RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 HMCN2Q8NDA2 5059 aa11.46□□□□□ -0.58
SCAMP3-202ENST00000355379 HERC1Q15751 4861 aa11.45□□□□□ -0.58
SCAMP3-202ENST00000355379 Q5VV11 94 aa11.44□□□□□ -0.58
SCAMP3-202ENST00000355379 S4R3F8 94 aa11.43□□□□□ -0.58
SCAMP3-202ENST00000355379 LCA10Q71F78 164 aa11.39□□□□□ -0.59
SCAMP3-202ENST00000355379 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
SCAMP3-202ENST00000355379 A0A1B0GU69 56 aa11.37□□□□□ -0.59
SCAMP3-202ENST00000355379 SEC61GP60059 68 aa11.28□□□□□ -0.6
SCAMP3-202ENST00000355379 KRTAP19-2Q3LHN2 52 aa11.24□□□□□ -0.61
SCAMP3-202ENST00000355379 A6NED7 52 aa11.17□□□□□ -0.62
SCAMP3-202ENST00000355379 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
SCAMP3-202ENST00000355379 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
SCAMP3-202ENST00000355379 UQCR11O14957 56 aa11.06□□□□□ -0.64
SCAMP3-202ENST00000355379 CDC42SE1Q9NRR8 79 aa11.03□□□□□ -0.64
SCAMP3-202ENST00000355379 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
SCAMP3-202ENST00000355379 KRTAP10-6P60371 365 aaPredicted RBP11□□□□□ -0.65
SCAMP3-202ENST00000355379 A0A1B0GU33 70 aa10.99□□□□□ -0.65
SCAMP3-202ENST00000355379 PRO0628Q9UI54 55 aa10.99□□□□□ -0.65
SCAMP3-202ENST00000355379 H0YAA0 97 aa10.98□□□□□ -0.65
SCAMP3-202ENST00000355379 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
SCAMP3-202ENST00000355379 MIR22HGQ0VDD5 57 aa10.94□□□□□ -0.66
SCAMP3-202ENST00000355379 ADM2Q7Z4H4 148 aa10.93□□□□□ -0.66
SCAMP3-202ENST00000355379 A8MU10 97 aa10.9□□□□□ -0.66
SCAMP3-202ENST00000355379 LCE2CQ5TA81 110 aa10.9□□□□□ -0.66
SCAMP3-202ENST00000355379 FLGP20930 4061 aaPredicted RBP10.9□□□□□ -0.67
SCAMP3-202ENST00000355379 MUC2Q02817 5179 aa10.89□□□□□ -0.67
SCAMP3-202ENST00000355379 P0C880 135 aa10.87□□□□□ -0.67
SCAMP3-202ENST00000355379 RNF213Q63HN8 5207 aa10.82□□□□□ -0.68
SCAMP3-202ENST00000355379 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
SCAMP3-202ENST00000355379 KRTAP13-4Q3LI77 160 aa10.69□□□□□ -0.7
SCAMP3-202ENST00000355379 M0QZ58 72 aa10.67□□□□□ -0.7
SCAMP3-202ENST00000355379 MT1HP80294 61 aa10.67□□□□□ -0.7
SCAMP3-202ENST00000355379 M0R2T5 61 aa10.55□□□□□ -0.72
SCAMP3-202ENST00000355379 PMAIP1Q13794 54 aa10.53□□□□□ -0.72
SCAMP3-202ENST00000355379 FAT4Q6V0I7 4981 aa10.52□□□□□ -0.72
SCAMP3-202ENST00000355379 R4GN34 69 aa10.52□□□□□ -0.73
SCAMP3-202ENST00000355379 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
SCAMP3-202ENST00000355379 A6NN06 94 aa10.48□□□□□ -0.73
SCAMP3-202ENST00000355379 A0A0D9SG42 100 aa10.48□□□□□ -0.73
SCAMP3-202ENST00000355379 CRIPTQ9P021 101 aa10.46□□□□□ -0.74
SCAMP3-202ENST00000355379 K7ERS5 55 aa10.43□□□□□ -0.74
SCAMP3-202ENST00000355379 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
SCAMP3-202ENST00000355379 KRTAP12-1P59990 96 aa10.32□□□□□ -0.76
SCAMP3-202ENST00000355379 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
SCAMP3-202ENST00000355379 MT2AP02795 61 aa10.28□□□□□ -0.76
SCAMP3-202ENST00000355379 LINC01554Q52M75 96 aa10.28□□□□□ -0.76
SCAMP3-202ENST00000355379 KRTAP12-2P59991 146 aa10.28□□□□□ -0.76
SCAMP3-202ENST00000355379 SPINT4Q6UDR6 99 aa10.24□□□□□ -0.77
SCAMP3-202ENST00000355379 MT1FP04733 61 aa10.21□□□□□ -0.78
SCAMP3-202ENST00000355379 KRTAP10-10P60014 251 aa10.19□□□□□ -0.78
SCAMP3-202ENST00000355379 SPRR2GQ9BYE4 73 aa10.18□□□□□ -0.78
SCAMP3-202ENST00000355379 LCE2AQ5TA79 106 aaPredicted RBP10.17□□□□□ -0.78
SCAMP3-202ENST00000355379 KTN1-AS1Q86SY8 53 aa10.16□□□□□ -0.78
SCAMP3-202ENST00000355379 KRTAP19-1Q8IUB9 90 aa10.11□□□□□ -0.79
SCAMP3-202ENST00000355379 ROMO1P60602 79 aa10.02□□□□□ -0.8
SCAMP3-202ENST00000355379 KRTAP9-3Q9BYQ3 159 aa9.93□□□□□ -0.82
SCAMP3-202ENST00000355379 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
SCAMP3-202ENST00000355379 CAMK2N1Q7Z7J9 78 aa9.87□□□□□ -0.83
SCAMP3-202ENST00000355379 PLAC4Q8WY50 150 aa9.86□□□□□ -0.83
SCAMP3-202ENST00000355379 PRAC1Q96KF2 57 aa9.82□□□□□ -0.84
SCAMP3-202ENST00000355379 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
SCAMP3-202ENST00000355379 MT1BP07438 61 aa9.72□□□□□ -0.85
SCAMP3-202ENST00000355379 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
SCAMP3-202ENST00000355379 LCE2BO14633 110 aa9.61□□□□□ -0.87
SCAMP3-202ENST00000355379 TNP1P09430 55 aa9.45□□□□□ -0.9
SCAMP3-202ENST00000355379 MT1XP80297 61 aa9.43□□□□□ -0.9
SCAMP3-202ENST00000355379 KRTAP10-5P60370 271 aa9.42□□□□□ -0.9
SCAMP3-202ENST00000355379 PRO2289Q9P1D8 64 aa9.34□□□□□ -0.91
SCAMP3-202ENST00000355379 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
SCAMP3-202ENST00000355379 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
SCAMP3-202ENST00000355379 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
SCAMP3-202ENST00000355379 USH2AO75445 5202 aa9.2□□□□□ -0.94
SCAMP3-202ENST00000355379 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
SCAMP3-202ENST00000355379 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
SCAMP3-202ENST00000355379 LCE3AQ5TA76 89 aa9□□□□□ -0.97
SCAMP3-202ENST00000355379 KRTAP10-12P60413 245 aa8.99□□□□□ -0.97
SCAMP3-202ENST00000355379 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
SCAMP3-202ENST00000355379 KRTAP8-1Q8IUC2 63 aa8.86□□□□□ -0.99
SCAMP3-202ENST00000355379 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
SCAMP3-202ENST00000355379 KRTAP12-3P60328 96 aa8.64□□□□□ -1.03
SCAMP3-202ENST00000355379 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
SCAMP3-202ENST00000355379 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
SCAMP3-202ENST00000355379 KRTAP15-1Q3LI76 137 aa8.55□□□□□ -1.04
SCAMP3-202ENST00000355379 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
SCAMP3-202ENST00000355379 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.05
SCAMP3-202ENST00000355379 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
SCAMP3-202ENST00000355379 CRCT1Q9UGL9 99 aa8.44□□□□□ -1.06
SCAMP3-202ENST00000355379 KMT2DO14686 5537 aa8.44□□□□□ -1.06
SCAMP3-202ENST00000355379 KRTAP19-7Q3SYF9 63 aa8.41□□□□□ -1.06
SCAMP3-202ENST00000355379 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
SCAMP3-202ENST00000355379 MT1EP04732 61 aa8.27□□□□□ -1.09
SCAMP3-202ENST00000355379 KRTAP19-4Q3LI73 84 aa8.19□□□□□ -1.1
SCAMP3-202ENST00000355379 MT1LQ93083 61 aa8.12□□□□□ -1.11
SCAMP3-202ENST00000355379 LCE3CQ5T5A8 94 aa8.09□□□□□ -1.11
SCAMP3-202ENST00000355379 MACF1Q9UPN3 7388 aaKnown RBP8.02□□□□□ -1.13
SCAMP3-202ENST00000355379 LUZP6Q538Z0 58 aa8.01□□□□□ -1.13
SCAMP3-202ENST00000355379 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
SCAMP3-202ENST00000355379 SPRR2FQ96RM1 72 aa7.98□□□□□ -1.13
SCAMP3-202ENST00000355379 KRTAP19-3Q7Z4W3 81 aa7.92□□□□□ -1.14
SCAMP3-202ENST00000355379 KRTAP5-9P26371 169 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms