RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 V9GYY9 64 aa8.93□□□□□ -0.98
PDLIM7-202ENST00000355841 M0R2T5 61 aa8.92□□□□□ -0.98
PDLIM7-202ENST00000355841 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
PDLIM7-202ENST00000355841 LOC101927531A0A1B0GV80 90 aa8.82□□□□□ -1
PDLIM7-202ENST00000355841 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
PDLIM7-202ENST00000355841 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
PDLIM7-202ENST00000355841 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
PDLIM7-202ENST00000355841 COA5Q86WW8 74 aa8.77□□□□□ -1.01
PDLIM7-202ENST00000355841 KRTAP3-1Q9BYR8 98 aa8.75□□□□□ -1.01
PDLIM7-202ENST00000355841 PSPHP1O15172 72 aa8.72□□□□□ -1.01
PDLIM7-202ENST00000355841 A8MUN3 132 aa8.7□□□□□ -1.02
PDLIM7-202ENST00000355841 Q5VV11 94 aa8.69□□□□□ -1.02
PDLIM7-202ENST00000355841 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
PDLIM7-202ENST00000355841 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
PDLIM7-202ENST00000355841 LINC01558Q9Y6Z2 57 aa8.62□□□□□ -1.03
PDLIM7-202ENST00000355841 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
PDLIM7-202ENST00000355841 S4R3F8 94 aa8.58□□□□□ -1.04
PDLIM7-202ENST00000355841 LCA10Q71F78 164 aa8.56□□□□□ -1.04
PDLIM7-202ENST00000355841 MT2AP02795 61 aa8.55□□□□□ -1.04
PDLIM7-202ENST00000355841 ACYP2P14621 99 aa8.55□□□□□ -1.04
PDLIM7-202ENST00000355841 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
PDLIM7-202ENST00000355841 KRTAP9-2Q9BYQ4 174 aa8.53□□□□□ -1.04
PDLIM7-202ENST00000355841 MT1FP04733 61 aa8.49□□□□□ -1.05
PDLIM7-202ENST00000355841 A6NED7 52 aa8.49□□□□□ -1.05
PDLIM7-202ENST00000355841 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
PDLIM7-202ENST00000355841 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.05
PDLIM7-202ENST00000355841 KRTAP10-10P60014 251 aa8.46□□□□□ -1.06
PDLIM7-202ENST00000355841 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.06
PDLIM7-202ENST00000355841 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
PDLIM7-202ENST00000355841 PMAIP1Q13794 54 aa8.4□□□□□ -1.07
PDLIM7-202ENST00000355841 A8MU10 97 aa8.39□□□□□ -1.07
PDLIM7-202ENST00000355841 FSIP2Q5CZC0 6907 aa8.33□□□□□ -1.08
PDLIM7-202ENST00000355841 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
PDLIM7-202ENST00000355841 SPTSSBQ8NFR3 76 aa8.31□□□□□ -1.08
PDLIM7-202ENST00000355841 SEC61GP60059 68 aa8.29□□□□□ -1.08
PDLIM7-202ENST00000355841 A0A1B0GU69 56 aa8.27□□□□□ -1.08
PDLIM7-202ENST00000355841 A6NN06 94 aa8.27□□□□□ -1.09
PDLIM7-202ENST00000355841 KTN1-AS1Q86SY8 53 aa8.25□□□□□ -1.09
PDLIM7-202ENST00000355841 LCE2BO14633 110 aa8.23□□□□□ -1.09
PDLIM7-202ENST00000355841 USH2AO75445 5202 aa8.2□□□□□ -1.1
PDLIM7-202ENST00000355841 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
PDLIM7-202ENST00000355841 UQCR11O14957 56 aa8.15□□□□□ -1.1
PDLIM7-202ENST00000355841 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
PDLIM7-202ENST00000355841 H0YAA0 97 aa8.13□□□□□ -1.11
PDLIM7-202ENST00000355841 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
PDLIM7-202ENST00000355841 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
PDLIM7-202ENST00000355841 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
PDLIM7-202ENST00000355841 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
PDLIM7-202ENST00000355841 P0C880 135 aa8.04□□□□□ -1.12
PDLIM7-202ENST00000355841 SSPOA2VEC9 5147 aa8.03□□□□□ -1.12
PDLIM7-202ENST00000355841 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
PDLIM7-202ENST00000355841 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
PDLIM7-202ENST00000355841 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
PDLIM7-202ENST00000355841 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
PDLIM7-202ENST00000355841 MT1BP07438 61 aa7.89□□□□□ -1.15
PDLIM7-202ENST00000355841 R4GN34 69 aa7.88□□□□□ -1.15
PDLIM7-202ENST00000355841 M0QZ58 72 aa7.86□□□□□ -1.15
PDLIM7-202ENST00000355841 A0A1B0GU33 70 aa7.83□□□□□ -1.16
PDLIM7-202ENST00000355841 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
PDLIM7-202ENST00000355841 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
PDLIM7-202ENST00000355841 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
PDLIM7-202ENST00000355841 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
PDLIM7-202ENST00000355841 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
PDLIM7-202ENST00000355841 K7ERS5 55 aa7.65□□□□□ -1.18
PDLIM7-202ENST00000355841 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PDLIM7-202ENST00000355841 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
PDLIM7-202ENST00000355841 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
PDLIM7-202ENST00000355841 MT1XP80297 61 aa7.51□□□□□ -1.21
PDLIM7-202ENST00000355841 A0A0D9SG42 100 aa7.5□□□□□ -1.21
PDLIM7-202ENST00000355841 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
PDLIM7-202ENST00000355841 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
PDLIM7-202ENST00000355841 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
PDLIM7-202ENST00000355841 ROMO1P60602 79 aa7.42□□□□□ -1.22
PDLIM7-202ENST00000355841 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
PDLIM7-202ENST00000355841 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
PDLIM7-202ENST00000355841 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
PDLIM7-202ENST00000355841 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
PDLIM7-202ENST00000355841 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
PDLIM7-202ENST00000355841 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
PDLIM7-202ENST00000355841 KMT2DO14686 5537 aa7.23□□□□□ -1.25
PDLIM7-202ENST00000355841 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
PDLIM7-202ENST00000355841 H3BS24 57 aa7.16□□□□□ -1.26
PDLIM7-202ENST00000355841 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
PDLIM7-202ENST00000355841 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
PDLIM7-202ENST00000355841 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
PDLIM7-202ENST00000355841 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
PDLIM7-202ENST00000355841 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
PDLIM7-202ENST00000355841 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
PDLIM7-202ENST00000355841 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
PDLIM7-202ENST00000355841 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
PDLIM7-202ENST00000355841 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
PDLIM7-202ENST00000355841 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
PDLIM7-202ENST00000355841 TNP1P09430 55 aa6.83□□□□□ -1.32
PDLIM7-202ENST00000355841 NEBP20929 6669 aa6.83□□□□□ -1.32
PDLIM7-202ENST00000355841 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
PDLIM7-202ENST00000355841 SPRR2EP22531 72 aa6.73□□□□□ -1.33
PDLIM7-202ENST00000355841 SPRR2BP35325 72 aa6.73□□□□□ -1.33
PDLIM7-202ENST00000355841 SPRR2AP35326 72 aa6.73□□□□□ -1.33
PDLIM7-202ENST00000355841 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
PDLIM7-202ENST00000355841 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms