RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 Q1T7F1 81 aa1.44□□□□□ -2.18
LTN1-201ENST00000361371 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
LTN1-201ENST00000361371 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
LTN1-201ENST00000361371 NDUFC1O43677 76 aa1.43□□□□□ -2.18
LTN1-201ENST00000361371 DMAC1Q96GE9 116 aa1.43□□□□□ -2.18
LTN1-201ENST00000361371 KRTAP3-3Q9BYR6 98 aa1.43□□□□□ -2.18
LTN1-201ENST00000361371 SPANXA2-OT1Q8N9U9 137 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 A8MUN3 132 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 SERP1Q9Y6X1 66 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 LCE2CQ5TA81 110 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 Q5VV11 94 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 PSPHP1O15172 72 aa1.42□□□□□ -2.18
LTN1-201ENST00000361371 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
LTN1-201ENST00000361371 LCA10Q71F78 164 aa1.41□□□□□ -2.18
LTN1-201ENST00000361371 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.18
LTN1-201ENST00000361371 LORP23490 312 aaPredicted RBP1.4□□□□□ -2.19
LTN1-201ENST00000361371 SEC61BP60468 96 aaKnown RBP1.4□□□□□ -2.19
LTN1-201ENST00000361371 SMIM26A0A096LP01 95 aa1.4□□□□□ -2.19
LTN1-201ENST00000361371 ACYP2P14621 99 aa1.39□□□□□ -2.19
LTN1-201ENST00000361371 P0C880 135 aa1.39□□□□□ -2.19
LTN1-201ENST00000361371 CHKB-CPT1BH3BT56 60 aa1.39□□□□□ -2.19
LTN1-201ENST00000361371 KRTAP3-2Q9BYR7 98 aa1.38□□□□□ -2.19
LTN1-201ENST00000361371 KRTAP10-6P60371 365 aaPredicted RBP1.38□□□□□ -2.19
LTN1-201ENST00000361371 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
LTN1-201ENST00000361371 ATP5EP56381 51 aaPredicted RBP1.38□□□□□ -2.19
LTN1-201ENST00000361371 KRTAP13-4Q3LI77 160 aa1.37□□□□□ -2.19
LTN1-201ENST00000361371 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
LTN1-201ENST00000361371 LINC01558Q9Y6Z2 57 aa1.37□□□□□ -2.19
LTN1-201ENST00000361371 SPATA8Q6RVD6 105 aa1.36□□□□□ -2.19
LTN1-201ENST00000361371 MT1HP80294 61 aa1.36□□□□□ -2.19
LTN1-201ENST00000361371 S4R3F8 94 aa1.36□□□□□ -2.19
LTN1-201ENST00000361371 RBM12B-AS1Q9P1G2 102 aa1.36□□□□□ -2.19
LTN1-201ENST00000361371 A0A1B0GU69 56 aa1.34□□□□□ -2.19
LTN1-201ENST00000361371 ADM2Q7Z4H4 148 aa1.34□□□□□ -2.2
LTN1-201ENST00000361371 CSAG1Q6PB30 78 aa1.34□□□□□ -2.2
LTN1-201ENST00000361371 MT1FP04733 61 aa1.33□□□□□ -2.2
LTN1-201ENST00000361371 H0YAA0 97 aa1.33□□□□□ -2.2
LTN1-201ENST00000361371 BRK1Q8WUW1 75 aa1.33□□□□□ -2.2
LTN1-201ENST00000361371 MT2AP02795 61 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 A0A0D9SG42 100 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 KRTAP23-1A1A580 65 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 KRTAP9-8Q9BYQ0 159 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 M0R2T5 61 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 A6NED7 52 aa1.32□□□□□ -2.2
LTN1-201ENST00000361371 LCE2AQ5TA79 106 aaPredicted RBP1.32□□□□□ -2.2
LTN1-201ENST00000361371 A0A1B0GU33 70 aa1.31□□□□□ -2.2
LTN1-201ENST00000361371 LINC01554Q52M75 96 aa1.31□□□□□ -2.2
LTN1-201ENST00000361371 KRTAP19-1Q8IUB9 90 aa1.3□□□□□ -2.2
LTN1-201ENST00000361371 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
LTN1-201ENST00000361371 LCE2DQ5TA82 110 aaPredicted RBP1.29□□□□□ -2.2
LTN1-201ENST00000361371 V9GYY9 64 aa1.29□□□□□ -2.2
LTN1-201ENST00000361371 M0QZ58 72 aa1.29□□□□□ -2.2
LTN1-201ENST00000361371 MIR22HGQ0VDD5 57 aa1.29□□□□□ -2.2
LTN1-201ENST00000361371 UQCR11O14957 56 aa1.29□□□□□ -2.2
LTN1-201ENST00000361371 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
LTN1-201ENST00000361371 KRTAP12-2P59991 146 aa1.28□□□□□ -2.2
LTN1-201ENST00000361371 SEC61GP60059 68 aa1.28□□□□□ -2.2
LTN1-201ENST00000361371 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
LTN1-201ENST00000361371 CDC42SE1Q9NRR8 79 aa1.28□□□□□ -2.2
LTN1-201ENST00000361371 SPINT4Q6UDR6 99 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 R4GN34 69 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 LOC100996750A0A140TA64 210 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 LCE2BO14633 110 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 KRTAP9-3Q9BYQ3 159 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
LTN1-201ENST00000361371 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
LTN1-201ENST00000361371 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
LTN1-201ENST00000361371 MT1BP07438 61 aa1.25□□□□□ -2.21
LTN1-201ENST00000361371 KRTAP19-4Q3LI73 84 aa1.25□□□□□ -2.21
LTN1-201ENST00000361371 PRAC1Q96KF2 57 aa1.25□□□□□ -2.21
LTN1-201ENST00000361371 PMAIP1Q13794 54 aa1.24□□□□□ -2.21
LTN1-201ENST00000361371 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
LTN1-201ENST00000361371 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
LTN1-201ENST00000361371 MUC12Q9UKN1 5478 aa1.22□□□□□ -2.21
LTN1-201ENST00000361371 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP2-2Q9BYT5 123 aa1.21□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP15-1Q3LI76 137 aa1.21□□□□□ -2.22
LTN1-201ENST00000361371 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
LTN1-201ENST00000361371 MACF1Q9UPN3 7388 aaKnown RBP1.2□□□□□ -2.22
LTN1-201ENST00000361371 MT1XP80297 61 aa1.2□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP10-5P60370 271 aa1.2□□□□□ -2.22
LTN1-201ENST00000361371 CAMK2N1Q7Z7J9 78 aa1.19□□□□□ -2.22
LTN1-201ENST00000361371 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
LTN1-201ENST00000361371 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP4-8A0A0G2JLE6 195 aa1.18□□□□□ -2.22
LTN1-201ENST00000361371 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP4-8Q9BYQ9 185 aa1.18□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP10-7P60409 375 aaPredicted RBP1.17□□□□□ -2.22
LTN1-201ENST00000361371 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
LTN1-201ENST00000361371 ROMO1P60602 79 aa1.16□□□□□ -2.22
LTN1-201ENST00000361371 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
LTN1-201ENST00000361371 K7ERS5 55 aa1.16□□□□□ -2.22
LTN1-201ENST00000361371 KRTAP9-2Q9BYQ4 174 aa1.14□□□□□ -2.23
LTN1-201ENST00000361371 LCE3AQ5TA76 89 aa1.13□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP25-1Q3LHN0 102 aa1.13□□□□□ -2.23
LTN1-201ENST00000361371 GPR98Q8WXG9 6306 aa1.12□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.12□□□□□ -2.23
LTN1-201ENST00000361371 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
LTN1-201ENST00000361371 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms