RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 SPATA8Q6RVD6 105 aa9.7□□□□□ -0.86
NLE1-201ENST00000360831 KTN1-AS1Q86SY8 53 aa9.65□□□□□ -0.86
NLE1-201ENST00000360831 UQCR11O14957 56 aa9.64□□□□□ -0.87
NLE1-201ENST00000360831 KRTAP3-1Q9BYR8 98 aa9.64□□□□□ -0.87
NLE1-201ENST00000360831 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
NLE1-201ENST00000360831 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
NLE1-201ENST00000360831 SEC61GP60059 68 aa9.56□□□□□ -0.88
NLE1-201ENST00000360831 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
NLE1-201ENST00000360831 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
NLE1-201ENST00000360831 LPAP08519 4548 aa9.48□□□□□ -0.89
NLE1-201ENST00000360831 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
NLE1-201ENST00000360831 LRP2P98164 4655 aa9.46□□□□□ -0.9
NLE1-201ENST00000360831 XP32Q5T750 250 aa9.39□□□□□ -0.91
NLE1-201ENST00000360831 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
NLE1-201ENST00000360831 A0A1B0GU33 70 aa9.34□□□□□ -0.91
NLE1-201ENST00000360831 RBM12B-AS1Q9P1G2 102 aa9.34□□□□□ -0.91
NLE1-201ENST00000360831 H0YAA0 97 aa9.32□□□□□ -0.92
NLE1-201ENST00000360831 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
NLE1-201ENST00000360831 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
NLE1-201ENST00000360831 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
NLE1-201ENST00000360831 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
NLE1-201ENST00000360831 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
NLE1-201ENST00000360831 S4R3F8 94 aa9.17□□□□□ -0.94
NLE1-201ENST00000360831 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
NLE1-201ENST00000360831 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
NLE1-201ENST00000360831 MUC17Q685J3 4493 aa9.1□□□□□ -0.95
NLE1-201ENST00000360831 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
NLE1-201ENST00000360831 MUC2Q02817 5179 aa9.04□□□□□ -0.96
NLE1-201ENST00000360831 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
NLE1-201ENST00000360831 K7ERS5 55 aa9.01□□□□□ -0.97
NLE1-201ENST00000360831 CSAG1Q6PB30 78 aa8.99□□□□□ -0.97
NLE1-201ENST00000360831 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
NLE1-201ENST00000360831 P0C880 135 aa8.92□□□□□ -0.98
NLE1-201ENST00000360831 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
NLE1-201ENST00000360831 A0A0D9SG42 100 aa8.83□□□□□ -1
NLE1-201ENST00000360831 KRTAP25-1Q3LHN0 102 aa8.83□□□□□ -1
NLE1-201ENST00000360831 ROMO1P60602 79 aa8.8□□□□□ -1
NLE1-201ENST00000360831 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
NLE1-201ENST00000360831 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
NLE1-201ENST00000360831 M0QZ58 72 aa8.73□□□□□ -1.01
NLE1-201ENST00000360831 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
NLE1-201ENST00000360831 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
NLE1-201ENST00000360831 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
NLE1-201ENST00000360831 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
NLE1-201ENST00000360831 CRIPTQ9P021 101 aa8.61□□□□□ -1.03
NLE1-201ENST00000360831 MT1HP80294 61 aa8.57□□□□□ -1.04
NLE1-201ENST00000360831 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
NLE1-201ENST00000360831 M0R2T5 61 aa8.48□□□□□ -1.05
NLE1-201ENST00000360831 R4GN34 69 aa8.45□□□□□ -1.06
NLE1-201ENST00000360831 FLGP20930 4061 aaPredicted RBP8.45□□□□□ -1.06
NLE1-201ENST00000360831 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
NLE1-201ENST00000360831 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
NLE1-201ENST00000360831 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
NLE1-201ENST00000360831 MT2AP02795 61 aa8.09□□□□□ -1.11
NLE1-201ENST00000360831 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
NLE1-201ENST00000360831 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
NLE1-201ENST00000360831 MT1FP04733 61 aa8.03□□□□□ -1.12
NLE1-201ENST00000360831 KRTAP10-10P60014 251 aa8.03□□□□□ -1.12
NLE1-201ENST00000360831 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
NLE1-201ENST00000360831 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
NLE1-201ENST00000360831 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
NLE1-201ENST00000360831 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
NLE1-201ENST00000360831 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
NLE1-201ENST00000360831 H3BS24 57 aa7.82□□□□□ -1.16
NLE1-201ENST00000360831 LCE2BO14633 110 aa7.78□□□□□ -1.16
NLE1-201ENST00000360831 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
NLE1-201ENST00000360831 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
NLE1-201ENST00000360831 TNP1P09430 55 aa7.75□□□□□ -1.17
NLE1-201ENST00000360831 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
NLE1-201ENST00000360831 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
NLE1-201ENST00000360831 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
NLE1-201ENST00000360831 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
NLE1-201ENST00000360831 NDUFAF8A1L188 74 aa7.66□□□□□ -1.18
NLE1-201ENST00000360831 USH2AO75445 5202 aa7.64□□□□□ -1.19
NLE1-201ENST00000360831 KRTAP19-8Q3LI54 63 aa7.55□□□□□ -1.2
NLE1-201ENST00000360831 SSPOA2VEC9 5147 aa7.5□□□□□ -1.21
NLE1-201ENST00000360831 MT1BP07438 61 aa7.47□□□□□ -1.21
NLE1-201ENST00000360831 KRTAP19-6Q3LI70 58 aa7.44□□□□□ -1.22
NLE1-201ENST00000360831 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
NLE1-201ENST00000360831 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
NLE1-201ENST00000360831 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
NLE1-201ENST00000360831 MT1XP80297 61 aa7.3□□□□□ -1.24
NLE1-201ENST00000360831 LUZP6Q538Z0 58 aa7.3□□□□□ -1.24
NLE1-201ENST00000360831 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
NLE1-201ENST00000360831 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.25
NLE1-201ENST00000360831 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
NLE1-201ENST00000360831 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
NLE1-201ENST00000360831 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
NLE1-201ENST00000360831 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
NLE1-201ENST00000360831 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
NLE1-201ENST00000360831 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
NLE1-201ENST00000360831 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
NLE1-201ENST00000360831 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
NLE1-201ENST00000360831 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
NLE1-201ENST00000360831 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
NLE1-201ENST00000360831 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
NLE1-201ENST00000360831 KMT2DO14686 5537 aa6.71□□□□□ -1.34
NLE1-201ENST00000360831 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
NLE1-201ENST00000360831 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
NLE1-201ENST00000360831 KRTAP5-9P26371 169 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms