RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
GABPB1-202ENST00000359031 LCA10Q71F78 164 aa7.83□□□□□ -1.16
GABPB1-202ENST00000359031 LRP2P98164 4655 aa7.83□□□□□ -1.16
GABPB1-202ENST00000359031 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
GABPB1-202ENST00000359031 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
GABPB1-202ENST00000359031 A8MU10 97 aa7.8□□□□□ -1.16
GABPB1-202ENST00000359031 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
GABPB1-202ENST00000359031 SEC61GP60059 68 aa7.73□□□□□ -1.17
GABPB1-202ENST00000359031 UQCR11O14957 56 aa7.7□□□□□ -1.18
GABPB1-202ENST00000359031 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
GABPB1-202ENST00000359031 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
GABPB1-202ENST00000359031 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
GABPB1-202ENST00000359031 A6NN06 94 aa7.6□□□□□ -1.19
GABPB1-202ENST00000359031 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
GABPB1-202ENST00000359031 S4R3F8 94 aa7.56□□□□□ -1.2
GABPB1-202ENST00000359031 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
GABPB1-202ENST00000359031 LPAP08519 4548 aa7.53□□□□□ -1.2
GABPB1-202ENST00000359031 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
GABPB1-202ENST00000359031 A0A1B0GU33 70 aa7.51□□□□□ -1.21
GABPB1-202ENST00000359031 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
GABPB1-202ENST00000359031 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
GABPB1-202ENST00000359031 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.21
GABPB1-202ENST00000359031 H0YAA0 97 aa7.46□□□□□ -1.21
GABPB1-202ENST00000359031 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.21
GABPB1-202ENST00000359031 MUC2Q02817 5179 aa7.41□□□□□ -1.22
GABPB1-202ENST00000359031 KRTAP10-6P60371 365 aaPredicted RBP7.38□□□□□ -1.23
GABPB1-202ENST00000359031 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
GABPB1-202ENST00000359031 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.24
GABPB1-202ENST00000359031 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
GABPB1-202ENST00000359031 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
GABPB1-202ENST00000359031 P0C880 135 aa7.26□□□□□ -1.25
GABPB1-202ENST00000359031 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
GABPB1-202ENST00000359031 K7ERS5 55 aa7.24□□□□□ -1.25
GABPB1-202ENST00000359031 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
GABPB1-202ENST00000359031 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
GABPB1-202ENST00000359031 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
GABPB1-202ENST00000359031 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
GABPB1-202ENST00000359031 A0A0D9SG42 100 aa7.12□□□□□ -1.27
GABPB1-202ENST00000359031 M0QZ58 72 aa7.12□□□□□ -1.27
GABPB1-202ENST00000359031 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
GABPB1-202ENST00000359031 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
GABPB1-202ENST00000359031 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
GABPB1-202ENST00000359031 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
GABPB1-202ENST00000359031 ROMO1P60602 79 aa7□□□□□ -1.29
GABPB1-202ENST00000359031 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
GABPB1-202ENST00000359031 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
GABPB1-202ENST00000359031 R4GN34 69 aa6.97□□□□□ -1.29
GABPB1-202ENST00000359031 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
GABPB1-202ENST00000359031 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
GABPB1-202ENST00000359031 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-202ENST00000359031 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-202ENST00000359031 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
GABPB1-202ENST00000359031 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
GABPB1-202ENST00000359031 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
GABPB1-202ENST00000359031 MT1HP80294 61 aa6.77□□□□□ -1.33
GABPB1-202ENST00000359031 M0R2T5 61 aa6.72□□□□□ -1.33
GABPB1-202ENST00000359031 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
GABPB1-202ENST00000359031 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
GABPB1-202ENST00000359031 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-202ENST00000359031 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
GABPB1-202ENST00000359031 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
GABPB1-202ENST00000359031 MT2AP02795 61 aa6.48□□□□□ -1.37
GABPB1-202ENST00000359031 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
GABPB1-202ENST00000359031 MT1FP04733 61 aa6.45□□□□□ -1.38
GABPB1-202ENST00000359031 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
GABPB1-202ENST00000359031 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
GABPB1-202ENST00000359031 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
GABPB1-202ENST00000359031 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
GABPB1-202ENST00000359031 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
GABPB1-202ENST00000359031 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
GABPB1-202ENST00000359031 USH2AO75445 5202 aa6.37□□□□□ -1.39
GABPB1-202ENST00000359031 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
GABPB1-202ENST00000359031 TNP1P09430 55 aa6.32□□□□□ -1.4
GABPB1-202ENST00000359031 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
GABPB1-202ENST00000359031 FCGBPQ9Y6R7 5405 aaPredicted RBP6.29□□□□□ -1.4
GABPB1-202ENST00000359031 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
GABPB1-202ENST00000359031 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
GABPB1-202ENST00000359031 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
GABPB1-202ENST00000359031 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
GABPB1-202ENST00000359031 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
GABPB1-202ENST00000359031 LCE2BO14633 110 aa6.2□□□□□ -1.42
GABPB1-202ENST00000359031 MT1BP07438 61 aa6.19□□□□□ -1.42
GABPB1-202ENST00000359031 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
GABPB1-202ENST00000359031 MT1XP80297 61 aa6.07□□□□□ -1.44
GABPB1-202ENST00000359031 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
GABPB1-202ENST00000359031 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
GABPB1-202ENST00000359031 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
GABPB1-202ENST00000359031 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
GABPB1-202ENST00000359031 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
GABPB1-202ENST00000359031 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
GABPB1-202ENST00000359031 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
GABPB1-202ENST00000359031 NEBP20929 6669 aa5.85□□□□□ -1.47
GABPB1-202ENST00000359031 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
GABPB1-202ENST00000359031 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
GABPB1-202ENST00000359031 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
GABPB1-202ENST00000359031 H3BS24 57 aa5.77□□□□□ -1.49
GABPB1-202ENST00000359031 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
GABPB1-202ENST00000359031 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
GABPB1-202ENST00000359031 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
GABPB1-202ENST00000359031 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms