RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 RBM12B-AS1Q9P1G2 102 aa12.94□□□□□ -0.34
CLK2-201ENST00000355560 HERC1Q15751 4861 aa12.94□□□□□ -0.34
CLK2-201ENST00000355560 A6NED7 52 aa12.94□□□□□ -0.34
CLK2-201ENST00000355560 LCA10Q71F78 164 aa12.91□□□□□ -0.34
CLK2-201ENST00000355560 H1FX-AS1Q4G0G2 97 aa12.89□□□□□ -0.35
CLK2-201ENST00000355560 S4R3F8 94 aa12.89□□□□□ -0.35
CLK2-201ENST00000355560 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
CLK2-201ENST00000355560 SEC61GP60059 68 aa12.85□□□□□ -0.35
CLK2-201ENST00000355560 KRTAP4-1Q9BYQ7 146 aa12.84□□□□□ -0.35
CLK2-201ENST00000355560 PRO0628Q9UI54 55 aa12.84□□□□□ -0.35
CLK2-201ENST00000355560 MUC17Q685J3 4493 aa12.81□□□□□ -0.36
CLK2-201ENST00000355560 HMCN2Q8NDA2 5059 aa12.79□□□□□ -0.36
CLK2-201ENST00000355560 A8MU10 97 aa12.79□□□□□ -0.36
CLK2-201ENST00000355560 CDC42SE1Q9NRR8 79 aa12.71□□□□□ -0.37
CLK2-201ENST00000355560 UQCR11O14957 56 aa12.68□□□□□ -0.38
CLK2-201ENST00000355560 MIR22HGQ0VDD5 57 aa12.56□□□□□ -0.4
CLK2-201ENST00000355560 MUC2Q02817 5179 aa12.56□□□□□ -0.4
CLK2-201ENST00000355560 CSAG1Q6PB30 78 aa12.55□□□□□ -0.4
CLK2-201ENST00000355560 SPATA8Q6RVD6 105 aa12.54□□□□□ -0.4
CLK2-201ENST00000355560 A0A1B0GU33 70 aa12.53□□□□□ -0.4
CLK2-201ENST00000355560 KRTAP19-2Q3LHN2 52 aa12.51□□□□□ -0.41
CLK2-201ENST00000355560 KRTAP10-6P60371 365 aaPredicted RBP12.49□□□□□ -0.41
CLK2-201ENST00000355560 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
CLK2-201ENST00000355560 H0YAA0 97 aa12.43□□□□□ -0.42
CLK2-201ENST00000355560 ADM2Q7Z4H4 148 aa12.38□□□□□ -0.43
CLK2-201ENST00000355560 P0C880 135 aa12.37□□□□□ -0.43
CLK2-201ENST00000355560 PMAIP1Q13794 54 aa12.31□□□□□ -0.44
CLK2-201ENST00000355560 UBR4Q5T4S7 5183 aa12.25□□□□□ -0.45
CLK2-201ENST00000355560 KRTAP13-4Q3LI77 160 aa12.22□□□□□ -0.45
CLK2-201ENST00000355560 FLGP20930 4061 aaPredicted RBP12.17□□□□□ -0.46
CLK2-201ENST00000355560 A6NN06 94 aa12.17□□□□□ -0.46
CLK2-201ENST00000355560 RNF213Q63HN8 5207 aa12.12□□□□□ -0.47
CLK2-201ENST00000355560 LCE2CQ5TA81 110 aa12.1□□□□□ -0.47
CLK2-201ENST00000355560 A0A0D9SG42 100 aa12.05□□□□□ -0.48
CLK2-201ENST00000355560 FAT4Q6V0I7 4981 aa12.04□□□□□ -0.48
CLK2-201ENST00000355560 M0QZ58 72 aa12.01□□□□□ -0.49
CLK2-201ENST00000355560 R4GN34 69 aa11.92□□□□□ -0.5
CLK2-201ENST00000355560 K7ERS5 55 aa11.92□□□□□ -0.5
CLK2-201ENST00000355560 LORP23490 312 aaPredicted RBP11.9□□□□□ -0.5
CLK2-201ENST00000355560 KTN1-AS1Q86SY8 53 aa11.86□□□□□ -0.51
CLK2-201ENST00000355560 MT1HP80294 61 aa11.86□□□□□ -0.51
CLK2-201ENST00000355560 M0R2T5 61 aa11.81□□□□□ -0.52
CLK2-201ENST00000355560 LINC01554Q52M75 96 aa11.77□□□□□ -0.52
CLK2-201ENST00000355560 KRTAP12-2P59991 146 aa11.76□□□□□ -0.53
CLK2-201ENST00000355560 KRTAP12-1P59990 96 aa11.74□□□□□ -0.53
CLK2-201ENST00000355560 SPINT4Q6UDR6 99 aa11.72□□□□□ -0.53
CLK2-201ENST00000355560 CRIPTQ9P021 101 aa11.62□□□□□ -0.55
CLK2-201ENST00000355560 PRAC1Q96KF2 57 aa11.54□□□□□ -0.56
CLK2-201ENST00000355560 ROMO1P60602 79 aa11.48□□□□□ -0.57
CLK2-201ENST00000355560 MT2AP02795 61 aa11.45□□□□□ -0.58
CLK2-201ENST00000355560 KRTAP9-8Q9BYQ0 159 aa11.45□□□□□ -0.58
CLK2-201ENST00000355560 MT1FP04733 61 aa11.42□□□□□ -0.58
CLK2-201ENST00000355560 KRTAP10-10P60014 251 aa11.39□□□□□ -0.59
CLK2-201ENST00000355560 SPRR2GQ9BYE4 73 aa11.35□□□□□ -0.59
CLK2-201ENST00000355560 KRTAP19-1Q8IUB9 90 aa11.32□□□□□ -0.6
CLK2-201ENST00000355560 CAMK2N1Q7Z7J9 78 aa11.21□□□□□ -0.62
CLK2-201ENST00000355560 KRTAP25-1Q3LHN0 102 aa11.15□□□□□ -0.62
CLK2-201ENST00000355560 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
CLK2-201ENST00000355560 C10orf95Q9H7T3 257 aa11.1□□□□□ -0.63
CLK2-201ENST00000355560 PLAC4Q8WY50 150 aa11.05□□□□□ -0.64
CLK2-201ENST00000355560 KRTAP9-3Q9BYQ3 159 aa11.02□□□□□ -0.65
CLK2-201ENST00000355560 KRTAP19-8Q3LI54 63 aa10.98□□□□□ -0.65
CLK2-201ENST00000355560 MT1BP07438 61 aa10.85□□□□□ -0.67
CLK2-201ENST00000355560 LCE2BO14633 110 aa10.69□□□□□ -0.7
CLK2-201ENST00000355560 TNP1P09430 55 aa10.68□□□□□ -0.7
CLK2-201ENST00000355560 MT1XP80297 61 aa10.58□□□□□ -0.72
CLK2-201ENST00000355560 KRTAP10-5P60370 271 aa10.57□□□□□ -0.72
CLK2-201ENST00000355560 PP632Q6XCG6 107 aa10.5□□□□□ -0.73
CLK2-201ENST00000355560 USH2AO75445 5202 aa10.42□□□□□ -0.74
CLK2-201ENST00000355560 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
CLK2-201ENST00000355560 KRTAP23-1A1A580 65 aa10.36□□□□□ -0.75
CLK2-201ENST00000355560 LCE3AQ5TA76 89 aa10.21□□□□□ -0.77
CLK2-201ENST00000355560 KRTAP10-7P60409 375 aaPredicted RBP10.2□□□□□ -0.78
CLK2-201ENST00000355560 KRTAP10-12P60413 245 aa10.15□□□□□ -0.79
CLK2-201ENST00000355560 SSPOA2VEC9 5147 aa10□□□□□ -0.81
CLK2-201ENST00000355560 KRTAP8-1Q8IUC2 63 aa9.97□□□□□ -0.81
CLK2-201ENST00000355560 FSIP2Q5CZC0 6907 aa9.95□□□□□ -0.82
CLK2-201ENST00000355560 LCE2DQ5TA82 110 aaPredicted RBP9.95□□□□□ -0.82
CLK2-201ENST00000355560 KRTAP15-1Q3LI76 137 aa9.93□□□□□ -0.82
CLK2-201ENST00000355560 KRTAP19-6Q3LI70 58 aa9.91□□□□□ -0.82
CLK2-201ENST00000355560 KRTAP12-3P60328 96 aa9.78□□□□□ -0.84
CLK2-201ENST00000355560 KMT2DO14686 5537 aa9.78□□□□□ -0.84
CLK2-201ENST00000355560 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
CLK2-201ENST00000355560 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
CLK2-201ENST00000355560 KRTAP19-5Q3LI72 72 aa9.64□□□□□ -0.87
CLK2-201ENST00000355560 FCGBPQ9Y6R7 5405 aaPredicted RBP9.49□□□□□ -0.89
CLK2-201ENST00000355560 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
CLK2-201ENST00000355560 SPRR5A0A1B0GTR4 108 aa9.44□□□□□ -0.9
CLK2-201ENST00000355560 KRTAP19-7Q3SYF9 63 aa9.43□□□□□ -0.9
CLK2-201ENST00000355560 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
CLK2-201ENST00000355560 H3BS24 57 aa9.32□□□□□ -0.92
CLK2-201ENST00000355560 LUZP6Q538Z0 58 aa9.29□□□□□ -0.92
CLK2-201ENST00000355560 MT1EP04732 61 aa9.24□□□□□ -0.93
CLK2-201ENST00000355560 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
CLK2-201ENST00000355560 LCE3CQ5T5A8 94 aa9.14□□□□□ -0.95
CLK2-201ENST00000355560 MT1LQ93083 61 aa9.1□□□□□ -0.95
CLK2-201ENST00000355560 MACF1Q9UPN3 7388 aaKnown RBP9.08□□□□□ -0.96
CLK2-201ENST00000355560 KRTAP19-4Q3LI73 84 aa8.96□□□□□ -0.97
CLK2-201ENST00000355560 KRTAP4-7Q9BYR0 210 aa8.93□□□□□ -0.98
CLK2-201ENST00000355560 MUC12Q9UKN1 5478 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms