RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 A6NN06 94 aa7.78□□□□□ -1.16
NIPAL3-203ENST00000358028 A8MUU9 505 aa7.77□□□□□ -1.17
NIPAL3-203ENST00000358028 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
NIPAL3-203ENST00000358028 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
NIPAL3-203ENST00000358028 RNF213Q63HN8 5207 aa7.72□□□□□ -1.17
NIPAL3-203ENST00000358028 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
NIPAL3-203ENST00000358028 LPAP08519 4548 aa7.68□□□□□ -1.18
NIPAL3-203ENST00000358028 UQCR11O14957 56 aa7.68□□□□□ -1.18
NIPAL3-203ENST00000358028 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
NIPAL3-203ENST00000358028 SEC61GP60059 68 aa7.62□□□□□ -1.19
NIPAL3-203ENST00000358028 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
NIPAL3-203ENST00000358028 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
NIPAL3-203ENST00000358028 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
NIPAL3-203ENST00000358028 RBM12B-AS1Q9P1G2 102 aa7.48□□□□□ -1.21
NIPAL3-203ENST00000358028 XP32Q5T750 250 aa7.46□□□□□ -1.22
NIPAL3-203ENST00000358028 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
NIPAL3-203ENST00000358028 MUC2Q02817 5179 aa7.43□□□□□ -1.22
NIPAL3-203ENST00000358028 A0A1B0GU33 70 aa7.4□□□□□ -1.23
NIPAL3-203ENST00000358028 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
NIPAL3-203ENST00000358028 H0YAA0 97 aa7.37□□□□□ -1.23
NIPAL3-203ENST00000358028 MUC17Q685J3 4493 aa7.35□□□□□ -1.23
NIPAL3-203ENST00000358028 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
NIPAL3-203ENST00000358028 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
NIPAL3-203ENST00000358028 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
NIPAL3-203ENST00000358028 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
NIPAL3-203ENST00000358028 S4R3F8 94 aa7.23□□□□□ -1.25
NIPAL3-203ENST00000358028 K7ERS5 55 aa7.2□□□□□ -1.26
NIPAL3-203ENST00000358028 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
NIPAL3-203ENST00000358028 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
NIPAL3-203ENST00000358028 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
NIPAL3-203ENST00000358028 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
NIPAL3-203ENST00000358028 LINC01554Q52M75 96 aa7.15□□□□□ -1.27
NIPAL3-203ENST00000358028 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.27
NIPAL3-203ENST00000358028 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
NIPAL3-203ENST00000358028 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
NIPAL3-203ENST00000358028 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
NIPAL3-203ENST00000358028 P0C880 135 aa7□□□□□ -1.29
NIPAL3-203ENST00000358028 ROMO1P60602 79 aa7□□□□□ -1.29
NIPAL3-203ENST00000358028 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
NIPAL3-203ENST00000358028 A0A0D9SG42 100 aa6.95□□□□□ -1.3
NIPAL3-203ENST00000358028 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
NIPAL3-203ENST00000358028 M0QZ58 72 aa6.91□□□□□ -1.3
NIPAL3-203ENST00000358028 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
NIPAL3-203ENST00000358028 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
NIPAL3-203ENST00000358028 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
NIPAL3-203ENST00000358028 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
NIPAL3-203ENST00000358028 MT1HP80294 61 aa6.81□□□□□ -1.32
NIPAL3-203ENST00000358028 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
NIPAL3-203ENST00000358028 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
NIPAL3-203ENST00000358028 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-203ENST00000358028 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
NIPAL3-203ENST00000358028 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
NIPAL3-203ENST00000358028 M0R2T5 61 aa6.67□□□□□ -1.34
NIPAL3-203ENST00000358028 R4GN34 69 aa6.67□□□□□ -1.34
NIPAL3-203ENST00000358028 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
NIPAL3-203ENST00000358028 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
NIPAL3-203ENST00000358028 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
NIPAL3-203ENST00000358028 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
NIPAL3-203ENST00000358028 MT2AP02795 61 aa6.41□□□□□ -1.38
NIPAL3-203ENST00000358028 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
NIPAL3-203ENST00000358028 USH2AO75445 5202 aa6.37□□□□□ -1.39
NIPAL3-203ENST00000358028 MT1FP04733 61 aa6.37□□□□□ -1.39
NIPAL3-203ENST00000358028 H3BS24 57 aa6.34□□□□□ -1.4
NIPAL3-203ENST00000358028 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
NIPAL3-203ENST00000358028 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
NIPAL3-203ENST00000358028 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
NIPAL3-203ENST00000358028 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
NIPAL3-203ENST00000358028 KRTAP9-3Q9BYQ3 159 aa6.26□□□□□ -1.41
NIPAL3-203ENST00000358028 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
NIPAL3-203ENST00000358028 LCE2BO14633 110 aa6.2□□□□□ -1.42
NIPAL3-203ENST00000358028 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
NIPAL3-203ENST00000358028 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
NIPAL3-203ENST00000358028 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
NIPAL3-203ENST00000358028 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
NIPAL3-203ENST00000358028 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
NIPAL3-203ENST00000358028 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
NIPAL3-203ENST00000358028 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
NIPAL3-203ENST00000358028 TNP1P09430 55 aa6.13□□□□□ -1.43
NIPAL3-203ENST00000358028 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
NIPAL3-203ENST00000358028 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
NIPAL3-203ENST00000358028 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.45
NIPAL3-203ENST00000358028 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
NIPAL3-203ENST00000358028 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
NIPAL3-203ENST00000358028 MT1BP07438 61 aa5.9□□□□□ -1.47
NIPAL3-203ENST00000358028 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
NIPAL3-203ENST00000358028 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
NIPAL3-203ENST00000358028 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
NIPAL3-203ENST00000358028 MT1XP80297 61 aa5.77□□□□□ -1.49
NIPAL3-203ENST00000358028 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
NIPAL3-203ENST00000358028 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
NIPAL3-203ENST00000358028 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
NIPAL3-203ENST00000358028 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
NIPAL3-203ENST00000358028 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
NIPAL3-203ENST00000358028 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
NIPAL3-203ENST00000358028 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
NIPAL3-203ENST00000358028 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.52
NIPAL3-203ENST00000358028 NEBP20929 6669 aa5.58□□□□□ -1.52
NIPAL3-203ENST00000358028 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
NIPAL3-203ENST00000358028 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
NIPAL3-203ENST00000358028 KMT2DO14686 5537 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms