RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 H3BPC8 53 aa7.85□□□□□ -1.15
PDLIM7-201ENST00000355572 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
PDLIM7-201ENST00000355572 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
PDLIM7-201ENST00000355572 TMEM258P61165 79 aa7.83□□□□□ -1.16
PDLIM7-201ENST00000355572 C4orf26Q17RF5 130 aa7.83□□□□□ -1.16
PDLIM7-201ENST00000355572 MP68P56378 58 aa7.8□□□□□ -1.16
PDLIM7-201ENST00000355572 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
PDLIM7-201ENST00000355572 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
PDLIM7-201ENST00000355572 H0Y9P7 68 aa7.76□□□□□ -1.17
PDLIM7-201ENST00000355572 H7BZZ5 65 aa7.76□□□□□ -1.17
PDLIM7-201ENST00000355572 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
PDLIM7-201ENST00000355572 ATP5EP56381 51 aaPredicted RBP7.75□□□□□ -1.17
PDLIM7-201ENST00000355572 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
PDLIM7-201ENST00000355572 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
PDLIM7-201ENST00000355572 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
PDLIM7-201ENST00000355572 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
PDLIM7-201ENST00000355572 LOC101927531A0A1B0GV80 90 aa7.65□□□□□ -1.18
PDLIM7-201ENST00000355572 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
PDLIM7-201ENST00000355572 LCA10Q71F78 164 aa7.63□□□□□ -1.19
PDLIM7-201ENST00000355572 SPANXA2-OT1Q8N9U9 137 aa7.62□□□□□ -1.19
PDLIM7-201ENST00000355572 S4R3F8 94 aa7.61□□□□□ -1.19
PDLIM7-201ENST00000355572 MT1BP07438 61 aa7.59□□□□□ -1.19
PDLIM7-201ENST00000355572 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
PDLIM7-201ENST00000355572 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
PDLIM7-201ENST00000355572 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
PDLIM7-201ENST00000355572 SERP1Q9Y6X1 66 aa7.56□□□□□ -1.2
PDLIM7-201ENST00000355572 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
PDLIM7-201ENST00000355572 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
PDLIM7-201ENST00000355572 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
PDLIM7-201ENST00000355572 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
PDLIM7-201ENST00000355572 Q5VV11 94 aa7.42□□□□□ -1.22
PDLIM7-201ENST00000355572 A6NN06 94 aa7.38□□□□□ -1.23
PDLIM7-201ENST00000355572 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
PDLIM7-201ENST00000355572 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
PDLIM7-201ENST00000355572 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
PDLIM7-201ENST00000355572 A8MUN3 132 aa7.33□□□□□ -1.24
PDLIM7-201ENST00000355572 ACYP2P14621 99 aa7.32□□□□□ -1.24
PDLIM7-201ENST00000355572 COA5Q86WW8 74 aa7.32□□□□□ -1.24
PDLIM7-201ENST00000355572 V9GYY9 64 aa7.24□□□□□ -1.25
PDLIM7-201ENST00000355572 H0YAA0 97 aa7.21□□□□□ -1.26
PDLIM7-201ENST00000355572 Q1T7F1 81 aa7.21□□□□□ -1.26
PDLIM7-201ENST00000355572 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
PDLIM7-201ENST00000355572 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
PDLIM7-201ENST00000355572 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
PDLIM7-201ENST00000355572 NEBP20929 6669 aa7.17□□□□□ -1.26
PDLIM7-201ENST00000355572 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
PDLIM7-201ENST00000355572 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
PDLIM7-201ENST00000355572 SPTSSBQ8NFR3 76 aa7.12□□□□□ -1.27
PDLIM7-201ENST00000355572 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
PDLIM7-201ENST00000355572 P0C880 135 aa7.08□□□□□ -1.28
PDLIM7-201ENST00000355572 MT1XP80297 61 aa7.08□□□□□ -1.28
PDLIM7-201ENST00000355572 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
PDLIM7-201ENST00000355572 KMT2DO14686 5537 aa7.02□□□□□ -1.29
PDLIM7-201ENST00000355572 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
PDLIM7-201ENST00000355572 PSPHP1O15172 72 aa6.95□□□□□ -1.3
PDLIM7-201ENST00000355572 KRTAP20-1Q3LI63 56 aa6.93□□□□□ -1.3
PDLIM7-201ENST00000355572 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
PDLIM7-201ENST00000355572 A0A1B0GU69 56 aa6.92□□□□□ -1.3
PDLIM7-201ENST00000355572 M0QZ58 72 aa6.92□□□□□ -1.3
PDLIM7-201ENST00000355572 R4GN34 69 aa6.92□□□□□ -1.3
PDLIM7-201ENST00000355572 MDN1Q9NU22 5596 aa6.92□□□□□ -1.3
PDLIM7-201ENST00000355572 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
PDLIM7-201ENST00000355572 SEC61GP60059 68 aa6.88□□□□□ -1.31
PDLIM7-201ENST00000355572 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
PDLIM7-201ENST00000355572 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
PDLIM7-201ENST00000355572 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
PDLIM7-201ENST00000355572 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
PDLIM7-201ENST00000355572 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
PDLIM7-201ENST00000355572 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
PDLIM7-201ENST00000355572 A6NED7 52 aa6.8□□□□□ -1.32
PDLIM7-201ENST00000355572 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
PDLIM7-201ENST00000355572 SPRR2EP22531 72 aa6.79□□□□□ -1.32
PDLIM7-201ENST00000355572 SPRR2BP35325 72 aa6.79□□□□□ -1.32
PDLIM7-201ENST00000355572 SPRR2AP35326 72 aa6.79□□□□□ -1.32
PDLIM7-201ENST00000355572 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
PDLIM7-201ENST00000355572 BRK1Q8WUW1 75 aa6.78□□□□□ -1.32
PDLIM7-201ENST00000355572 UQCR11O14957 56 aa6.76□□□□□ -1.33
PDLIM7-201ENST00000355572 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
PDLIM7-201ENST00000355572 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
PDLIM7-201ENST00000355572 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
PDLIM7-201ENST00000355572 KRTAP2-3P0C7H8 128 aa6.71□□□□□ -1.34
PDLIM7-201ENST00000355572 KRTAP2-4Q9BYR9 128 aa6.71□□□□□ -1.34
PDLIM7-201ENST00000355572 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
PDLIM7-201ENST00000355572 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
PDLIM7-201ENST00000355572 A0A1B0GU33 70 aa6.67□□□□□ -1.34
PDLIM7-201ENST00000355572 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
PDLIM7-201ENST00000355572 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
PDLIM7-201ENST00000355572 SPRR2DP22532 72 aa6.55□□□□□ -1.36
PDLIM7-201ENST00000355572 A8MU10 97 aa6.54□□□□□ -1.36
PDLIM7-201ENST00000355572 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
PDLIM7-201ENST00000355572 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
PDLIM7-201ENST00000355572 K7ERS5 55 aa6.41□□□□□ -1.38
PDLIM7-201ENST00000355572 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
PDLIM7-201ENST00000355572 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
PDLIM7-201ENST00000355572 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
PDLIM7-201ENST00000355572 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
PDLIM7-201ENST00000355572 A0A0D9SG42 100 aa6.32□□□□□ -1.4
PDLIM7-201ENST00000355572 MT1EP04732 61 aa6.26□□□□□ -1.41
PDLIM7-201ENST00000355572 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
PDLIM7-201ENST00000355572 KTN1-AS1Q86SY8 53 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms