RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LOC101927531A0A1B0GV80 90 aa7.55□□□□□ -1.2
CCNE1-202ENST00000357943 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.2
CCNE1-202ENST00000357943 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.2
CCNE1-202ENST00000357943 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
CCNE1-202ENST00000357943 MT1HP80294 61 aa7.44□□□□□ -1.22
CCNE1-202ENST00000357943 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
CCNE1-202ENST00000357943 PSPHP1O15172 72 aa7.35□□□□□ -1.23
CCNE1-202ENST00000357943 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
CCNE1-202ENST00000357943 A8MUN3 132 aa7.32□□□□□ -1.24
CCNE1-202ENST00000357943 M0R2T5 61 aa7.32□□□□□ -1.24
CCNE1-202ENST00000357943 H1FX-AS1Q4G0G2 97 aa7.32□□□□□ -1.24
CCNE1-202ENST00000357943 Q5VV11 94 aa7.32□□□□□ -1.24
CCNE1-202ENST00000357943 COA5Q86WW8 74 aa7.32□□□□□ -1.24
CCNE1-202ENST00000357943 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
CCNE1-202ENST00000357943 CHKB-CPT1BH3BT56 60 aa7.28□□□□□ -1.24
CCNE1-202ENST00000357943 LCE2BO14633 110 aa7.28□□□□□ -1.24
CCNE1-202ENST00000357943 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
CCNE1-202ENST00000357943 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
CCNE1-202ENST00000357943 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
CCNE1-202ENST00000357943 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
CCNE1-202ENST00000357943 ACYP2P14621 99 aa7.21□□□□□ -1.26
CCNE1-202ENST00000357943 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
CCNE1-202ENST00000357943 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CCNE1-202ENST00000357943 A6NED7 52 aa7.19□□□□□ -1.26
CCNE1-202ENST00000357943 S4R3F8 94 aa7.18□□□□□ -1.26
CCNE1-202ENST00000357943 SEC61GP60059 68 aa7.17□□□□□ -1.26
CCNE1-202ENST00000357943 LCA10Q71F78 164 aa7.17□□□□□ -1.26
CCNE1-202ENST00000357943 KTN1-AS1Q86SY8 53 aa7.12□□□□□ -1.27
CCNE1-202ENST00000357943 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
CCNE1-202ENST00000357943 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
CCNE1-202ENST00000357943 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
CCNE1-202ENST00000357943 A6NN06 94 aa7.05□□□□□ -1.28
CCNE1-202ENST00000357943 MT2AP02795 61 aa7.04□□□□□ -1.28
CCNE1-202ENST00000357943 MT1FP04733 61 aa7□□□□□ -1.29
CCNE1-202ENST00000357943 A8MU10 97 aa6.98□□□□□ -1.29
CCNE1-202ENST00000357943 A0A1B0GU69 56 aa6.96□□□□□ -1.3
CCNE1-202ENST00000357943 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
CCNE1-202ENST00000357943 SPATA8Q6RVD6 105 aa6.92□□□□□ -1.3
CCNE1-202ENST00000357943 UQCR11O14957 56 aa6.9□□□□□ -1.3
CCNE1-202ENST00000357943 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
CCNE1-202ENST00000357943 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
CCNE1-202ENST00000357943 H0YAA0 97 aa6.85□□□□□ -1.31
CCNE1-202ENST00000357943 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
CCNE1-202ENST00000357943 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
CCNE1-202ENST00000357943 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
CCNE1-202ENST00000357943 USH2AO75445 5202 aa6.79□□□□□ -1.32
CCNE1-202ENST00000357943 P0C880 135 aa6.75□□□□□ -1.33
CCNE1-202ENST00000357943 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
CCNE1-202ENST00000357943 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
CCNE1-202ENST00000357943 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
CCNE1-202ENST00000357943 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
CCNE1-202ENST00000357943 R4GN34 69 aa6.61□□□□□ -1.35
CCNE1-202ENST00000357943 A0A1B0GU33 70 aa6.61□□□□□ -1.35
CCNE1-202ENST00000357943 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
CCNE1-202ENST00000357943 M0QZ58 72 aa6.58□□□□□ -1.36
CCNE1-202ENST00000357943 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
CCNE1-202ENST00000357943 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
CCNE1-202ENST00000357943 CRCT1Q9UGL9 99 aa6.54□□□□□ -1.36
CCNE1-202ENST00000357943 K7ERS5 55 aa6.53□□□□□ -1.36
CCNE1-202ENST00000357943 MT1BP07438 61 aa6.53□□□□□ -1.36
CCNE1-202ENST00000357943 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
CCNE1-202ENST00000357943 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
CCNE1-202ENST00000357943 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
CCNE1-202ENST00000357943 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
CCNE1-202ENST00000357943 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
CCNE1-202ENST00000357943 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CCNE1-202ENST00000357943 A0A0D9SG42 100 aa6.34□□□□□ -1.39
CCNE1-202ENST00000357943 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
CCNE1-202ENST00000357943 ROMO1P60602 79 aa6.27□□□□□ -1.41
CCNE1-202ENST00000357943 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
CCNE1-202ENST00000357943 MT1XP80297 61 aa6.23□□□□□ -1.41
CCNE1-202ENST00000357943 KRTAP12-2P59991 146 aa6.21□□□□□ -1.41
CCNE1-202ENST00000357943 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
CCNE1-202ENST00000357943 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
CCNE1-202ENST00000357943 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
CCNE1-202ENST00000357943 H3BS24 57 aa6.16□□□□□ -1.42
CCNE1-202ENST00000357943 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
CCNE1-202ENST00000357943 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
CCNE1-202ENST00000357943 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CCNE1-202ENST00000357943 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
CCNE1-202ENST00000357943 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
CCNE1-202ENST00000357943 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
CCNE1-202ENST00000357943 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
CCNE1-202ENST00000357943 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
CCNE1-202ENST00000357943 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
CCNE1-202ENST00000357943 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
CCNE1-202ENST00000357943 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
CCNE1-202ENST00000357943 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
CCNE1-202ENST00000357943 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
CCNE1-202ENST00000357943 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
CCNE1-202ENST00000357943 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CCNE1-202ENST00000357943 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.48
CCNE1-202ENST00000357943 TNP1P09430 55 aa5.76□□□□□ -1.49
CCNE1-202ENST00000357943 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
CCNE1-202ENST00000357943 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
CCNE1-202ENST00000357943 MDN1Q9NU22 5596 aa5.71□□□□□ -1.5
CCNE1-202ENST00000357943 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
CCNE1-202ENST00000357943 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
CCNE1-202ENST00000357943 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
CCNE1-202ENST00000357943 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms