RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 LCA10Q71F78 164 aa6.72□□□□□ -1.33
CTSD-202ENST00000367196 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
CTSD-202ENST00000367196 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
CTSD-202ENST00000367196 ATOX1O00244 68 aa6.66□□□□□ -1.34
CTSD-202ENST00000367196 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
CTSD-202ENST00000367196 MT1BP07438 61 aa6.65□□□□□ -1.34
CTSD-202ENST00000367196 KLKP1Q107X0 134 aa6.65□□□□□ -1.34
CTSD-202ENST00000367196 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
CTSD-202ENST00000367196 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
CTSD-202ENST00000367196 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
CTSD-202ENST00000367196 UQCRQO14949 82 aa6.6□□□□□ -1.35
CTSD-202ENST00000367196 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
CTSD-202ENST00000367196 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
CTSD-202ENST00000367196 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
CTSD-202ENST00000367196 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
CTSD-202ENST00000367196 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
CTSD-202ENST00000367196 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
CTSD-202ENST00000367196 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
CTSD-202ENST00000367196 NEBP20929 6669 aa6.56□□□□□ -1.36
CTSD-202ENST00000367196 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
CTSD-202ENST00000367196 H0Y9P7 68 aa6.54□□□□□ -1.36
CTSD-202ENST00000367196 MP68P56378 58 aa6.53□□□□□ -1.36
CTSD-202ENST00000367196 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
CTSD-202ENST00000367196 NDUFC1O43677 76 aa6.49□□□□□ -1.37
CTSD-202ENST00000367196 H3BPC8 53 aa6.48□□□□□ -1.37
CTSD-202ENST00000367196 COX7CP15954 63 aa6.48□□□□□ -1.37
CTSD-202ENST00000367196 H0YAA0 97 aa6.47□□□□□ -1.37
CTSD-202ENST00000367196 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
CTSD-202ENST00000367196 A8MUN3 132 aa6.44□□□□□ -1.38
CTSD-202ENST00000367196 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
CTSD-202ENST00000367196 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
CTSD-202ENST00000367196 KRTAP20-1Q3LI63 56 aa6.41□□□□□ -1.38
CTSD-202ENST00000367196 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
CTSD-202ENST00000367196 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
CTSD-202ENST00000367196 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
CTSD-202ENST00000367196 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
CTSD-202ENST00000367196 KMT2DO14686 5537 aa6.33□□□□□ -1.4
CTSD-202ENST00000367196 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
CTSD-202ENST00000367196 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
CTSD-202ENST00000367196 MDN1Q9NU22 5596 aa6.27□□□□□ -1.41
CTSD-202ENST00000367196 TMEM258P61165 79 aa6.26□□□□□ -1.41
CTSD-202ENST00000367196 R4GN34 69 aa6.26□□□□□ -1.41
CTSD-202ENST00000367196 H7BZZ5 65 aa6.25□□□□□ -1.41
CTSD-202ENST00000367196 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
CTSD-202ENST00000367196 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
CTSD-202ENST00000367196 MT1XP80297 61 aa6.21□□□□□ -1.42
CTSD-202ENST00000367196 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
CTSD-202ENST00000367196 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
CTSD-202ENST00000367196 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
CTSD-202ENST00000367196 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
CTSD-202ENST00000367196 M0QZ58 72 aa6.17□□□□□ -1.42
CTSD-202ENST00000367196 SPRR2EP22531 72 aa6.17□□□□□ -1.42
CTSD-202ENST00000367196 SPRR2BP35325 72 aa6.17□□□□□ -1.42
CTSD-202ENST00000367196 SPRR2AP35326 72 aa6.17□□□□□ -1.42
CTSD-202ENST00000367196 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
CTSD-202ENST00000367196 P0C880 135 aa6.15□□□□□ -1.42
CTSD-202ENST00000367196 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
CTSD-202ENST00000367196 ACYP2P14621 99 aa6.13□□□□□ -1.43
CTSD-202ENST00000367196 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
CTSD-202ENST00000367196 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
CTSD-202ENST00000367196 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
CTSD-202ENST00000367196 CHKB-CPT1BH3BT56 60 aa6.05□□□□□ -1.44
CTSD-202ENST00000367196 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
CTSD-202ENST00000367196 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
CTSD-202ENST00000367196 COA5Q86WW8 74 aa6.04□□□□□ -1.44
CTSD-202ENST00000367196 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
CTSD-202ENST00000367196 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
CTSD-202ENST00000367196 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
CTSD-202ENST00000367196 SPRR2DP22532 72 aa5.98□□□□□ -1.45
CTSD-202ENST00000367196 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
CTSD-202ENST00000367196 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
CTSD-202ENST00000367196 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
CTSD-202ENST00000367196 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
CTSD-202ENST00000367196 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
CTSD-202ENST00000367196 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
CTSD-202ENST00000367196 V9GYY9 64 aa5.8□□□□□ -1.48
CTSD-202ENST00000367196 SEC61GP60059 68 aa5.78□□□□□ -1.48
CTSD-202ENST00000367196 A0A1B0GU69 56 aa5.74□□□□□ -1.49
CTSD-202ENST00000367196 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
CTSD-202ENST00000367196 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
CTSD-202ENST00000367196 Q1T7F1 81 aa5.73□□□□□ -1.49
CTSD-202ENST00000367196 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
CTSD-202ENST00000367196 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
CTSD-202ENST00000367196 PSPHP1O15172 72 aa5.61□□□□□ -1.51
CTSD-202ENST00000367196 A0A1B0GU33 70 aa5.6□□□□□ -1.51
CTSD-202ENST00000367196 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
CTSD-202ENST00000367196 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
CTSD-202ENST00000367196 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
CTSD-202ENST00000367196 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
CTSD-202ENST00000367196 MT1EP04732 61 aa5.54□□□□□ -1.52
CTSD-202ENST00000367196 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
CTSD-202ENST00000367196 A0A0D9SG42 100 aa5.53□□□□□ -1.52
CTSD-202ENST00000367196 UQCR11O14957 56 aa5.53□□□□□ -1.52
CTSD-202ENST00000367196 PRO0628Q9UI54 55 aa5.52□□□□□ -1.53
CTSD-202ENST00000367196 A6NED7 52 aa5.5□□□□□ -1.53
CTSD-202ENST00000367196 SPATA8Q6RVD6 105 aa5.49□□□□□ -1.53
CTSD-202ENST00000367196 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
CTSD-202ENST00000367196 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
CTSD-202ENST00000367196 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
CTSD-202ENST00000367196 GPR98Q8WXG9 6306 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms