RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 CDC42SE1Q9NRR8 79 aa13.57□□□□□ -0.24
C1orf228-201ENST00000357508 SPTSSBQ8NFR3 76 aa13.54□□□□□ -0.24
C1orf228-201ENST00000357508 TPRXLQ17RH7 258 aa13.48□□□□□ -0.25
C1orf228-201ENST00000357508 LPAP08519 4548 aa13.38□□□□□ -0.27
C1orf228-201ENST00000357508 SEC61GP60059 68 aa13.34□□□□□ -0.27
C1orf228-201ENST00000357508 HERC1Q15751 4861 aa13.33□□□□□ -0.28
C1orf228-201ENST00000357508 UQCR11O14957 56 aa13.33□□□□□ -0.28
C1orf228-201ENST00000357508 SPATA8Q6RVD6 105 aa13.29□□□□□ -0.28
C1orf228-201ENST00000357508 PMAIP1Q13794 54 aa13.28□□□□□ -0.28
C1orf228-201ENST00000357508 LRP2P98164 4655 aa13.27□□□□□ -0.28
C1orf228-201ENST00000357508 MIR22HGQ0VDD5 57 aa13.25□□□□□ -0.29
C1orf228-201ENST00000357508 KRTAP3-3Q9BYR6 98 aa13.19□□□□□ -0.3
C1orf228-201ENST00000357508 A6NN06 94 aa13.15□□□□□ -0.3
C1orf228-201ENST00000357508 S4R3F8 94 aa13.13□□□□□ -0.31
C1orf228-201ENST00000357508 HMCN2Q8NDA2 5059 aa13.12□□□□□ -0.31
C1orf228-201ENST00000357508 H1FX-AS1Q4G0G2 97 aa13.08□□□□□ -0.32
C1orf228-201ENST00000357508 A0A1B0GU33 70 aa13.05□□□□□ -0.32
C1orf228-201ENST00000357508 H0YAA0 97 aa13.01□□□□□ -0.33
C1orf228-201ENST00000357508 RBM12B-AS1Q9P1G2 102 aa13□□□□□ -0.33
C1orf228-201ENST00000357508 SEC61BP60468 96 aaKnown RBP12.97□□□□□ -0.33
C1orf228-201ENST00000357508 KRTAP10-6P60371 365 aaPredicted RBP12.91□□□□□ -0.34
C1orf228-201ENST00000357508 KTN1-AS1Q86SY8 53 aa12.9□□□□□ -0.34
C1orf228-201ENST00000357508 KRTAP3-2Q9BYR7 98 aa12.87□□□□□ -0.35
C1orf228-201ENST00000357508 MUC17Q685J3 4493 aa12.83□□□□□ -0.36
C1orf228-201ENST00000357508 KRTAP4-1Q9BYQ7 146 aa12.8□□□□□ -0.36
C1orf228-201ENST00000357508 CSAG1Q6PB30 78 aa12.74□□□□□ -0.37
C1orf228-201ENST00000357508 P0C880 135 aa12.71□□□□□ -0.37
C1orf228-201ENST00000357508 KRTAP13-4Q3LI77 160 aa12.67□□□□□ -0.38
C1orf228-201ENST00000357508 ADM2Q7Z4H4 148 aa12.66□□□□□ -0.38
C1orf228-201ENST00000357508 MUC2Q02817 5179 aa12.63□□□□□ -0.39
C1orf228-201ENST00000357508 UBR4Q5T4S7 5183 aa12.61□□□□□ -0.39
C1orf228-201ENST00000357508 KRTAP19-2Q3LHN2 52 aa12.53□□□□□ -0.4
C1orf228-201ENST00000357508 A0A0D9SG42 100 aa12.46□□□□□ -0.41
C1orf228-201ENST00000357508 K7ERS5 55 aa12.46□□□□□ -0.41
C1orf228-201ENST00000357508 PRAC1Q96KF2 57 aa12.46□□□□□ -0.42
C1orf228-201ENST00000357508 RNF213Q63HN8 5207 aa12.43□□□□□ -0.42
C1orf228-201ENST00000357508 M0QZ58 72 aa12.34□□□□□ -0.43
C1orf228-201ENST00000357508 KRTAP12-2P59991 146 aa12.2□□□□□ -0.46
C1orf228-201ENST00000357508 KRTAP12-1P59990 96 aa12.19□□□□□ -0.46
C1orf228-201ENST00000357508 LCE2CQ5TA81 110 aa12.16□□□□□ -0.46
C1orf228-201ENST00000357508 FLGP20930 4061 aaPredicted RBP12.14□□□□□ -0.47
C1orf228-201ENST00000357508 R4GN34 69 aa12.13□□□□□ -0.47
C1orf228-201ENST00000357508 LORP23490 312 aaPredicted RBP12.11□□□□□ -0.47
C1orf228-201ENST00000357508 ROMO1P60602 79 aa12.11□□□□□ -0.47
C1orf228-201ENST00000357508 SPINT4Q6UDR6 99 aa12.1□□□□□ -0.47
C1orf228-201ENST00000357508 FAT4Q6V0I7 4981 aa12.1□□□□□ -0.47
C1orf228-201ENST00000357508 LINC01554Q52M75 96 aa12□□□□□ -0.49
C1orf228-201ENST00000357508 KRTAP25-1Q3LHN0 102 aa11.95□□□□□ -0.5
C1orf228-201ENST00000357508 MT1HP80294 61 aa11.91□□□□□ -0.5
C1orf228-201ENST00000357508 CRIPTQ9P021 101 aa11.9□□□□□ -0.5
C1orf228-201ENST00000357508 M0R2T5 61 aa11.77□□□□□ -0.52
C1orf228-201ENST00000357508 C10orf95Q9H7T3 257 aa11.61□□□□□ -0.55
C1orf228-201ENST00000357508 LCE2AQ5TA79 106 aaPredicted RBP11.51□□□□□ -0.57
C1orf228-201ENST00000357508 KRTAP9-8Q9BYQ0 159 aa11.47□□□□□ -0.57
C1orf228-201ENST00000357508 CAMK2N1Q7Z7J9 78 aa11.44□□□□□ -0.58
C1orf228-201ENST00000357508 MT2AP02795 61 aa11.42□□□□□ -0.58
C1orf228-201ENST00000357508 SPRR2GQ9BYE4 73 aa11.41□□□□□ -0.58
C1orf228-201ENST00000357508 MT1FP04733 61 aa11.36□□□□□ -0.59
C1orf228-201ENST00000357508 KRTAP19-1Q8IUB9 90 aa11.36□□□□□ -0.59
C1orf228-201ENST00000357508 KRTAP10-10P60014 251 aa11.31□□□□□ -0.6
C1orf228-201ENST00000357508 PLAC4Q8WY50 150 aa11.14□□□□□ -0.63
C1orf228-201ENST00000357508 KRTAP9-3Q9BYQ3 159 aa11.05□□□□□ -0.64
C1orf228-201ENST00000357508 KRTAP19-8Q3LI54 63 aa11.01□□□□□ -0.65
C1orf228-201ENST00000357508 TNP1P09430 55 aa10.97□□□□□ -0.65
C1orf228-201ENST00000357508 PP632Q6XCG6 107 aa10.94□□□□□ -0.66
C1orf228-201ENST00000357508 MT1BP07438 61 aa10.87□□□□□ -0.67
C1orf228-201ENST00000357508 LCE2BO14633 110 aa10.78□□□□□ -0.68
C1orf228-201ENST00000357508 KRTAP23-1A1A580 65 aa10.76□□□□□ -0.69
C1orf228-201ENST00000357508 KRTAP15-1Q3LI76 137 aa10.76□□□□□ -0.69
C1orf228-201ENST00000357508 MT1XP80297 61 aa10.65□□□□□ -0.7
C1orf228-201ENST00000357508 KRTAP10-5P60370 271 aa10.64□□□□□ -0.71
C1orf228-201ENST00000357508 USH2AO75445 5202 aa10.56□□□□□ -0.72
C1orf228-201ENST00000357508 LCE3AQ5TA76 89 aa10.46□□□□□ -0.73
C1orf228-201ENST00000357508 LCE2DQ5TA82 110 aaPredicted RBP10.44□□□□□ -0.74
C1orf228-201ENST00000357508 PRO2289Q9P1D8 64 aa10.35□□□□□ -0.75
C1orf228-201ENST00000357508 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
C1orf228-201ENST00000357508 KRTAP10-7P60409 375 aaPredicted RBP10.28□□□□□ -0.76
C1orf228-201ENST00000357508 KRTAP10-12P60413 245 aa10.27□□□□□ -0.77
C1orf228-201ENST00000357508 SSPOA2VEC9 5147 aa10.25□□□□□ -0.77
C1orf228-201ENST00000357508 KRTAP8-1Q8IUC2 63 aa10.24□□□□□ -0.77
C1orf228-201ENST00000357508 NDUFAF8A1L188 74 aa10.21□□□□□ -0.78
C1orf228-201ENST00000357508 KRTAP9-2Q9BYQ4 174 aa10.13□□□□□ -0.79
C1orf228-201ENST00000357508 KRTAP19-6Q3LI70 58 aa10.09□□□□□ -0.79
C1orf228-201ENST00000357508 SPRR5A0A1B0GTR4 108 aa10.01□□□□□ -0.81
C1orf228-201ENST00000357508 KRTAP12-3P60328 96 aa10□□□□□ -0.81
C1orf228-201ENST00000357508 H3BS24 57 aa9.94□□□□□ -0.82
C1orf228-201ENST00000357508 LUZP6Q538Z0 58 aa9.91□□□□□ -0.82
C1orf228-201ENST00000357508 FCGBPQ9Y6R7 5405 aaPredicted RBP9.82□□□□□ -0.84
C1orf228-201ENST00000357508 KRTAP19-5Q3LI72 72 aa9.76□□□□□ -0.85
C1orf228-201ENST00000357508 CRCT1Q9UGL9 99 aa9.75□□□□□ -0.85
C1orf228-201ENST00000357508 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
C1orf228-201ENST00000357508 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
C1orf228-201ENST00000357508 KMT2DO14686 5537 aa9.68□□□□□ -0.86
C1orf228-201ENST00000357508 KRTAP19-7Q3SYF9 63 aa9.5□□□□□ -0.89
C1orf228-201ENST00000357508 MACF1Q9UPN3 7388 aaKnown RBP9.39□□□□□ -0.91
C1orf228-201ENST00000357508 LCE3CQ5T5A8 94 aa9.38□□□□□ -0.91
C1orf228-201ENST00000357508 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
C1orf228-201ENST00000357508 MT1EP04732 61 aa9.27□□□□□ -0.93
C1orf228-201ENST00000357508 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
C1orf228-201ENST00000357508 MT1LQ93083 61 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms