMNA-204ENST00000368298 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
LMNA-204ENST00000368298 KRTAP20-1Q3LI63 56 aa7.24□□□□□ -1.25
LMNA-204ENST00000368298 PP632Q6XCG6 107 aa7.15□□□□□ -1.27
LMNA-204ENST00000368298 SPRR2EP22531 72 aa7.14□□□□□ -1.27
LMNA-204ENST00000368298 SPRR2BP35325 72 aa7.14□□□□□ -1.27
LMNA-204ENST00000368298 SPRR2AP35326 72 aa7.14□□□□□ -1.27
LMNA-204ENST00000368298 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms