RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 XP32Q5T750 250 aa7.13□□□□□ -1.27
NFIX-201ENST00000358552 A6NN06 94 aa7.11□□□□□ -1.27
NFIX-201ENST00000358552 A8MU10 97 aa7.08□□□□□ -1.28
NFIX-201ENST00000358552 UQCR11O14957 56 aa7.08□□□□□ -1.28
NFIX-201ENST00000358552 SEC61GP60059 68 aa7.07□□□□□ -1.28
NFIX-201ENST00000358552 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
NFIX-201ENST00000358552 HERC1Q15751 4861 aa7.05□□□□□ -1.28
NFIX-201ENST00000358552 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
NFIX-201ENST00000358552 SEC61BP60468 96 aaKnown RBP6.98□□□□□ -1.29
NFIX-201ENST00000358552 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
NFIX-201ENST00000358552 LPAP08519 4548 aa6.91□□□□□ -1.3
NFIX-201ENST00000358552 LCE2DQ5TA82 110 aaPredicted RBP6.88□□□□□ -1.31
NFIX-201ENST00000358552 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
NFIX-201ENST00000358552 LRP2P98164 4655 aa6.84□□□□□ -1.31
NFIX-201ENST00000358552 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
NFIX-201ENST00000358552 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
NFIX-201ENST00000358552 A0A1B0GU33 70 aa6.78□□□□□ -1.32
NFIX-201ENST00000358552 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
NFIX-201ENST00000358552 K7ERS5 55 aa6.73□□□□□ -1.33
NFIX-201ENST00000358552 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
NFIX-201ENST00000358552 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
NFIX-201ENST00000358552 S4R3F8 94 aa6.7□□□□□ -1.34
NFIX-201ENST00000358552 UBR4Q5T4S7 5183 aa6.67□□□□□ -1.34
NFIX-201ENST00000358552 H0YAA0 97 aa6.67□□□□□ -1.34
NFIX-201ENST00000358552 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
NFIX-201ENST00000358552 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
NFIX-201ENST00000358552 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
NFIX-201ENST00000358552 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
NFIX-201ENST00000358552 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
NFIX-201ENST00000358552 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
NFIX-201ENST00000358552 MUC2Q02817 5179 aa6.54□□□□□ -1.36
NFIX-201ENST00000358552 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
NFIX-201ENST00000358552 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
NFIX-201ENST00000358552 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
NFIX-201ENST00000358552 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
NFIX-201ENST00000358552 ROMO1P60602 79 aa6.43□□□□□ -1.38
NFIX-201ENST00000358552 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
NFIX-201ENST00000358552 M0QZ58 72 aa6.36□□□□□ -1.39
NFIX-201ENST00000358552 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
NFIX-201ENST00000358552 A0A0D9SG42 100 aa6.3□□□□□ -1.4
NFIX-201ENST00000358552 P0C880 135 aa6.29□□□□□ -1.4
NFIX-201ENST00000358552 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
NFIX-201ENST00000358552 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
NFIX-201ENST00000358552 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
NFIX-201ENST00000358552 MT1HP80294 61 aa6.22□□□□□ -1.41
NFIX-201ENST00000358552 R4GN34 69 aa6.22□□□□□ -1.41
NFIX-201ENST00000358552 M0R2T5 61 aa6.19□□□□□ -1.42
NFIX-201ENST00000358552 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
NFIX-201ENST00000358552 SPINT4Q6UDR6 99 aa6.16□□□□□ -1.42
NFIX-201ENST00000358552 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
NFIX-201ENST00000358552 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
NFIX-201ENST00000358552 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
NFIX-201ENST00000358552 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
NFIX-201ENST00000358552 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
NFIX-201ENST00000358552 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
NFIX-201ENST00000358552 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
NFIX-201ENST00000358552 MT2AP02795 61 aa5.94□□□□□ -1.46
NFIX-201ENST00000358552 MT1FP04733 61 aa5.88□□□□□ -1.47
NFIX-201ENST00000358552 H3BS24 57 aa5.87□□□□□ -1.47
NFIX-201ENST00000358552 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
NFIX-201ENST00000358552 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
NFIX-201ENST00000358552 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
NFIX-201ENST00000358552 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
NFIX-201ENST00000358552 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
NFIX-201ENST00000358552 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
NFIX-201ENST00000358552 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
NFIX-201ENST00000358552 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
NFIX-201ENST00000358552 LCE2BO14633 110 aa5.72□□□□□ -1.49
NFIX-201ENST00000358552 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
NFIX-201ENST00000358552 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
NFIX-201ENST00000358552 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.51
NFIX-201ENST00000358552 TNP1P09430 55 aa5.64□□□□□ -1.51
NFIX-201ENST00000358552 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
NFIX-201ENST00000358552 MT1BP07438 61 aa5.6□□□□□ -1.51
NFIX-201ENST00000358552 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
NFIX-201ENST00000358552 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
NFIX-201ENST00000358552 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
NFIX-201ENST00000358552 USH2AO75445 5202 aa5.46□□□□□ -1.54
NFIX-201ENST00000358552 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
NFIX-201ENST00000358552 MT1XP80297 61 aa5.45□□□□□ -1.54
NFIX-201ENST00000358552 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
NFIX-201ENST00000358552 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
NFIX-201ENST00000358552 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
NFIX-201ENST00000358552 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
NFIX-201ENST00000358552 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
NFIX-201ENST00000358552 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
NFIX-201ENST00000358552 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
NFIX-201ENST00000358552 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
NFIX-201ENST00000358552 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
NFIX-201ENST00000358552 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
NFIX-201ENST00000358552 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.6
NFIX-201ENST00000358552 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.6
NFIX-201ENST00000358552 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
NFIX-201ENST00000358552 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
NFIX-201ENST00000358552 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
NFIX-201ENST00000358552 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
NFIX-201ENST00000358552 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
NFIX-201ENST00000358552 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
NFIX-201ENST00000358552 KMT2DO14686 5537 aa4.93□□□□□ -1.62
NFIX-201ENST00000358552 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms