RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 H7BZZ5 65 aa7.71□□□□□ -1.18
FDPS-201ENST00000356657 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
FDPS-201ENST00000356657 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
FDPS-201ENST00000356657 LCA10Q71F78 164 aa7.67□□□□□ -1.18
FDPS-201ENST00000356657 TMEM258P61165 79 aa7.66□□□□□ -1.18
FDPS-201ENST00000356657 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
FDPS-201ENST00000356657 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
FDPS-201ENST00000356657 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
FDPS-201ENST00000356657 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
FDPS-201ENST00000356657 MT2AP02795 61 aa7.59□□□□□ -1.19
FDPS-201ENST00000356657 ACYP2P14621 99 aa7.57□□□□□ -1.2
FDPS-201ENST00000356657 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
FDPS-201ENST00000356657 ATP5EP56381 51 aaPredicted RBP7.56□□□□□ -1.2
FDPS-201ENST00000356657 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
FDPS-201ENST00000356657 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
FDPS-201ENST00000356657 MT1FP04733 61 aa7.52□□□□□ -1.21
FDPS-201ENST00000356657 H0YAA0 97 aa7.48□□□□□ -1.21
FDPS-201ENST00000356657 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.22
FDPS-201ENST00000356657 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
FDPS-201ENST00000356657 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
FDPS-201ENST00000356657 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
FDPS-201ENST00000356657 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
FDPS-201ENST00000356657 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
FDPS-201ENST00000356657 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
FDPS-201ENST00000356657 COA5Q86WW8 74 aa7.32□□□□□ -1.24
FDPS-201ENST00000356657 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
FDPS-201ENST00000356657 USH2AO75445 5202 aa7.29□□□□□ -1.24
FDPS-201ENST00000356657 LCE2BO14633 110 aa7.26□□□□□ -1.25
FDPS-201ENST00000356657 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
FDPS-201ENST00000356657 SMIM26A0A096LP01 95 aa7.22□□□□□ -1.25
FDPS-201ENST00000356657 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
FDPS-201ENST00000356657 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
FDPS-201ENST00000356657 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
FDPS-201ENST00000356657 P0C880 135 aa7.17□□□□□ -1.26
FDPS-201ENST00000356657 R4GN34 69 aa7.15□□□□□ -1.27
FDPS-201ENST00000356657 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
FDPS-201ENST00000356657 SEC61GP60059 68 aa7.11□□□□□ -1.27
FDPS-201ENST00000356657 Q5VV11 94 aa7.11□□□□□ -1.27
FDPS-201ENST00000356657 Q1T7F1 81 aa7.08□□□□□ -1.28
FDPS-201ENST00000356657 M0QZ58 72 aa7.07□□□□□ -1.28
FDPS-201ENST00000356657 V9GYY9 64 aa7.05□□□□□ -1.28
FDPS-201ENST00000356657 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
FDPS-201ENST00000356657 MT1BP07438 61 aa7.01□□□□□ -1.29
FDPS-201ENST00000356657 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
FDPS-201ENST00000356657 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
FDPS-201ENST00000356657 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
FDPS-201ENST00000356657 A0A1B0GU69 56 aa6.97□□□□□ -1.29
FDPS-201ENST00000356657 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
FDPS-201ENST00000356657 PSPHP1O15172 72 aa6.94□□□□□ -1.3
FDPS-201ENST00000356657 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
FDPS-201ENST00000356657 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
FDPS-201ENST00000356657 A0A1B0GU33 70 aa6.9□□□□□ -1.31
FDPS-201ENST00000356657 A6NN06 94 aa6.9□□□□□ -1.31
FDPS-201ENST00000356657 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.31
FDPS-201ENST00000356657 MACF1Q9UPN3 7388 aaKnown RBP6.88□□□□□ -1.31
FDPS-201ENST00000356657 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.31
FDPS-201ENST00000356657 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
FDPS-201ENST00000356657 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
FDPS-201ENST00000356657 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
FDPS-201ENST00000356657 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
FDPS-201ENST00000356657 A6NED7 52 aa6.73□□□□□ -1.33
FDPS-201ENST00000356657 UQCR11O14957 56 aa6.7□□□□□ -1.34
FDPS-201ENST00000356657 MT1XP80297 61 aa6.69□□□□□ -1.34
FDPS-201ENST00000356657 A0A0D9SG42 100 aa6.67□□□□□ -1.34
FDPS-201ENST00000356657 BRK1Q8WUW1 75 aa6.65□□□□□ -1.35
FDPS-201ENST00000356657 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
FDPS-201ENST00000356657 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
FDPS-201ENST00000356657 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
FDPS-201ENST00000356657 A8MU10 97 aa6.59□□□□□ -1.36
FDPS-201ENST00000356657 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
FDPS-201ENST00000356657 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.36
FDPS-201ENST00000356657 KRTAP6-3Q3LI67 103 aa6.57□□□□□ -1.36
FDPS-201ENST00000356657 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
FDPS-201ENST00000356657 PRO0628Q9UI54 55 aa6.51□□□□□ -1.37
FDPS-201ENST00000356657 K7ERS5 55 aa6.41□□□□□ -1.38
FDPS-201ENST00000356657 KRTAP10-12P60413 245 aa6.4□□□□□ -1.39
FDPS-201ENST00000356657 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
FDPS-201ENST00000356657 NEBP20929 6669 aa6.35□□□□□ -1.39
FDPS-201ENST00000356657 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
FDPS-201ENST00000356657 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
FDPS-201ENST00000356657 KMT2DO14686 5537 aa6.29□□□□□ -1.4
FDPS-201ENST00000356657 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
FDPS-201ENST00000356657 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
FDPS-201ENST00000356657 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
FDPS-201ENST00000356657 TNP1P09430 55 aa6.23□□□□□ -1.41
FDPS-201ENST00000356657 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
FDPS-201ENST00000356657 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
FDPS-201ENST00000356657 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
FDPS-201ENST00000356657 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
FDPS-201ENST00000356657 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
FDPS-201ENST00000356657 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
FDPS-201ENST00000356657 SPRR2EP22531 72 aa6.11□□□□□ -1.43
FDPS-201ENST00000356657 SPRR2BP35325 72 aa6.11□□□□□ -1.43
FDPS-201ENST00000356657 SPRR2AP35326 72 aa6.11□□□□□ -1.43
FDPS-201ENST00000356657 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
FDPS-201ENST00000356657 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
FDPS-201ENST00000356657 ROMO1P60602 79 aa6.07□□□□□ -1.44
FDPS-201ENST00000356657 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
FDPS-201ENST00000356657 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
FDPS-201ENST00000356657 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms